Baojian Chen

Baojian Chen

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Baojian Chen

Bioscience, Wageningen University and Research, 6700 AA Wageningen, The Netherlands

Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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22 August 2017 in Plant Physiology
Verified
Journal Article
Closed access
PDF file
AHAnneke Horstman
Anneke Horstman
MLMengfan Li
Mengfan Li
IHIris Heidmann
Iris Heidmann
MWMieke Weemen
Mieke Weemen
BCBaojian Chen
Baojian Chen
KBKim Boutilier
Kim Boutilier
Somatic embryogenesis is an example of induced cellular totipotency, where embryos develop from vegetative cells rather than from gamete fusion. Somatic embryogenesis can be induced in vitro by exposing explants to growth regulators and/or stress treatments. The BABY BOOM (BBM) and LEAFY COTYLEDON1 (LEC1) and LEC2 transcription factors are key regulators of plant cell totipotency, as ectopic overexpression of either transcription factor induces somatic embryo formation from Arabidopsis (Arabidopsis thaliana) seedlings without exogenous growth regulators or stress treatments. Although LEC and BBM proteins regulate the same developmental process, it is not known whether they function in the same molecular pathway. We show that BBM transcriptionally regulates LEC1 and LEC2, as well as the two other LAFL genes, FUSCA3 (FUS3) and ABSCISIC ACIDINSENSITIVE3 (ABI3). LEC2 and ABI3 quantitatively regulate BBM-mediated somatic embryogenesis, while FUS3 and LEC1 are essential for this process. BBM-mediated somatic embryogenesis is dose and context dependent, and the context-dependent phenotypes are associated with differential LAFL expression. We also uncover functional redundancy for somatic embryogenesis among other Arabidopsis BBM-like proteins and show that one of these proteins, PLETHORA2, also regulates LAFL gene expression. Our data place BBM upstream of other major regulators of plant embryo identity and totipotency.

16 June 2022 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Open access
BCBaojian Chen
Baojian Chen
LMLena Maas
Lena Maas
DFDuarte Figueiredo
Duarte Figueiredo
YZYu Zhong
Yu Zhong
RRRicardo Reis
Ricardo Reis
KBKim Boutilier
Kim Boutilier
The BABY BOOM (BBM) AINTEGUMENTA-LIKE (AIL) AP2/ERF domain transcription factor is a major regulator of plant cell totipotency, as it induces asexual embryo formation when ectopically expressed. Surprisingly, only limited information is available on the role of BBM during zygotic embryogenesis. Here we reexamined BBM expression and function in the model plant Arabidopsis thaliana ( Arabidopsis ) using reporter analysis and newly developed CRISPR mutants. BBM was expressed in the embryo from the zygote stage and also in the maternal (nucellus) and filial (endosperm) seed tissues. Analysis of CRISPR mutant alleles for BBM ( bbm-cr ) and the redundantly acting AIL gene PLETHORA2 ( PLT2 ) ( plt2-cr ) uncovered individual roles for these genes in the timing of embryo progression. We also identified redundant roles for BBM and PLT2 in endosperm proliferation and cellularization and the maintenance of zygotic embryo development. Finally, we show that ectopic BBM expression in the egg cell of Arabidopsis and the dicot crops Brassica napus and Solanum lycopersicon is sufficient to bypass the fertilization requirement for embryo development. Together these results highlight roles for BBM and PLT2 in seed development and demonstrate the utility of BBM genes for engineering asexual embryo development in dicot species.

1 December 2021 in Plant Physiology
Verified
Journal Article
Open access
PDF file
MLMengfan Li
Mengfan Li
JWJustyna Wrobel-Marek
Justyna Wrobel-Marek
IHIris Heidmann
Iris Heidmann
AHAnneke Horstman
Anneke Horstman
BCBaojian Chen
Baojian Chen
KBKim Boutilier
Kim Boutilier
Somatic embryogenesis is a type of plant cell totipotency where embryos develop from nonreproductive (vegetative) cells without fertilization. Somatic embryogenesis can be induced in vitro by auxins, and by ectopic expression of embryo-expressed transcription factors like the BABY BOOM (BBM) AINTEGUMENTA-LIKE APETALA2/ETHYLENE RESPONSE FACTOR domain protein. These different pathways are thought to converge to promote auxin response and biosynthesis, but the specific roles of the endogenous auxin pathway in somatic embryogenesis induction have not been well-characterized. Here we show that BBM transcriptionally regulates the YUCCA3 (YUC3) and YUC8 auxin biosynthesis genes during BBM-mediated somatic embryogenesis in Arabidopsis (Arabidopsis thaliana) seedlings. BBM induced local and ectopic YUC3 and YUC8 expression in seedlings, which coincided with increased DR5 auxin response and indole-3-acetic acid (IAA) biosynthesis and with ectopic expression of the WOX2 embryo reporter. YUC-driven auxin biosynthesis was required for BBM-mediated somatic embryogenesis, as the number of embryogenic explants was reduced by ca. 50% in yuc3 yuc8 mutants and abolished after chemical inhibition of YUC enzyme activity. However, a detailed YUC inhibitor time-course study revealed that YUC-dependent IAA biosynthesis is not required for the re-initiation of totipotent cell identity in seedlings. Rather, YUC enzymes are required later in somatic embryo development for the maintenance of embryo identity and growth. This study resolves a long-standing question about the role of endogenous auxin biosynthesis in transcription factor-mediated somatic embryogenesis and also provides an experimental framework for understanding the role of endogenous auxin biosynthesis in other in planta and in vitro embryogenesis systems.

5 December 2021
Verified
Conference Paper
Open access
BCBaojian Chen
Baojian Chen
CLChanghe Li
Changhe Li
SZSanyou Zeng
Sanyou Zeng
Shengxiang YangShengxiang Yang
Shengxiang Yang
MMMichalis Mavrovouniotis
Michalis Mavrovouniotis
The research of vehicle routing problem (VRP) is significant for people traveling and logistics distribution. Recently, in order to alleviate global warming, the VRP based on electric vehicles has attracted much attention from researchers. In this paper, a bi-level routing problem model based on electric vehicles is presented, which can simulate the actual logistics distribution process. The classic backpropagation neural network is used to predict the road conditions for applying the method in real life. We also propose a local search algorithm based on a dynamic constrained multiobjective optimization framework. In this algorithm, 26 local search operators are designed and selected adaptively to optimize initial solutions. We also make a comparison between our algorithm and 3 modified algorithms. Experimental results indicate that our algorithm can attain an excellent solution that can satisfy the constraints of the VRP with real-time traffic conditions and be more competitive than the other 3 modified algorithms.