Ken Chen

Dr. Ken Chen

Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA
orcid
Professor

Biography

Dr. Chen received his B.E. from Tsinghua University (Beijing), Ph.D. from University of Illinois at Urbana-Champaign, and postdoctoral training from University of California at San Diego. From 2005 to 2011, he worked for Washington University School of Medicine in St. Louis as a senior scientist and a research faculty. Having a background in machine learning, statistical signal processing, and cancer genomics, his primary goal is to develop computational tools to analyze and interpret human genomics and clinical data towards the realization of genomic medicine. Dr. Chen has designed, developed, and co-developed a set of computational tools such as BreakDancer, VarScan, and Monovar that have been widely applied to characterize individual and population genomics in various large-scale next-generation sequencing projects such as those in the Cancer Genome Atlas (TCGA) and the 1000 Genomes Project. He is particularly interested in comprehensively and accurately constructing the genomes and the transcriptomes of various cancer cell populations towards understanding the heterogeneity and the evolution of cancer as a consequence of genetics and environment. He is also interested in developing integrative (AI-based) approaches to identify biomarkers that are useful for diagnosis and prognosis. More information about his research group is available here.

Affiliations

The University of Texas MD Anderson Cancer Center

Houston, Texas, USA

Bioinformatics and Computational Biology

Honors and Awards

honor

Fellow

American Institute of Medical and Biological Engineering

honor

Fellow

Asia-Pacific Artificial Intelligence Association

Experience

Senior Scientist or Principal Investigator

The University of Texas MD Anderson Cancer Center, Houston, USA

01 Aug 2011 - present

Senior Scientist or Principal Investigator

Washington University Medical Center, St Louis, USA

01 May 2005 - 01 May 2011

Post Doctoral Researcher

University of California, San Diego, San Diego, USA

01 Jun 2004 - 01 May 2005

Graduate Student or Post Graduate

University of Illinois Urbana-Champaign, Urbana, USA

01 Sep 1999 - 01 May 2004

Undergraduate Student

Tsinghua University, Beijing, China

01 Sep 1991 - 01 Jul 1996