Benoît Manuel carreres

Dr. Benoît Manuel carreres

Nestlé (Switzerland), Vevey, Vaud, Switzerland
orcid

Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 December 2021 in Scientific Reports
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Journal Article
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PFPaulo A. Da Costa Filho
Paulo A. Da Costa Filho
DADaniel Andrey
Daniel Andrey
BEBjorn Eriksen
Bjorn Eriksen
RPRafael P. Peixoto
Rafael P. Peixoto
Benoît Manuel carreresBenoît Manuel carreres
Benoît Manuel carreres
EPEric Poitevin
Eric Poitevin
Microplastics (MPs) have gained a high degree of public interest since they are associated with the global release of plastics into the environment. Various studies have confirmed the presence of MPs throughout the food chain. However, information on the ingestion of MPs via the consumption of many commonly consumed foods like dairy products are scarce due to the lack of studies investigating the “contamination” of this food group by MPs. This lack of occurrence data is mainly due to the absence of robust analytical methods capable of reliably quantifying MPs with size < 20 µm in foods. In this work, a new methodology was developed to accurately determine and characterize MPs in milk-based products using micro-Raman (μRaman) technology, entailing combined enzymatic and chemical digestion steps. This is the first time that the presence of relatively low amounts of small-sized MP (≥ 5 µm) have been reported in raw milk collected at farm just after the milking machine and in some processed commercial liquid and powdered cow’s milk products.

13 April 2018 in PLOS ONE
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Journal Article
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LJLenny De Jaeger
Lenny De Jaeger
Benoît Manuel carreresBenoît Manuel carreres
Benoît Manuel carreres
JSJan Springer
Jan Springer
PSPeter J. Schaap
Peter J. Schaap
GEGerrit Eggink
Gerrit Eggink
Dirk MartensDirk Martens
Dirk Martens
Neochloris oleoabundans is an oleaginous microalgal species that can be cultivated in fresh water as well as salt water. Using salt water gives the opportunity to reduce production costs and the fresh water footprint for large scale cultivation. Production of triacylglycerols (TAG) usually includes a biomass growth phase in nitrogen-replete conditions followed by a TAG accumulation phase under nitrogen-deplete conditions. This is the first report that provides insight in the saline resistance mechanism of a fresh water oleaginous microalgae. To better understand the osmoregulatory mechanism of N. oleoabundans during growth and TAG accumulating conditions, the transcriptome was sequenced under four different conditions: fresh water nitrogen-replete and -deplete conditions, and salt water (525 mM dissolved salts, 448mM extra NaCl) nitrogen-replete and -deplete conditions. In this study, several pathways are identified to be responsible for salt water adaptation of N. oleoabundans under both nitrogen-replete and -deplete conditions. Proline and the ascorbate-glutathione cycle seem to be of importance for successful osmoregulation in N. oleoabundans. Genes involved in Proline biosynthesis were found to be upregulated in salt water. This was supported by Nuclear magnetic resonance (NMR) spectroscopy, which indicated an increase in proline content in the salt water nitrogen-replete condition. Additionally, the lipid accumulation pathway was studied to gain insight in the gene regulation in the first 24 hours after nitrogen was depleted. Oil accumulation is increased under nitrogen-deplete conditions in a comparable way in both fresh and salt water. The mechanism behind the biosynthesis of compatible osmolytes can be used to improve N. oleoabundans and other industrially relevant microalgal strains to create a more robust and sustainable production platform for microalgae derived products in the future.

19 January 2017 in Microbiology Resource Announcements
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Journal Article
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Benoît Manuel carreresBenoît Manuel carreres
Benoît Manuel carreres
LJL. de Jaeger
L. de Jaeger
JSJ. Springer
J. Springer
MBM. J. Barbosa
M. J. Barbosa
GBG. Breuer
G. Breuer
Dirk MartensDirk Martens
Dirk Martens
The microalgae Tetradesmus obliquus is able to maintain a high photosynthetic efficiency under nitrogen limitation and is considered a promising green microalgae for sustainable production of diverse compounds, including biofuels. Here, we report the first draft whole-genome shotgun sequencing of T. obliquus . The final assembly comprises 108,715,903 bp with over 1,368 scaffolds.

16 April 2021 in Food Additives & Contaminants: Part A
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Journal Article
Closed access
TBThomas Bessaire
Thomas Bessaire
MEMarion Ernest
Marion Ernest
NCNicolas Christinat
Nicolas Christinat
Benoît Manuel carreresBenoît Manuel carreres
Benoît Manuel carreres
APAlexandre Panchaud
Alexandre Panchaud
FNFlavia Nagy
Flavia Nagy
An analytical workflow including mass spectral library, generic sample preparation, chromatographic separation, and analysis by high-resolution mass spectrometry (HRMS) was developed to gain insight into the occurrence of plant toxins, mycotoxins and phytoestrogens in plant-based food. This workflow was applied to 156 compounds including 90 plant toxins (pyrrolizidine alkaloids, tropane alkaloids, glycoalkaloids, isoquinoline alkaloids and aristolochic acids), 54 mycotoxins (including ergot alkaloids and Alternaria toxins) and 12 phytoestrogens (including isoflavones, lignans and coumestan) in plant-based protein ingredients, cereal and pseudo-cereal products. A mass spectral library was built based on fragmentation spectra collected at 10 different collision energies in both positive and negative ionisation modes for each toxin. Emphasis was put on a generic QuEChERS-like sample preparation followed by ultra-high-pressure liquid chromatography using alkaline mobile phase allowing the separation of more than 50 toxic pyrrolizidine alkaloids. HRMS acquisition comprised a full-scan event for toxins detection followed by data-dependent MS2 for toxin identification against mass spectrum. Method performance was evaluated using fortified samples in terms of sensitivity, repeatability, reproducibility and recovery. All toxins were positively identified at levels ranging from 1 µg kg−1 to 100 µg kg−1. Quantitative results obtained by a standard addition approach met SANTE/12682/2019 criteria for 132 out of 156 toxins. Such a workflow using generic, sensitive and selective multi-residue method allows a better insight into the occurrence of regulated and non-regulated toxins in plant-based foods and to conduct safety evaluation and risk assessments when needed. Graphical Abstract

3 July 2020 in Science Advances
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JRJan Akara Rath
Jan Akara Rath
GBGagan Bajwa
Gagan Bajwa
Benoît Manuel carreresBenoît Manuel carreres
Benoît Manuel carreres
EHElisabeth Hoyer
Elisabeth Hoyer
IGIsabelle Gruber
Isabelle Gruber
CACaroline Arber
Caroline Arber
TCR-CD8–engineered CD4 + T cells have potent antitumor activity with sustained expression of diverse transcriptional programs.

25 September 2024 in Foods
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Journal Article
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TBThomas Bessaire
Thomas Bessaire
MSMarie-Claude Savoy
Marie-Claude Savoy
MEMarion Ernest
Marion Ernest
NCNicolas Christinat
Nicolas Christinat
FNFlavia Nagy
Flavia Nagy
TDThierry Delatour
Thierry Delatour
The consequences of climate change along with diverse food regulations and agricultural practices worldwide are complexifying the occurrence and management of chemical contaminants in food. In this context, we present an ultra-high-performance liquid chromatography high-resolution mass spectrometry (LC-HRMS) approach for the simultaneous identification and quantitation of over 1100 pesticide residues, mycotoxins, and plant toxins in cereals and fruits and vegetables. Analytical conditions were optimized to maximize the scope of the targeted molecules, the reliability of compound identification, and quantification performance within a single method. The method was further transferred and validated in another laboratory to assess its ruggedness. Validation according to the SANTE 11312/2021v2 guidelines showed that 92% and 98% of the molecules fulfill the quantification criteria at the lowest validated level in the cereals and fruits and vegetables groups, respectively. Analysis of fifteen certified reference materials led to a 96% satisfactory rate of z-scores confirming method’s competitiveness. Furthermore, the occurrence of these contaminants was studied in 205 cereals and grains samples collected worldwide. The low µg/kg quantification limits make this LC-HRMS method a valuable tool to ensure compliance toward regulations and to screen for non-regulated substances for which occurrence data are crucial for an appropriate risk evaluation.