Iris Celebi

Ms. Iris Celebi

Boston University
orcid

Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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14 November 2024 in Biosensors and Bioelectronics
Verified
Journal Article
Open access
MAMete Aslan
Mete Aslan
ESElif Seymour
Elif Seymour
HBHoward Brickner
Howard Brickner
ACAlex E. Clark
Alex E. Clark
Iris CelebiIris Celebi
Iris Celebi
Partha RayPartha Ray
Partha Ray
Diagnostic approaches that combine the high sensitivity and specificity of laboratory-based digital detection with the ease of use and affordability of point-of-care (POC) technologies could revolutionize disease diagnostics. This is especially true in infectious disease diagnostics, where rapid and accurate pathogen detection is critical to curbing the spread of disease. We have pioneered an innovative label-free digital detection platform that utilizes Interferometric Reflectance Imaging Sensor (IRIS) technology. IRIS leverages light interference from an optically transparent thin film, eliminating the need for complex optical resonances to enhance the signal by harnessing light interference and the power of signal averaging in shot-noise-limited operation In our latest work, we have further improved our previous 'Single-Particle' IRIS (SP-IRIS) technology by allowing the construction of the optical signature of target nanoparticles (whole virus) from a single image. This new platform, 'Pixel-Diversity' IRIS (PD-IRIS), eliminated the need for z-scan acquisition, required in SP-IRIS, a time-consuming and expensive process, and made our technology more applicable to POC settings. Using PD-IRIS, we quantitatively detected the Monkeypox virus (MPXV), the etiological agent for Monkeypox (Mpox) infection. MPXV was captured by anti-A29 monoclonal antibody (mAb 69-126-3) on Protein G spots on the sensor chips and were detected at a limit-of-detection (LOD) - of 200 PFU/mL (∼3.3 aM). PD-IRIS was superior to the laboratory-based ELISA (LOD - 1800 PFU/mL) used as a comparator. The specificity of PD-IRIS in MPXV detection was demonstrated using Herpes simplex virus, type 1 (HSV-1), and Cowpox virus (CPXV). This work establishes the effectiveness of PD-IRIS and opens possibilities for its advancement in clinical diagnostics of Mpox at POC. Moreover, PD-IRIS is a modular technology that can be adapted for the multiplex detection of pathogens for which high-affinity ligands are available that can bind their surface antigens to capture them on the sensor surface.

4 January 2022 in Biosensors and Bioelectronics
Verified
Journal Article
Closed access
MBMonireh Bakhshpour
Monireh Bakhshpour
ECElisa Chiodi
Elisa Chiodi
Iris CelebiIris Celebi
Iris Celebi
YSYeşeren Saylan
Yeşeren Saylan
NÜNese Lortlar Ünlü
Nese Lortlar Ünlü
Adil DenizliAdil Denizli
Adil Denizli

18 October 2023 in PLOS ONE
Verified
Journal Article
Open access
PDF file
Iris CelebiIris Celebi
Iris Celebi
MAMete Aslan
Mete Aslan
Selim ÜnlüSelim Ünlü
Selim Ünlü
Illumination uniformity is a critical parameter for excitation and data extraction quality in widefield biological imaging applications. However, typical imaging systems suffer from spatial and spectral non-uniformity due to non-ideal optical elements, thus require complex solutions for illumination corrections. We present Effective Uniform Color-Light Integration Device (EUCLID), a simple and cost-effective illumination source for uniformity corrections. EUCLID employs a diffuse-reflective, adjustable hollow cavity that allows for uniform mixing of light from discrete light sources and modifies the source field distribution to compensate for spatial non-uniformity introduced by optical components in the imaging system. In this study, we characterize the light coupling efficiency of the proposed design and compare the uniformity performance with the conventional method. EUCLID demonstrates a remarkable illumination improvement for multi-spectral imaging in both Nelsonian and Koehler alignment with a maximum spatial deviation of ≈ 1% across a wide field-of-view.

29 October 2020 in Biosensors
Verified
Journal Article
Open access
PDF file
Iris CelebiIris Celebi
Iris Celebi
MGMatthew T. Geib
Matthew T. Geib
Elisa ChiodiElisa Chiodi
Elisa Chiodi
NUNese Unlu
Nese Unlu
FKFulya Ekiz Kanik
Fulya Ekiz Kanik
Selim ÜnlüSelim Ünlü
Selim Ünlü
Protein microarrays have gained popularity as an attractive tool for various fields, including drug and biomarker development, and diagnostics. Thus, multiplexed binding affinity measurements in microarray format has become crucial. The preparation of microarray-based protein assays relies on precise dispensing of probe solutions to achieve efficient immobilization onto an active surface. The prohibitively high cost of equipment and the need for trained personnel to operate high complexity robotic spotters for microarray fabrication are significant detriments for researchers, especially for small laboratories with limited resources. Here, we present a low-cost, instrument-free dispensing technique by which users who are familiar with micropipetting can manually create multiplexed protein assays that show improved capture efficiency and noise level in comparison to that of the robotically spotted assays. In this study, we compare the efficiency of manually and robotically dispensed α-lactalbumin probe spots by analyzing the binding kinetics obtained from the interaction with anti-α-lactalbumin antibodies, using the interferometric reflectance imaging sensor platform. We show that the protein arrays prepared by micropipette manual spotting meet and exceed the performance of those prepared by state-of-the-art robotic spotters. These instrument-free protein assays have a higher binding signal (~4-fold improvement) and a ~3-fold better signal-to-noise ratio (SNR) in binding curves, when compared to the data acquired by averaging 75 robotic spots corresponding to the same effective sensor surface area. We demonstrate the potential of determining antigen-antibody binding coefficients in a 24-multiplexed chip format with less than 5% measurement error.

15 October 2020 in ChemRxiv
Verified
Preprint
Open access
PDF file
Iris CelebiIris Celebi
Iris Celebi
MGMatthew T. Geib
Matthew T. Geib
ECElisa Chiodi
Elisa Chiodi
NÜNese Lortlar Ünlü
Nese Lortlar Ünlü
FKFulya Ekiz Kanik
Fulya Ekiz Kanik
MÜM. Selim Ünlü
M. Selim Ünlü
Protein microarrays have gained popularity as an attractive tool for various fields, including drug and biomarker development, and diagnostics. Thus, multiplexed binding affinity measurements in microarray format has become crucial. The preparation of microarray-based protein assays relies on precise dispensing of probe solutions to achieve efficient immobilization onto an active surface. The prohibitively high cost of equipment and the need for trained personnel to operate high complexity robotic spotters for microarray fabrication are significant detriments for researchers, especially for small laboratories with limited resources. Here, we present a low-cost, instrument-free dispensing technique by which users who are familiar with micropipetting can manually create multiplexed protein assays that show improved capture efficiency and noise level in comparison to that of the robotically spotted assays. In this study, we compare the efficiency of manually and robotically dispensed α-Lactalbumin probe spots by analyzing the binding kinetics obtained from the interaction with anti-α-Lactalbumin antibodies, using the interferometric reflectance imaging sensor platform. We show that the protein arrays prepared by micropipette manual spotting meet and exceed the performance of those prepared by state-of-the-art robotic spotters. These instrument-free protein assays have higher binding signal (~4-fold improvement) and a ~3-fold better signal-to-noise ratio (SNR) in binding curves, when compared to the data acquired by averaging of 75 robotic spots corresponding to the same effective sensor surface area. We demonstrate the potential of determining antigen-antibody binding coefficients in 24-multiplexed chip format with less than 5% measurement error.

1 January 2023
Verified
Conference Paper
Closed access
PDF file
MAMete Aslan
Mete Aslan
Iris CelebiIris Celebi
Iris Celebi
Selim ÜnlüSelim Ünlü
Selim Ünlü
We present a new digital biomolecule detection technique based on interferometric imaging of plasmonic gold nanorod labels. Post-processing of polarization camera readout allows for effective background rejection in a single snapshot.