Arsenic, a global pollutant and a threshold-free primary carcinogen, can accumulate in rice. Previous studies have focused on arsenic poisoning in drinking water and the effects on gut microbes. The research on arseniasis through food, which involves the bio-transformation of arsenic, and the related changes in gut microbiome is insufficient. Mice were exposed from animal feed prepared with four arsenic species (iAsIII, iAsV, MMA, and DMA) at a dose of 30 mg/kg according to the arsenic species proportion in rice for 30 days and 60 days. The levels of total arsenic (tAs) and arsenic species in mice feces and urine samples were determined using ICP-MS and HPLC-ICP-MS, respectively. 16S rRNA and ITS gene sequencing were conducted on microbial DNA extracted from the feces samples. At 30 days and 60 days exposure, the tAs levels excreted from urine were 0.0092 and 0.0093 mg/day, and tAs levels in feces were 0.0441 and 0.0409 mg/day, respectively. We found significant differences in arsenic species distribution in urine and feces (p < 0.05). In urine, the predominant arsenic species were iAsIII (23% and 14%, respectively), DMA (55% and 70%, respectively), and uAs (unknown arsenic, 14% and 10%, respectively). In feces, the proportion of major arsenic species (iAsV, 26% and 21%; iAsIII, 16% and 15%; MMA, 14% and 14%; DMA, 19% and 19%; and uAs, 22% and 29%, respectively) were evenly distributed. Microbiological analysis (MRPP test, α- and β-diversities) showed that diversity of gut bacteria was significantly related to arsenic exposure through food, but diversity of gut fungi is less affected. Manhattan plot and LEfSe analysis showed that arsenic exposure significantly changes microbial taxa, which might be directly associated with arsenic metabolism and diseases mediated by arsenic exposure, such as Deltaproteobacteria, Polynucleobacter, Saccharomyces, Candida, Amanitaceae, and Fusarium. Network analysis was used to identify the changing hub taxa in feces along with arsenic exposure. Function predicting analysis indicated that arsenic exposure might also significantly increase differential metabolic pathways and would disturb carbohydrates, lipid, and amino acids metabolism of gut bacteria. The results demonstrate that subchronic arsenic exposure via food significantly changes the gut microbiome, and the toxicity of arsenic in food, especially in staples, should be comprehensively evaluated in terms of the disturbance of microbiome, and feces might be the main pathway through which arsenic from food exposure is excreted and bio-transformed, providing a new insight into the investigation of bio-detoxification for arseniasis.

Biodegradable plastics, as alternatives to conventional waste plastics, are increasingly applied across various fields. However, the ecological risks associated with the widespread use of biodegradable plastics remain unclear. Additionally, biodegradable plastics tend to age in the environment, leading to changes in their physicochemical properties. The ecological risks brought by the aging of microplastics have also been scarcely studied. In this study, we selected conventional microplastics (PE-MPs), biodegradable microplastics (PLA-MPs), and aged biodegradable microplastics (aging-PLA-MPs) to explore their effects on the rhizosphere soil environment of rice. The results showed that microplastics reduced the soil N and P content, with PE slightly increasing the DOC content, while PLA and aging-PLA significantly increased DOC by 21.13 and 24.04%, respectively. Microplastics also decreased soil enzyme activity, with aging-PLA having a somewhat stimulatory effect on enzyme activity compared to PLA. Furthermore, microplastics reduced the soil bacterial diversity index and altered the community structure of dominant bacterial species, with DOC content and FDA hydrolase being the main factors influencing the soil bacterial community. Bacteria were most sensitive to PLA, and the stability of the bacterial microbial network structure decreased, although aging reduced the negative impact of PLA on the bacterial community. This study contributes to our understanding of the ecological risks posed by biodegradable plastics and their aging processes on the environment.

Here, we report the draft annotated genome sequence of Streptomyces mobaraensis strain DSM 40847, which is used in industry to produce microbial transglutaminase. The genome sequence will allow for the characterization of the molecular mechanisms underlying the beneficial properties of this organism.

Fusarium root rot (FRR) caused by Fusarium graminearum poses a threat to global food security. Biological control is a promising control strategy for FRR. In this study, antagonistic bacteria were obtained using an in-vitro dual culture bioassay with F. graminearum. Molecular identification of the bacteria based on the 16S rDNA gene and whole genome revealed that the species belonged to the genus Bacillus. We evaluated the strain BS45 for its mechanism against phytopathogenic fungi and its biocontrol potential against FRR caused by F. graminearum. A methanol extract of BS45 caused swelling of the hyphal cells and the inhibition of conidial germination. The cell membrane was damaged and the macromolecular material leaked out of cells. In addition, the mycelial reactive oxygen species level increased, mitochondrial membrane potential decreased, oxidative stress-related gene expression level increased and oxygen-scavenging enzyme activity changed. In conclusion, the methanol extract of BS45 induced hyphal cell death through oxidative damage. A transcriptome analysis showed that differentially expressed genes were significantly enriched in ribosome function and various amino acid transport pathways, and the protein contents in cells were affected by the methanol extract of BS45, indicating that it interfered with mycelial protein synthesis. In terms of biocontrol capacity, the biomass of wheat seedlings treated with the bacteria increased, and the BS45 strain significantly inhibited the incidence of FRR disease in greenhouse tests. Therefore, strain BS45 and its metabolites are promising candidates for the biological control of F. graminearum and its related root rot diseases.

Huperzia serrata is a Huperzine A (HupA)-producing herb. HupA is a potent, reversible, highly specific, centrally active and selective acetylcholinesterase inhibitor, and is commonly used to improve Alzheimer’s disease.At present, H. serrata resources have been overexploited and their artificial cultivation has lagged behind the need, so the market demand cannot be met. In this study, the diversity of the endophytic fungi in H. serrata was studied by high-throughput sequencing and traditional culture methods. Furthermore, the ability of the isolated endophytic fungi to produce acetylcholinesterase-inhibiting activity was evaluated. The results related to the diversity of fungi between high-throughput sequencing and traditional culture methods were compared. With high-throughput sequencing, five phyla, 22 classes, 55 orders, 120 families, and 178 genera of fungi were detected in Hubei Province, and five phyla, 22 classes, 54 orders, 124 families, and 196 genera were detected in Fujian Province. After cultivation with traditional culture methods, two phyla, three classes, five orders, six families, and six genera were detected in Hubei, and one phylum, three classes, five orders, five families, and six genera in Fujian. The endophytic fungi of H. serrata are highly diverse, and the results of high-throughput sequencing comprehensively reflect their community compositions. When the acetylcholinesterase-inhibiting activity of the isolated and cultured endophytic fungi was determined, five and three endophytic fungi from Hubei and Fujian Provinces, respectively, had good inhibitory activity (inhibition rate > 50%). Most of them were separated from leaf tissue. The strain HBR-1 and strain FJL-5 had the strongest inhibitory effects on AChE, with inhibition rates of 72.34% and 60.54%, respectively. Although only a proportion of the endophytic fungi was isolated with traditional culture methods, metabolites with broad potential applications can be isolated from these fungal cultures. The combination of high-throughput sequencing and traditional culture methods can be used to isolate and purify endophytic fungi in a targeted manner, gain many endophytic fungi, and enrich the endophytic fungi resource library.