Andrea Zen

Andrea Zen

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Andrea Zen

Department of Earth Sciences, University College London , London WC1E 6BT, and , Monte S. Angelo, I-80126 Napoli

Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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26 May 2016 in Chemical Reviews
Verified
Journal Article
Open access
GSGabriele C. Sosso
Gabriele C. Sosso
JCJi Chen
Ji Chen
SCStephen J. Cox
Stephen J. Cox
MFMartin Fitzner
Martin Fitzner
PPPhilipp Pedevilla
Philipp Pedevilla
AMAngelos Michaelides
Angelos Michaelides
The nucleation of crystals in liquids is one of nature’s most ubiquitous phenomena, playing an important role in areas such as climate change and the production of drugs. As the early stages of nucleation involve exceedingly small time and length scales, atomistic computer simulations can provide unique insights into the microscopic aspects of crystallization. In this review, we take stock of the numerous molecular dynamics simulations that, in the past few decades, have unraveled crucial aspects of crystal nucleation in liquids. We put into context the theoretical framework of classical nucleation theory and the state-of-the-art computational methods by reviewing simulations of such processes as ice nucleation and the crystallization of molecules in solutions. We shall see that molecular dynamics simulations have provided key insights into diverse nucleation scenarios, ranging from colloidal particles to natural gas hydrates, and that, as a result, the general applicability of classical nucleation theory has been repeatedly called into question. We have attempted to identify the most pressing open questions in the field. We believe that, by improving (i) existing interatomic potentials and (ii) currently available enhanced sampling methods, the community can move toward accurate investigations of realistic systems of practical interest, thus bringing simulations a step closer to experiments.

14 September 2022 in Nature
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Journal Article
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VKVenkat Kapil
Venkat Kapil
CSChristoph Schran
Christoph Schran
AZAndrea Zen
Andrea Zen
JCJi Chen
Ji Chen
CPChris J. Pickard
Chris J. Pickard
AMAngelos Michaelides
Angelos Michaelides

24 June 2021 in Nature Communications
Verified
Journal Article
Open access
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YAYasmine S. Al-Hamdani
Yasmine S. Al-Hamdani
PNPéter R. Nagy
Péter R. Nagy
AZAndrea Zen
Andrea Zen
DBDennis Barton
Dennis Barton
MKMihály Kállay
Mihály Kállay
ATAlexandre Tkatchenko
Alexandre Tkatchenko
Quantum-mechanical methods are used for understanding molecular interactions throughout the natural sciences. Quantum diffusion Monte Carlo (DMC) and coupled cluster with single, double, and perturbative triple excitations [CCSD(T)] are state-of-the-art trusted wavefunction methods that have been shown to yield accurate interaction energies for small organic molecules. These methods provide valuable reference information for widely-used semi-empirical and machine learning potentials, especially where experimental information is scarce. However, agreement for systems beyond small molecules is a crucial remaining milestone for cementing the benchmark accuracy of these methods. We show that CCSD(T) and DMC interaction energies are not consistent for a set of polarizable supramolecules. Whilst there is agreement for some of the complexes, in a few key systems disagreements of up to 8 kcal mol−1 remain. These findings thus indicate that more caution is required when aiming at reproducible non-covalent interactions between extended molecules.

7 January 2019 in The Journal of Physical Chemistry Letters
Verified
Journal Article
Closed access
JBJan Gerit Brandenburg
Jan Gerit Brandenburg
AZAndrea Zen
Andrea Zen
MFMartin Fitzner
Martin Fitzner
BRBenjamin Ramberger
Benjamin Ramberger
GKGeorg Kresse
Georg Kresse
DADario Alfè
Dario Alfè

5 February 2018 in Proceedings of the National Academy of Sciences
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Journal Article
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AZAndrea Zen
Andrea Zen
JBJan Gerit Brandenburg
Jan Gerit Brandenburg
JKJiří Klimeš
Jiří Klimeš
ATAlexandre Tkatchenko
Alexandre Tkatchenko
DADario Alfè
Dario Alfè
AMAngelos Michaelides
Angelos Michaelides
Significance: Computational approaches based on the fundamental laws of quantum mechanics are now integral to almost all materials design initiatives in academia and industry. If computational materials science is genuinely going to deliver on its promises, then an electronic structure method with consistently high accuracy is urgently needed. We show that, thanks to recent algorithmic advances and the strategy developed in our manuscript, quantum Monte Carlo yields extremely accurate predictions for the lattice energies of materials at a surprisingly modest computational cost. It is thus no longer a technique that requires a world-leading computational facility to obtain meaningful results. While we focus on molecular crystals, the significance of our findings extends to all classes of materials.

2 December 2016 in The Journal of Chemical Physics
Verified
Journal Article
Closed access
PDF file
GSGabriele C. Sosso
Gabriele C. Sosso
GTGareth A. Tribello
Gareth A. Tribello
AZAndrea Zen
Andrea Zen
PPPhilipp Pedevilla
Philipp Pedevilla
AMAngelos Michaelides
Angelos Michaelides
The formation of ice affects many aspects of our everyday life as well as important technologies such as cryotherapy and cryopreservation. Foreign substances almost always aid water freezing through heterogeneous ice nucleation, but the molecular details of this process remain largely unknown. In fact, insight into the microscopic mechanism of ice formation on different substrates is difficult to obtain even if state-of-the-art experimental techniques are used. At the same time, atomistic simulations of heterogeneous ice nucleation frequently face extraordinary challenges due to the complexity of the water-substrate interaction and the long time scales that characterize nucleation events. Here, we have investigated several aspects of molecular dynamics simulations of heterogeneous ice nucleation considering as a prototypical ice nucleating material the clay mineral kaolinite, which is of relevance in atmospheric science. We show via seeded molecular dynamics simulations that ice nucleation on the hydroxylated (001) face of kaolinite proceeds exclusively via the formation of the hexagonal ice polytype. The critical nucleus size is two times smaller than that obtained for homogeneous nucleation at the same supercooling. Previous findings suggested that the flexibility of the kaolinite surface can alter the time scale for ice nucleation within molecular dynamics simulations. However, we here demonstrate that equally flexible (or non flexible) kaolinite surfaces can lead to very different outcomes in terms of ice formation, according to whether or not the surface relaxation of the clay is taken into account. We show that very small structural changes upon relaxation dramatically alter the ability of kaolinite to provide a template for the formation of a hexagonal overlayer of water molecules at the water-kaolinite interface, and that this relaxation therefore determines the nucleation ability of this mineral.