Abinet Legesse

Mr. Abinet Legesse

orcid
Senior researcher, NVI, Ethiopia

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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10 August 2023 in BMC Microbiology
Verified
Journal Article
Open access
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Abinet LegesseAbinet Legesse
Abinet Legesse
AMAregitu Mekuriaw
Aregitu Mekuriaw
EGEsayas Gelaye
Esayas Gelaye
TATakele Abayneh
Takele Abayneh
Belayneh Getachew AyalewBelayneh Getachew Ayalew
Belayneh Getachew Ayalew
KBKenaw Birhanu
Kenaw Birhanu
Background: Brucellosis is an economically devastating animal disease and has public health concern. Serological methods such as Rose Bengal Plate Test (RBPT), Complement Fixation Test (CFT), and Indirect-Enzyme-Linked Immunosorbent Assay (I-ELISA) have been used to detect brucellosis. However, there is limited comparative evaluation studies and lack of molecular confirmation of the causative agents in the study areas. The study was aimed to compare RBPT, I-ELISA, CFT, and confirmation using Polymerase Chain Reaction (PCR). A total of 2317 sera samples were collected from brucellosis-affected areas of Ethiopia with no vaccination history. All sera were subjected to comparative serological assays. Post-cross tabulation, sensitivity, and specificity were determined using Receiver Operating Characteristics (ROC) curve analysis software. PCR was performed on 54 seropositive samples using genus- and species-specific primers. Results: Among the 2317 sera tested for comparative serological assays, 189 (8.16%) were positive for RBPT, 191 (8.24%) for I-ELISA, and 48 (2.07%) for CFT. Sensitivity to RBPT was 100% (95%) in shoats and 74% (95%) in cattle. Specificity on RBPT was 98.69% (95%), 99.28% (95%), 100% (95%) in sheep, goats, and cattle, respectively. CFT sensitivity was 4 (95%) in sheep, 9.65 (95%) goats, and 72 (95%) cattle. Specificity on CFT was 100% (95%) for sheep, goats, and cattle. A 223bp Brucella genus-specific and 156bp B. abortus species-specific detected. However, B. melitensis not detected. Conclusion: In this study, I-ELISA was the most sensitive and specific test. RBPT detected all Brucellosis-infected sheep and goats; nevertheless, it showed false positive in sheep and goats and false negative in cattle. The presence of B. abortus in small and large ruminants was confirmed by PCR. This is the first report of B. abortus detection in small ruminant in Ethiopia. B.abortus detected in non-preferred hosts. The findings suggest further study on molecular epidemiology of Brucella species.

5 December 2018 in BMC Microbiology
Verified
Journal Article
Open access
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Abinet LegesseAbinet Legesse
Abinet Legesse
TATakele Abayneh
Takele Abayneh
GKGezahegne Mamo Kassa
Gezahegne Mamo Kassa
Esayas GELAYE GELAYEEsayas GELAYE GELAYE
Esayas GELAYE GELAYE
LTLiyuwork Tesfaw
Liyuwork Tesfaw
ABAlebachew Belay
Alebachew Belay
Mannheimia haemolytica has been recognized as the principal cause of pneumonic pasteurellosis in sheep and goats. It is one of the important diseases of small ruminants in Ethiopia. While annual vaccination using a monovalent vaccine (inactivated Pasteurella multocida biotype A) is common, respiratory diseases are still reported in various parts of Ethiopia. This suggests the need for further investigation into the species and strains responsible for the disease, which is vital information for development of a multivalent vaccine. The objective of the current study was to isolate M. heamolytica associated with pneumonic cases of sheep in selected areas of Central Ethiopia, determine its role and the strains/genotypes of the bacterium circulating in the study area. Bacteriological analysis of nasal swab samples collected from a total of 76 pneumonic cases of sheep showed that M. haemolytica was isolated from 26 of them while B.trehalosi from two cases. Further molecular analyses of the isolates using M. haemolytica species-specific and M.haemolytica serotype-1 antigen specific PCR assays revealed, 26 of the isolates were identified as M. haemolytica of which 21 of them were M. haemolytica serotype-1. Both M. haemolytica and B.trehalosi isolates were not detected in a PCR assay targeting capsular biosynthesis gene (capA) of P.multocida despite the non-specific products observed in M. haemolytica isolates. Phylogenetic analysis of M. haemolytica isolates included in this study in comparison with the reference strains with respect to PHSSA and Rpt2 genes revealed that the Ethiopian M. haemolytica isolates constituted three distinct genotypes consistent with site of origin. The study indicated that M.haemolytica is commonly associated with cases of pneumonia in sheep in the study areas of central Ethiopia although the remaining other pathogens responsible for majority of the cases are yet to be determined. Molecular characterization revealed the existence of three genotypes of M. haemolytica circulating in the study areas consistent to the site of isolation. The findings suggest further extensive work to determine all pathogens associated with sheep pneumonia and the strain distribution of M. heamolytica to understand its molecular epidemiology at national level and design cost effective prevention and control methods.

24 March 2023 in PLOS Pathogens
Verified
Journal Article
Open access
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EIEpshita A. Islam
Epshita A. Islam
JFJamie E. Fegan
Jamie E. Fegan
TTTakele A. Tefera
Takele A. Tefera
DCDavid M. Curran
David M. Curran
RWRegula C. Waeckerlin
Regula C. Waeckerlin
TMTrevor F. Moraes
Trevor F. Moraes
Pasteurella multocida can infect a multitude of wild and domesticated animals, with infections in cattle resulting in hemorrhagic septicemia (HS) or contributing to bovine respiratory disease (BRD) complex. Current cattle vaccines against P. multocida consist of inactivated bacteria, which only offer limited and serogroup specific protection. Here, we describe a newly identified surface lipoprotein, PmSLP, that is present in nearly all annotated P. multocida strains isolated from cattle. Bovine associated variants span three of the four identified phylogenetic clusters, with PmSLP-1 and PmSLP-2 being restricted to BRD associated isolates and PmSLP-3 being restricted to isolates associated with HS. Recombinantly expressed, soluble PmSLP-1 (BRD-PmSLP) and PmSLP-3 (HS-PmSLP) vaccines were both able to provide full protection in a mouse sepsis model against the matched P. multocida strain, however no cross-protection and minimal serum IgG cross-reactivity was identified. Full protection against both challenge strains was achieved with a bivalent vaccine containing both BRD-PmSLP and HS-PmSLP, with serum IgG from immunized mice being highly reactive to both variants. Year-long stability studies with lyophilized antigen stored under various temperatures show no appreciable difference in biophysical properties or loss of efficacy in the mouse challenge model. PmSLP-1 and PmSLP-3 vaccines were each evaluated for immunogenicity in two independent cattle trials involving animals of different age ranges and breeds. In all four trials, vaccination with PmSLP resulted in an increase in antigen specific serum IgG over baseline. In a blinded cattle challenge study with a recently isolated HS strain, the matched HS-PmSLP vaccine showed strong efficacy (75–87.5% survival compared to 0% in the control group). Together, these data suggest that cattle vaccines composed of PmSLP antigens can be a practical and effective solution for preventing HS and BRD related P. multocida infections.

21 May 2024 in Frontiers in Immunology
Verified
Journal Article
Open access
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JFJamie E. Fegan
Jamie E. Fegan
RWRegula C. Waeckerlin
Regula C. Waeckerlin
LTLiyuwork Tesfaw
Liyuwork Tesfaw
EIEpshita A. Islam
Epshita A. Islam
GDGetaw Deresse
Getaw Deresse
SGScott Gray-Owen
Scott Gray-Owen
Background: Pasteurella multocida is a bacterial pathogen that causes a variety of infections across diverse animal species, with one of the most devastating associated diseases being hemorrhagic septicemia. Outbreaks of hemorrhagic septicemia in cattle and buffaloes are marked by rapid progression and high mortality. These infections have particularly harmful socio-economic impacts on small holder farmers in Africa and Asia who are heavily reliant on a small number of animals kept as a means of subsistence for milk and draft power purposes. A novel vaccine target, PmSLP-3, has been identified on the surface of hemorrhagic septicemia–associated strains of P. multocida and was previously shown to elicit robust protection in cattle against lethal challenge with a serogroup B strain.Methods: Here, we further investigate the protective efficacy of this surface lipoprotein, including evaluating the immunogenicity and protection upon formulation with a variety of adjuvants in both mice and cattle.Results: PmSLP-3 formulated with Montanide ISA 61 elicited the highest level of serum and mucosal IgG, elicited long-lasting serum antibodies, and was fully protective against serogroup B challenge. Studies were then performed to identify the minimum number of doses required and the needed protein quantity to maintain protection. Duration studies were performed in cattle, demonstrating sustained serum IgG titres for 3 years after two doses of vaccine and full protection against lethal serogroup B challenge at 7 months after a single vaccine dose. Finally, a serogroup E challenge study was performed, demonstrating that PmSLP-3 vaccine can provide protection against challenge by the two serogroups responsible for hemorrhagic septicemia.Conclusion: Together, these data indicate that PmSLP-3 formulated with Montanide ISA 61 is an immunogenic and protective vaccine against hemorrhagic septicemia-causing P. multocida strains in cattle.

3 August 2024 in Viruses
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Waktole YadetaWaktole Yadeta
Waktole Yadeta
EAElizabeth Amosun
Elizabeth Amosun
HEHawa Mohammed Ebrahim
Hawa Mohammed Ebrahim
WWWubet Weldemedhin Woldemichael
Wubet Weldemedhin Woldemichael
KNKedir Sherefa Nuri
Kedir Sherefa Nuri
Esayas GELAYE GELAYEEsayas GELAYE GELAYE
Esayas GELAYE GELAYE
Newcastle disease (ND) is caused by virulent strains of avian paramyxovirus type 1, also known as Newcastle disease virus (NDV). Despite vaccination, the frequency of reported outbreaks in Ethiopia has increased. From January to June 2022, an active outbreak investigation was conducted in six commercial chicken farms across areas of central Ethiopia to identify the circulating NDV strains. Thirty pooled tissue specimens were collected from chickens suspected of being infected with NDV. A questionnaire survey of farm owners and veterinarians was also carried out to collect information on the farms and the outbreak status. NDV was isolated using specific-pathogen-free (SPF)-embryonated chicken eggs and detected using haemagglutination and the reverse transcriptase–polymerase chain reaction (RT–PCR). The genotype and virulence of field NDV isolates were determined using phylogenetic analysis of fusion (F) protein gene sequences and the mean death time (MDT) test in SPF-embryonated chicken eggs. The questionnaire results revealed that ND caused morbidity (23.1%), mortality (16.3%), case fatality (70.8%), and significant economic losses. Eleven of thirty tissue specimens tested positive for NDV using haemagglutination and RT–PCR. The MDT testing and sequence analysis revealed the presence of virulent NDV classified as genotype VII of class II velogenic pathotype and distinct from locally used vaccine strains (genotype II). The amino acid sequences of the current virulent NDV fusion protein cleavage site motif revealed 112RRQKR↓F117, unlike the locally used avirulent vaccine strains (112GRQGR↓L117). The epidemiological data, MDT results, cleavage site sequence, and phylogenetic analysis all indicated that the present NDV isolates were virulent. The four NDV sequences were deposited in GenBank with accession numbers F gene (PP726912-15) and M gene (PP726916-19). The genetic difference between avirulent vaccine strains and circulating virulent NDV could explain the low level of protection provided by locally used vaccines. Further studies are needed to better understand the circulating NDV genotypes in different production systems.

26 May 2026 in Viruses
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Journal Article
Open access
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Abdurezak AbrarAbdurezak Abrar
Abdurezak Abrar
FBFufa D Bari
Fufa D Bari
KAKassaye Adamu
Kassaye Adamu
KHKenaw Birhanu - Haile
Kenaw Birhanu - Haile
JSJaleta Shuka
Jaleta Shuka
TATakele Abayneh
Takele Abayneh
An outbreak investigation of camelpox in dromedary camels (Camelus dromedarius) was conducted from October 2024 to May 2025 in Borena Zone, Ethiopia, with the aims of isolating, confirming the etiology and molecular characterization of camelpox virus from outbreak cases. The study integrated clinical assessment, virus isolation using Vero cell lines, and molecular characterization using conventional PCR, real-time PCR, sequencing and phylogenetic analysis. Clinically affected camels manifested typical pox-like lesions, fever and swollen lymph nodes, with a morbidity rate of 33.8% (24/71) and a case fatality rate of 4.2% (1/24). The virus was successfully isolated showing typical cytopathic effects of rounding of cells, syncytia, giant cell formation, aggregation and detachment. Conventional PCR targeting A-type inclusion protein (ATIP) gene amplified the expected 881 bp fragment with 26.3% positivity in both skin scab and nasal swab samples. Real-time PCR employing high-resolution melting curve analysis detected the viral DNA in 52.6% of samples with a melting temperature of 73.00 ± 0.20 °C for CMPV. Sequencing of the ATIP gene showed 100% nucleotide similarity with reference CMPV strains of CMPV M-96, CMPV CMS, strain 0408151v and CMPV genome (NC_003391), although a single nucleotide variation was noted when compared to the previously reported Ethiopian isolates (KU705085-KU705110) and Israeli isolates (MK910851 and MZ300856), and two nucleotide mismatches were observed with Sudanese isolates (KT931624 and KT931625). Phylogenetic analysis revealed that the current isolates clustered with CMPV strains of CMPV M-96, CMPV CMS, strain 0408151v and others but were distinct from previously reported Ethiopian isolates. This study provides significant insights on early diagnosis and control strategies.