Darkhan Utepbergenov

Darkhan Utepbergenov

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Darkhan Utepbergenov

Department of Chemistry, School of Sciences and Humanities, Nazarbayev University, Astana, 010000, Kazakhstan

Research Focus & Metrics

Academic Career Length

33Years (1994-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 October 2001 in Journal of Biological Chemistry
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Journal Article
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AAAnna Y. Andreeva
Anna Y. Andreeva
EKEberhard Krause
Eberhard Krause
EMEva-Christina Müller
Eva-Christina Müller
IBIngolf E. Blasig
Ingolf E. Blasig
DUDarkhan I. Utepbergenov
Darkhan I. Utepbergenov
Occludin is an integral membrane phosphoprotein specifically associated with tight junctions, contributing to the structure and function of this intercellular seal. Occludin function is thought to be regulated by phosphorylation, but no information is available on the molecular pathways involved. In the present study, the involvement of the protein kinase C pathway in the regulation of the phosphorylation and cellular distribution of occludin has been investigated. Phorbol 12-myristate 13-acetate and 1,2-dioctanoylglycerol induced the rapid phosphorylation of occludin in Madin-Darby canine kidney cells cultured in low extracellular calcium medium with a concomitant translocation of occludin to the regions of cell-cell contact. The extent of occludin phosphorylation as well as its incorporation into tight junctions induced by protein kinase C activators or calcium switch were markedly decreased by the protein kinase C inhibitor GF-109203X. In addition, in vitroexperiments showed that the recombinant COOH-terminal domain of murine occludin could be phosphorylated by purified protein kinase C. Ser338 of occludin was identified as an in vitro protein kinase C phosphorylation site using peptide mass fingerprint analysis and electrospray ionization tandem mass spectroscopy. These findings indicate that protein kinase C is involved in the regulation of occludin function at tight junctions.

1 February 2005 in Journal of Biological Chemistry
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Journal Article
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SMSebastian L. Müller
Sebastian L. Müller
MPMichael Portwich
Michael Portwich
ASAnke Schmidt
Anke Schmidt
DUDarkhan I. Utepbergenov
Darkhan I. Utepbergenov
Otmar HuberOtmar Huber
Otmar Huber
GKGerd Krause
Gerd Krause
The exact sites, structures, and molecular mechanisms of interaction between junction organizing zona occludence protein 1 (ZO-1) and the tight junction protein occludin or the adherens junction protein α-catenin are unknown. Binding studies by surface plasmon resonance spectroscopy and peptide mapping combined with comparative modeling utilizing crystal structures led for the first time to a molecular model revealing the binding of both occludin and α-catenin to the same binding site in ZO-1. Our data support a concept that ZO-1 successively associates with α-catenin at the adherens junction and occludin at the tight junction. Strong spatial evidence indicates that the occludin C-terminal coiled-coil domain dimerizes and interacts finally as a four-helix bundle with the identified structural motifs in ZO-1. The helix bundle of occludin406–521 and α-catenin509–906 interacts with the hinge region (ZO-1591–632 and ZO-1591–622, respectively) and with (ZO-1726–754 and ZO-1756–781) in the GuK domain of ZO-1 containing coiled-coil and α-helical structures, respectively. The selectivity of both protein-protein interactions is defined by complementary shapes and charges between the participating epitopes. In conclusion, a common molecular mechanism of forming an intermolecular helical bundle between the hinge region/GuK domain of ZO-1 and α-catenin and occludin is identified as a general molecular principle organizing the association of ZO-1 at adherens and tight junctions.

1 March 2007 in Molecular Biology of the Cell
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Journal Article
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AFAlan S. Fanning
Alan S. Fanning
BLBrent P. Little
Brent P. Little
CRChristoph Rahner
Christoph Rahner
DUDarkhan Utepbergenov
Darkhan Utepbergenov
ZWZenta Walther
Zenta Walther
JAJames M. Anderson
James M. Anderson
The proper cellular location and sealing of tight junctions is assumed to depend on scaffolding properties of ZO-1, a member of the MAGUK protein family. ZO-1 contains a conserved SH3-GUK module that is separated by a variable region (unique-5), which in other MAGUKs has proven regulatory functions. To identify motifs in ZO-1 critical for its putative scaffolding functions, we focused on the SH3-GUK module including unique-5 (U5) and unique-6 (U6), a motif immediately C-terminal of the GUK domain. In vitro binding studies reveal U5 is sufficient for occludin binding; U6 reduces the affinity of this binding. In cultured cells, U5 is required for targeting ZO-1 to tight junctions and removal of U6 results in ectopically displaced junction strands containing the modified ZO-1, occludin, and claudin on the lateral cell membrane. These results provide evidence that ZO-1 can control the location of tight junction transmembrane proteins and reveals complex protein binding and targeting signals within its SH3-U5-GUK-U6 region. We review these findings in the context of regulated scaffolding functions of other MAGUK proteins.

1 August 2006 in Journal of Biological Chemistry
Verified
Journal Article
Open access
DUDarkhan I. Utepbergenov
Darkhan I. Utepbergenov
AFAlan S. Fanning
Alan S. Fanning
JAJames M. Anderson
James M. Anderson
The tight junction protein ZO-1 is known to link the transmembrane proteins occludin, claudins, and JAMs to many cytoplasmic proteins and the actin cytoskeleton. Although specific roles for ZO-1 at the tight junction are unknown, it is widely assumed that ZO-1, together with its homologs ZO-2 and ZO-3, serves as a platform to scaffold various transmembrane and cytoplasmic tight junction proteins. Thus the manner in which the zonula occludens (ZO) proteins multimerize has implications for the protein networks they can coordinate. The purpose of our study was to determine whether ZO-1 forms homodimers and to determine the protein interaction region. Using laser light scattering and analytical centrifugation, we show that protein sequences corresponding to the NH(2)-terminal half of ZO-1 form stable homodimers with a submicromolar equilibrium dissociation constant. Analysis of the molecular weight of different truncated forms of ZO-1 revealed that the second PDZ domain is both necessary and sufficient for dimerization. This interaction does not use the beta-finger motif described for other PDZ dimers. Furthermore, ZO-1 does not dimerize via an Src homology 3 to Guk domain interaction as was demonstrated previously for MAGUKs, like PSD-95. Results from immunoprecipitation experiments with polarized Madin-Darby canine kidney epithelial cells stably transfected with full-length GFP-ZO-1 indicate that a substantial portion of ZO-1 forms homodimers in vivo. As described previously, ZO-1 also forms heterodimers with ZO-2 and ZO-3. We conclude that the dimerization of ZO proteins is unlike that of other MAGUKs and that the previously unrecognized ZO-1 homodimers may allow formation of protein networks distinct from those of heterodimers with ZO-2 and ZO-3.

13 March 1998 in FEBS Letters
Verified
Journal Article
Closed access
DUDarkhan I Utepbergenov
Darkhan I Utepbergenov
KMKatharina Mertsch
Katharina Mertsch
ASAnje Sporbert
Anje Sporbert
KTKareen Tenz
Kareen Tenz
MPMartin Paul
Martin Paul
IBIngolf E Blasig
Ingolf E Blasig

14 October 2011 in Circulation Research
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Journal Article
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KMKo Momotani
Ko Momotani
MAMykhaylo V. Artamonov
Mykhaylo V. Artamonov
DUDarkhan Utepbergenov
Darkhan Utepbergenov
UDUrszula Derewenda
Urszula Derewenda
ZDZygmunt S. Derewenda
Zygmunt S. Derewenda
ASAvril V. Somlyo
Avril V. Somlyo
Rationale:: In normal and diseased vascular smooth muscle (SM), the RhoA pathway, which is activated by multiple agonists through G protein-coupled receptors (GPCRs), plays a central role in regulating basal tone and peripheral resistance. This occurs through inhibition of myosin light chain phosphatase, leading to increased phosphorylation of the myosin regulatory light chain. Although it is thought that specific agonists and GPCRs may couple to distinct RhoA guanine nucleotide exchange factors (GEFs), thus raising the possibility of selective targeting of specific GEFs for therapeutic use, this notion is largely unexplored for SM contraction.Objective:: We examine whether p63RhoGEF, known to couple specifically to Gαq/11in vitro, is functional in blood vessels as a mediator of RhoA activation and if it is selectively activated by Gαq/11coupled agonists.Methods and Results:: We find that p63RhoGEF is present across SM tissues and demonstrate that silencing of the endogenous p63RhoGEF in mouse portal vein inhibits contractile force induced by endothelin-1 to a greater extent than the predominantly Gα12/13-mediated thromboxane analog U46619. This is because endothelin-1 acts on Gαq/11as well as Gα12/13. Introduction of the exogenous isolated pleckstrin-homology (PH) domain of p63RhoGEF (residues 331–580) into permeabilized rabbit portal vein inhibited Ca2+sensitized force and activation of RhoA, when phenylephrine was used as an agonist. This reinforces the results based on endothelin-1, because phenylephrine is thought to act exclusively through Gαq/11.Conclusion:: We demonstrate that p63RhoGEF selectively couples Gαq/11but not Gα12/13, to RhoA activation in blood vessels and cultured cells and thus mediates the physiologically important Ca2+sensitization of force induced with Gαq/11-coupled agonists. Our results suggest that signaling through p63RhoGEF provides a novel mechanism for selective regulation of blood pressure.