Dr. Chen received his B.E. from Tsinghua University (Beijing), Ph.D. from University of Illinois at Urbana-Champaign, and postdoctoral training from University of California at San Diego. From 2005 to 2011, he worked for Washington University School of Medicine in St. Louis as a senior scientist and a research faculty. Having a background in machine learning, statistical signal processing, and cancer genomics, his primary goal is to develop computational tools to analyze and interpret human genomics and clinical data towards the realization of genomic medicine. Dr. Chen has designed, developed, and co-developed a set of computational tools such as BreakDancer, VarScan, and Monovar that have been widely applied to characterize individual and population genomics in various large-scale next-generation sequencing projects such as those in the Cancer Genome Atlas (TCGA) and the 1000 Genomes Project. He is particularly interested in comprehensively and accurately constructing the genomes and the transcriptomes of various cancer cell populations towards understanding the heterogeneity and the evolution of cancer as a consequence of genetics and environment. He is also interested in developing integrative (AI-based) approaches to identify biomarkers that are useful for diagnosis and prognosis. More information about his research group is available here.
The University of Texas MD Anderson Cancer Center
Houston, Texas, USA
Bioinformatics and Computational Biology
Fellow
American Institute of Medical and Biological Engineering
Fellow
Asia-Pacific Artificial Intelligence Association
Senior Scientist or Principal Investigator
The University of Texas MD Anderson Cancer Center, Houston, USA
01 Aug 2011 - present
Senior Scientist or Principal Investigator
Washington University Medical Center, St Louis, USA
01 May 2005 - 01 May 2011
Post Doctoral Researcher
University of California, San Diego, San Diego, USA
01 Jun 2004 - 01 May 2005
Graduate Student or Post Graduate
University of Illinois Urbana-Champaign, Urbana, USA
01 Sep 1999 - 01 May 2004
Undergraduate Student
Tsinghua University, Beijing, China
01 Sep 1991 - 01 Jul 1996