Dmitry Karabanov

Dr. Dmitry Karabanov

Fish ecology, Papanin Institute for Biology of Inland Waters Russian Academy of Sciences, Borok, Russia
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Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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24 August 2016 in PLOS ONE
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Journal Article
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EBEugeniya I. Bekker
Eugeniya I. Bekker
Dmitry KarabanovDmitry Karabanov
Dmitry Karabanov
YGYan R. Galimov
Yan R. Galimov
Alexey KotovAlexey Kotov
Alexey Kotov
Species of the genus Moina Baird (Cladocera: Moinidae) often dominate freshwater crustacean communities in temporary water bodies. Several species of Moina are used as food for fish larvae in aquaculture, as bioindicators in toxicological studies, and as common subjects for physiological studies. The aim of this paper is to estimate biodiversity of Moina in northern Eurasia using the standard DNA barcoding approach based on the cytochrome c oxidase subunit I (COI) gene. We analysed 160 newly obtained and 157 existing COI sequences, and found evidence for 21 phylogroups of Moina, some of which were detected here for the first time. Our study confirmed the opinion that the actual species diversity of cladocerans is several times higher than is presently accepted. Our results also indicated that Moina has the second richest species diversity among the cladoceran genera (with only Daphnia O. F. Mueller having a greater diversity of species). Our study strongly supports division of Moina into two faunistic groups: European-Western Siberian and Eastern Siberian-Far Eastern, with a transitional zone at the Yenisey River basin (Eastern Siberia). Here, we refrain from taxonomic descriptions of new species, as this requires a thorough morphological and taxonomic study for each putative taxon.

15 March 2018 in PLOS ONE
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EBEugeniya I Bekker
Eugeniya I Bekker
Dmitry KarabanovDmitry Karabanov
Dmitry Karabanov
YGYan R Galimov
Yan R Galimov
CHChristoph R Haag
Christoph R Haag
TNTatiana V Neretina
Tatiana V Neretina
Alexey KotovAlexey Kotov
Alexey Kotov
Species with a large geographic distributions present a challenge for phylogeographic studies due to logistic difficulties of obtaining adequate sampling. For instance, in most species with a Holarctic distribution, the majority of studies has concentrated on the European or North American part of the distribution, with the Eastern Palearctic region being notably understudied. Here, we study the phylogeography of the freshwater cladoceran Daphnia magna Straus, 1820 (Crustacea: Cladocera), based on partial mitochondrial COI sequences and using specimens from populations spread longitudinally from westernmost Europe to easternmost Asia, with many samples from previously strongly understudied regions in Siberia and Eastern Asia. The results confirm the previously suspected deep split between Eastern and Western mitochondrial haplotype super-clades. We find a narrow contact zone between these two super-clades in the eastern part of Western Siberia, with proven co-occurrence in a single lake in the Novosibirsk region. However, at present there is no evidence suggesting that the two mitochondrial super-clades represent cryptic species. Rather, they may be explained by secondary contact after expansion from different refugia. Interestingly, Central Siberia has previously been found to be an important contact zone also in other cladoceran species, and may thus be a crucial area for understanding the Eurasian phylogeography of freshwater invertebrates. Together, our study provides an unprecedented complete, while still not global, picture of the phylogeography of this important model species.

19 December 2016 in PLOS ONE
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Alexey KotovAlexey Kotov
Alexey Kotov
Dmitry KarabanovDmitry Karabanov
Dmitry Karabanov
EBEugeniya I Bekker
Eugeniya I Bekker
TNTatiana V Neretina
Tatiana V Neretina
DTDerek J Taylor
Derek J Taylor
The biodiversity and the biogeography are still poorly understood for freshwater invertebrates. The crustacean Chydorus sphaericus-brevilabris complex (Cladocera: Chydoridae) is composed of species that are important components of Holarctic freshwater food webs. Recent morphological and genetic study of the complex has indicated a substantial species diversity in the northern hemisphere. However, we know little of the geographic boundaries of these novel lineages. Moreover, a large section of the Palearctic remains unexamined at the genetic level. Here we attempt to address the biodiversity knowledge gap for the Chydorus sphaericus group in the central Palearctic and assess its diversity and biogeographic boundaries. We sequenced nuclear (ITS-2) and mitochondrial (COI) gene regions of Chydorus specimens across the Palearctic and compared them with already available Holarctic sequences. We detected six main clades in the C. sphaericus group in the Palearctic, of which two of the groups are novel. Three of the more divergent clades are geographically widespread. The central portion of Eurasia (the Yenisey River basin) appears to be a narrow zone of secondary contact for phylogroups that expanded from European and Beringian refugia. As such, the previously unsampled central Palearctic represents an important region for understanding the evolutionary consequences of Pleistocene climatic oscillations on the Chydorus sphaericus group.

17 June 2020 in Zoological Journal of the Linnean Society
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Alexey KotovAlexey Kotov
Alexey Kotov
PGPetr G Garibian
Petr G Garibian
EBEugeniya I Bekker
Eugeniya I Bekker
DTDerek J Taylor
Derek J Taylor
Dmitry KarabanovDmitry Karabanov
Dmitry Karabanov
The eastern Palaearctic is a centre of diversity for freshwater cladocerans (Crustacea), but little is known about the evolution and taxonomy of this diversity. Daphnia curvirostris is a Holarctic species complex that has most of its diversity in the eastern Palaearctic. We examined the phylogeography, rates of evolution and taxonomic status for each clade of the D. curvirostris complex using morphological and genetic evidence from four genes. The cybertaxonomical and morphological evidence supported an eastern Palaearctic clade, with at least four species (described here as the Daphnia korovchinskyi sp. nov. group) having diagnostic morphological characters. We also detected convergent morphological characters in the D. curvirostris complex that provided information about species boundaries. Two of the new species (Daphnia koreana sp. nov. and Daphnia ishidai sp. nov.) are known from single ponds and are threatened by human activity. Divergence time estimates suggested an ancient origin (12–28 Mya) for the D. korovchinskyi group, but these estimates are complicated by the small number of calibration points.

9 September 2022 in Water
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Alexey KotovAlexey Kotov
Alexey Kotov
Dmitry KarabanovDmitry Karabanov
Dmitry Karabanov
Kay Van DammeKay Van Damme
Kay Van Damme
Non-indigenous species may pose a threat to native ecosystems worldwide. In aquatic environments, invasives may have a negative impact on human food security and livelihoods. Several water fleas (Crustacea: Branchiopoda: Cladocera) are notorious invasive alien species influencing large freshwater lake systems and even inland seas. In the current review, we discuss the state of knowledge regarding non-indigenous species in the Cladocera and their invasiveness potential in different continents. We argue that the potential impacts and occurrence of cladoceran exotics may be higher than generally assumed. We critically review 79 cases from literature sources, involving 61 cladoceran taxa where records outside of their natural distribution ranges were previously interpreted as invasions. We assessed the probability of natural range expansions versus human-mediated introductions and we discuss several major corridors of invasion. We estimate human-mediated transportations for at least 43 taxa (out of 61; ca 70%), while other cases can be seen as natural expansions of their distribution ranges (not necessarily/not likely human-mediated) and/or taxonomical confusion. We confirm non-indigenous presence in recipient regions for at least 41 cladoceran taxa, of which several are true invasives (i.e., with negative impacts on native ecosystems). The majority are zooplankters with effects on pelagic freshwater ecosystems, yet we also report on introductions by littoral taxa. We argue that cryptic introductions of cladocerans are taking place on a global scale, yet they remain under the radar. We highlight several striking case studies, such as the Ponto–Caspian onychopods that have invaded the Baltic Sea and the Laurentian Great Lakes, and several clones of the anomopod genera Daphnia and Bosmina that have successfully colonised new environments, causing equilibria shifts in native aquatic worlds. At the same time, we dispel some myths about taxa that were misconstrued as invasive in certain localities. Based on our review, the first of its kind for freshwater zooplankton, future environmental monitoring tools including molecular techniques and detailed surveys with rigorous and critical taxonomical assessments may help to provide a clearer picture on the extent of invasiveness of cladocerans.

2 September 2016 in Zootaxa
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EPEkaterina V. Popova
Ekaterina V. Popova
Adam PetrusekAdam Petrusek
Adam Petrusek
VKVladimír Kořínek
Vladimír Kořínek
JMJoachim Mergeay
Joachim Mergeay
EBEugeniya I. Bekker
Eugeniya I. Bekker
Alexey KotovAlexey Kotov
Alexey Kotov
Species of the genus Daphnia O.F. Müller, 1785 (Cladocera: Daphniidae) have become very important models in evolutionary biology research. Previous morphological and genetic evidence suggests that numerous closely related “species groups” exist within the subgenus Daphnia (Ctenodaphnia) Dybowski & Grochowski, 1895, containing both described and undescribed species. The Daphnia similis group is among these species groups. The aim of the present paper is to revise the taxonomy of the Daphnia (Ctenodaphnia) similis group in the Old World with both morphological and genetic evidence (based on mitochondrial COI and 12S rRNA genes). We found that there are at least four species in the Old World D. similis species group: D. similis Claus, 1876; D. sinensis Gu, Xu, Li, Dumont et Han, 2013; D. similoides Hudec, 1991 and D. inopinata sp. nov. These four taxa of the similis-group, confused previously with D. similis, have different distributional ranges in the Old World, from extremely wide, spanning several biogegraphic regions (as D. sinensis), to regional endemics (D. similoides) and even species known so far from a single locality (D. inopinata sp. nov.). The Daphnia similis group provides another example in the cladocerans whereby the study of males yields more valuable characters for taxonomy than the study of parthenogenetic females.