Davide Spinello

Dr. Davide Spinello

University of Ottawa
orcid

Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
8 October 2007 in Smart Materials and Structures
Verified
Journal Article
Closed access
RBR C Batra
R C Batra
MPMaurizio Porfiri
Maurizio Porfiri
Davide SpinelloDavide Spinello
Davide Spinello
A wide range of microelectromechanical systems (MEMSs) and devices are actuated using electrostatic forces. Multiphysics modeling is required, since coupling among different fields such as solid and fluid mechanics, thermomechanics and electromagnetism is involved. This work presents an overview of models for electrostatically actuated MEMSs. Three-dimensional nonlinear formulations for the coupled electromechanical fluid-structure interaction problem are outlined. Simplified reduced-order models are illustrated along with assumptions that define their range of applicability. Theoretical, numerical and experimental works are classified according to the mechanical model used in the analysis.

19 September 2022 in Computational and Structural Biotechnology Journal
Verified
Journal Article
Open access
FSFarzan Soleymani
Farzan Soleymani
EPEric Paquet
Eric Paquet
HVHerna Viktor
Herna Viktor
WMWojtek Michalowski
Wojtek Michalowski
Davide SpinelloDavide Spinello
Davide Spinello
Most proteins perform their biological function by interacting with themselves or other molecules. Thus, one may obtain biological insights into protein functions, disease prevalence, and therapy development by identifying protein–protein interactions (PPI). However, finding the interacting and non-interacting protein pairs through experimental approaches is labour-intensive and time-consuming, owing to the variety of proteins. Hence, protein–protein interaction and protein–ligand binding problems have drawn attention in the fields of bioinformatics and computer-aided drug discovery. Deep learning methods paved the way for scientists to predict the 3-D structure of proteins from genomes, predict the functions and attributes of a protein, and modify and design new proteins to provide desired functions. This review focuses on recent deep learning methods applied to problems including predicting protein functions, protein–protein interaction and their sites, protein–ligand binding, and protein design.

1 January 2008 in Journal of Sound and Vibration
Verified
Journal Article
Closed access
RBR.C. Batra
R.C. Batra
MPMaurizio Porfiri
Maurizio Porfiri
Davide SpinelloDavide Spinello
Davide Spinello

30 October 2006 in Journal of Microelectromechanical Systems
Verified
Journal Article
Closed access
RBR.C. Batra
R.C. Batra
MPMaurizio Porfiri
Maurizio Porfiri
Davide SpinelloDavide Spinello
Davide Spinello
A consistent one-dimensional distributed electromechanical model of an electrically actuated narrow microbeam with width/height between 0.5–2.0 is derived, and the needed pull-in parameters are extracted with different methods. The model accounts for the position-dependent electrostatic loading, the fringing field effects due to both the finite width and the finite thickness of a microbeam, the mid-plane stretching, the mechanical distributed stiffness, and the residual axial load. Both clamped–clamped and clamped-free (cantilever) microbeams are considered. The method of moments is used to estimate the electrostatic load. The resulting nonlinear fourth-order differential equation under appropriate boundary conditions is solved by two methods. Initially, a one-degree-of-freedom model is proposed to find an approximate solution of the problem. Subsequently, the meshless local Petrov–Galerkin (MLPG) and the finite-element (FE) methods are used, and results from the three methods are compared. For the MLPG method, the kinematic boundary conditions are enforced by introducing a set of Lagrange multipliers, and the trial and the test functions are constructed using the generalized moving least-squares approximation. The nonlinear system of algebraic equations arising from the MLPG and the FE methods are solved by using the displacement iteration pull-in extraction (DIPIE) algorithm. Three-dimensional FE simulations of narrow cantilever and clamped–clamped microbeams are also performed with the commercial code ANSYS. Furthermore, computed results are compared with those arising from other distributed models available in the literature, and it is shown that improper fringing fields give inaccurate estimations of the pull-in voltages and of the pull-in deflections. 1641

1 June 2008 in International Journal of Solids and Structures
Verified
Journal Article
Closed access
RBR.C. Batra
R.C. Batra
MPMaurizio Porfiri
Maurizio Porfiri
Davide SpinelloDavide Spinello
Davide Spinello

15 January 2007 in Europhysics Letters
Verified
Journal Article
Closed access
RBR. C Batra
R. C Batra
MPMaurizio Porfiri
Maurizio Porfiri
Davide SpinelloDavide Spinello
Davide Spinello