Zhe Qu

Prof. Zhe Qu

Ocean University of China, Qingdao, Shandong, China

Research Focus & Metrics

Academic Career Length

3Years (2024-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 February 2025 in Antioxidants
Verified
Journal Article
Open access
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YGYilan Guo
Yilan Guo
JCJin Chaofan
Jin Chaofan
CWCun Wei
Cun Wei
KZKangning Zhong
Kangning Zhong
YGYurui Gao
Yurui Gao
JHJingjie Hu
Jingjie Hu
The leopard coral grouper (Plectropomus leopardus) is a commercially significant tropical marine species. With the ongoing effects of global climate change, increasing attention has been focused on leopard coral grouper’s susceptibility to extreme cold weather. This study investigates the effects of acute cold exposure and temperature recovery on the liver of P. leopardus. Histological observations and enzyme activity assays revealed that temperature fluctuations caused significant disruptions to normal liver physiology, including lipid accumulation and alterations in antioxidant levels. Transcriptomic analysis of liver tissue identified 2744 differentially expressed genes (DEGs) across three experimental groups: 25 °C (control), 13 °C (cold exposure), and rewarming at 25 °C (R-25 °C). Functional enrichment analysis revealed that these DEGs were significantly associated with biological processes such as lipid metabolism and antioxidant defense, as well as pathways related to metabolism, fatty acid biosynthesis, and ferroptosis. Furthermore, dynamic regulation of lipid metabolism, immune responses, and oxidative stress pathways was observed in response to both cold stress and rewarming. Notably, several redox-related DEGs were identified, and their interactions with lipid metabolism were further explored. Additionally, representative DEGs associated with antioxidants and lipid metabolism, such as got1, gpx1a, gpt, and g6pcla.2, were validated by qRT-PCR and fluorescence in situ hybridization (FISH). Taken together, this study provides a systematic analysis of the effects of acute cold exposure and temperature recovery stress on the liver of the leopard coral grouper, laying the groundwork for further research on the temperature stress responses in teleost species.

4 November 2024 in BMC Genomics
Verified
Journal Article
Open access
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YGYilan Guo
Yilan Guo
CWCun Wei
Cun Wei
HDHui Ding
Hui Ding
PLPeiyu Li
Peiyu Li
YGYurui Gao
Yurui Gao
JHJingjie Hu
Jingjie Hu
The leopard coral grouper (Plectropomus leopardus) is a commercially valuable tropical marine fish species known to be sensitive to low temperatures. A comprehensive understanding of the molecular mechanisms governing its response to acute cold stress is of great importance. However, there is a relative scarcity of fundamental research on low-temperature tolerance in the leopard coral grouper. In this study, a cooling and rewarming experiment was conducted on 6-month-old leopard coral groupers. Within 24 h, we decreased the ambient temperature from 25 °C to 13 °C and subsequently allowed it to naturally return to 25 °C. During this process, a comprehensive investigation of serum hormone levels, enzyme activity, and brain transcriptome analysis was performed. P. leopardus displayed a noticeable adaptive response to the initial temperature decrease by temporarily reducing its life activities. Our transcriptome analysis revealed that the differentially expressed genes (DEGs) were primarily concentrated in crucial pathways including the blood-brain barrier (BBB), inflammatory response, and coagulation cascade. In situ hybridization of claudin 15a (cldn15a), a key gene for BBB maintaining, further confirmed that exposure to low temperatures led to the disruption of the blood-brain barrier and stimulated a pronounced inflammatory reaction within the brain. Upon rewarming, there was a recovery of BBB integrity accompanied by the persistence of inflammation within the brain tissue. Our study reveals the complex interactions between blood-brain barrier function, inflammation, and recovery in P. leopardus during short-term temperature drops and rewarming. These findings provide valuable insights into the physiological responses of this species under cold stress conditions.

Verified
Journal Article
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ZYZhihui Yang
Zhihui Yang
XYXiaoliu Yang
Xiaoliu Yang
JDJiahao Du
Jiahao Du
CWCun Wei
Cun Wei
PLPingping Liu
Pingping Liu
ZQZhe Qu
Zhe Qu
Sexually dimorphic traits such as growth and body size are often found in various crustaceans. Methyl farnesoate (MF), the main active form of sesquiterpenoid hormone in crustaceans, plays vital roles in the regulation of their molting and reproduction. However, understanding on the sex differences in their hormonal regulation is limited. Here, we carried out a comprehensive investigation on sexual dimorphic responses to MF in the hepatopancreas of the most dominant aquacultural crustacean—the white-leg shrimp (Litopenaeus vannamei). Through comparative transcriptomic analysis of the main MF target tissue (hepatopancreas) from both female and male L. vannamei, two sets of sex-specific and four sets of sex–dose-specific differentially expressed transcripts (DETs) were identified after different doses of MF injection. Functional analysis of DETs showed that the male-specific DETs were mainly related to sugar and lipid metabolism, of which multiple chitinases were significantly up-regulated. In contrast, the female-specific DETs were mainly related to miRNA processing and immune responses. Further co-expression network analysis revealed 8 sex-specific response modules and 55 key regulatory transcripts, of which several key transcripts of genes related to energy metabolism and immune responses were identified, such as arginine kinase, tropomyosin, elongation of very long chain fatty acids protein 6, thioredoxin reductase, cysteine dioxygenase, lysosomal acid lipase, estradiol 17-beta-dehydrogenase 8, and sodium/potassium-transporting ATPase subunit alpha. Altogether, our study demonstrates the sex differences in the hormonal regulatory networks of L. vannamei, providing new insights into the molecular basis of MF regulatory mechanisms and sex dimorphism in prawn aquaculture.

7 April 2024 in Developmental & Comparative Immunology
Verified
Journal Article
Closed access
BZBo Zheng
Bo Zheng
GWGengzhuo Wang
Gengzhuo Wang
ZQZhe Qu
Zhe Qu
JHJingjie Hu
Jingjie Hu
ZBZhenmin Bao
Zhenmin Bao
MWMengqiang Wang
Mengqiang Wang

25 May 2025 in Antioxidants
Verified
Journal Article
Open access
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YCYing Chen
Ying Chen
XSXiaojuan Sun
Xiaojuan Sun
JDJiahao Du
Jiahao Du
JHJingjie Hu
Jingjie Hu
ZBZhenmin Bao
Zhenmin Bao
ZQZhe Qu
Zhe Qu
Sesquiterpenoid hormones are widely present in arthropods and play crucial roles in growth, molting and reproduction. Methyl farnesoate (MF) functions similarly to juvenile hormone (JH) in crustaceans, playing a broad regulatory role in their growth and development. However, compared to insects, systematic studies on the mechanisms of sesquiterpenoid hormones in crustaceans are still lacking. Neocaridina denticulata, a small freshwater shrimp known for its fast growth, high reproductive capacity and ease of maintenance, is an ideal model organism for crustacean research. To investigate the effects of MF on the growth and development of juvenile N. denticulata, MF feeding experiments were conducted and the changes at the phenotypic and molecular levels were examined. In this experiment, the basal diet was used as a control, with 40 μg/kg, 4 μg/kg and 0.4 μg/kg of MF added to the feed. The MF-enriched diets were fed to juvenile N. denticulata and the growth in body length was measured every 10 days. After 40 days of feeding experiment, the activities of amylase (AMS), lipase (LPS), trypsin (Try), superoxide dismutase (SOD), malondialdehyde (MDA) and glutathione peroxidase (GSH-PX) were assessed, and transcriptome analysis was performed. We found that MF showed an initial inhibitory effect on body length (day 30), but by day 40, the low-concentration group exhibited significantly enhanced growth compared to the control, indicating a dose- and time-dependent effect. Activities of AMS, LPS, Try and SOD generally decreased, whereas MDA levels and GSH-PX activity increased after 40 days of MF exposure. Moreover, transcriptomic analysis revealed that MF regulated various biological processes including growth, metabolism and immune responses. High concentration group appeared to restrict growth via modulation of exoskeleton-related and cellular stress genes. Medium concentration group enhanced growth by optimizing metabolic and signaling pathways. Low concentration group preferentially up-regulated genes related to muscle function, potentially supporting locomotion and competitive ability. This study provides new insights into the regulatory mechanism of sesquiterpenoid hormones in crustaceans and their potential applications in aquaculture in the future.

7 September 2025 in Biology
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Journal Article
Open access
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WLWenfeng Li
Wenfeng Li
AZAn-Qi Zhao
An-Qi Zhao
YCYan Chen
Yan Chen
ZYZhao-Yang Yin
Zhao-Yang Yin
YMYunxiang Mao
Yunxiang Mao
HHHai Huang
Hai Huang
The red-claw crayfish Cherax quadricarinatus has been widely introduced and cultured in China and has become a crucial economic freshwater species. However, individuals reared from the same batch of seedlings in uniform aquaculture systems exhibit significant size variation within and between genders, which notably impedes the optimization of both their quality and yield. Gut microbiota plays an important role in the metabolism, development, and immunity of aquatic animals. However, the knowledge on the intestinal microbiota of red-claw crayfish with various sizes and genders is poor. In this study, the intestinal microbiota of red-claw crayfish cultured in consistent farming conditions were separated to larger-sized female (GUBF), larger-sized male (GUBM), smaller-sized female (GUSF), and smaller-sized male (GUSM) groups based on their body size (weight) and gender, before being analyzed via high-throughput 16S rRNA gene sequencing. The intestinal microbiota results showed that alpha diversity tended to generally decrease in the order of GUBF, GUBM, GUSF, and GUSM, indicating that the richness and evenness of the gut flora were gradually improved with the increase in body weight or from male to female. Community richness and diversity were highest in the GUBF group, followed by the GUBM, GUSF, and GUSM groups, respectively. Beta diversity indicated significant differences in gut microbiota between the GUBF and GUSF, GUBM and GUSM, GUBF, and GUBM groups. Further analysis showed that the dominant phyla in the intestine of the red-claw crayfish were Firmicutes, Proteobacteria, Fusobacteriota, Bacteroidota, and Deinococcota, and the dominant genera were Vibrio, Tyzzerella, Candidatus Bacilloplasma, Citrobacter, and Candidatus Hepatoplasma. Moreover, nine phyla and 106 genera were identified to be significantly different in abundance among all four groups. Pairwise comparisons revealed that the phylum Dependentiae and Planctomycetota and genus Babeliaceae_unclassified were significantly abundant in the gut of female crayfishes, regardless of body size. On the other hand, irrespective of genders, the abundance of Novosphingobium, Piscinibacter, and Citrobacter was significantly increased or declined in the larger or smaller crayfishes, respectively. PICRUSt2 analysis based on the KEGG database suggested that the pathway bacterial secretion system, isoflavonoid biosynthesis, and pathway glycerolipid metabolism were significantly up- and down-regulated in female individuals, respectively, regardless of body sizes. Meanwhile, the adipocytokine signaling pathway, pyruvate metabolism, and pathway electron transfer carriers were significantly up- and down-regulated in larger individuals, respectively, regardless of gender. Gender differences may induce gut microbiota to exert a greater impact on hormonal regulation, whereas differences in individual size seem to lead gut microbiota to develop a preference for food intake and energy sources. In summary, this study revealed key differences in the intestinal microbiota of the crayfish with different sizes and genders, even in those which were cultured in the same environment and period, which potentially suggest that the intestinal microbiota may be influenced by some other factors in the culture system, such as hormone secretion, metabolism, and immunity. This study will contribute to improving growth performance and animal quality in the aquaculture of C. quadricarinatus.