We describe, explain, and "predict" dispersal and ecosystem impacts of six Ponto-Caspian endemic species that recently invaded the Great Lakes via ballast water. The zebra mussel, Dreissena polymorpha, and quagga mussel, Dreissena bugensis, continue to colonize hard and soft substrates of the Great Lakes and are changing ecosystem function through mechanisms of ecosystem engineering (increased water clarity and reef building), fouling native mussels, high particle filtration rate with selective rejection of colonial cyanobacteria in pseudofeces, alteration of nutrient ratios, and facilitation of the rapid spread of their Ponto-Caspian associates, the benthic amphipod Echinogammarus ischnus and the round goby, Neogobius melanostomus, which feeds on zebra mussels. The tubenose goby,Proterorhinus marmoratus, which does not feed on zebra mussels, has not spread rapidly. Impacts of these benthic invaders vary with site: in some shallow areas, habitat changes and the Dreissena [ ] round goby [ ] piscivore food chain have improved conditions for certain native game fishes and waterfowl; in offshore waters, Dreissena is competing for settling algae with the native amphipod Diporeia spp., which are disappearing to the detriment of the native deep-water fish community. The predatory cladoceran Cercopagis pengoi may compete with small fishes for zooplankton and increase food-chain length.

Herein, we document changes in the Lake Michigan food web between 1970 and 2000 and identify the factors responsible for these changes. Control of sea lamprey (Petromyzon marinus) and alewife (Alosa pseudoharengus) populations in Lake Michigan, beginning in the 1950s and 1960s, had profound effects on the food web. Recoveries of lake whitefish (Coregonus clupeaformis) and burbot (Lota lota) populations, as well as the buildup of salmonine populations, were attributable, at least in part, to sea lamprey control. Based on our analyses, predation by salmonines was primarily responsible for the reduction in alewife abundance during the 1970s and early 1980s. In turn, the decrease in alewife abundance likely contributed to recoveries of deepwater sculpin (Myoxocephalus thompsoni), yellow perch (Perca flavescens), and burbot populations during the 1970s and 1980s. Decrease in the abundance of all three dominant benthic macroinvertebrate groups, including Diporeia, oligochaetes, and sphaeriids, during the 1980s in nearshore waters ([ ]50 m deep) of Lake Michigan, was attributable to a decrease in primary production linked to a decline in phosphorus loadings. Continued decrease in Diporeia abundance during the 1990s was associated with the zebra mussel (Dreissena polymorpha) invasion, but specific mechanisms for zebra mussels affecting Diporeia abundance remain unidentified.