Chandrabose Selvaraj

Prof. Chandrabose Selvaraj

Department of Bioinformatics, Alagappa University
orcid

Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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27 August 2020 in Journal of Biomolecular Structure and Dynamics
Verified
Journal Article
Closed access
PSPriya Shree
Priya Shree
PMPriyanka Mishra
Priyanka Mishra
Chandrabose SelvarajChandrabose Selvaraj
Chandrabose Selvaraj
SSSanjeev Kumar Singh
Sanjeev Kumar Singh
RCRadha Chaube
Radha Chaube
PTProf. Yamini Bhusan Tripathi
Prof. Yamini Bhusan Tripathi
COVID-19 (Coronavirus disease 2019) is a transmissible disease initiated and propagated through a new virus strain SARS-CoV-2 (Severe Acute Respiratory Syndrome Coronavirus-2) since 31st December 2019 in Wuhan city of China and the infection has outspread globally influencing millions of people. Here, an attempt was made to recognize natural phytochemicals from medicinal plants, in order to reutilize them against COVID-19 by the virtue of molecular docking and molecular dynamics (MD) simulation study. Molecular docking study showed six probable inhibitors against SARS-CoV-2 Mpro (Main protease), two from Withania somnifera (Ashwagandha) (Withanoside V [10.32 kcal/mol] and Somniferine [9.62 kcal/mol]), one from Tinospora cordifolia (Giloy) (Tinocordiside [8.10 kcal/mol]) and three from Ocimum sanctum (Tulsi) (Vicenin [8.97 kcal/mol], Isorientin 4′-O-glucoside 2″-O-p-hydroxybenzoagte [8.55 kcal/mol] and Ursolic acid [8.52 kcal/mol]). ADMET profile prediction showed that the best docked phytochemicals from present work were safe and possesses drug-like properties. Further MD simulation study was performed to assess the constancy of docked complexes and found stable. Hence from present study it could be suggested that active phytochemicals from medicinal plants could potentially inhibit Mpro of SARS-CoV-2 and further equip the management strategy against COVID-19-a global contagion. Communicated by Ramaswamy H. Sarma

1 February 2020 in Environmental Health Perspectives
Verified
Journal Article
Open access
KMKamel Mansouri
Kamel Mansouri
NKNicole Kleinstreuer
Nicole Kleinstreuer
AAAhmed M. Abdelaziz
Ahmed M. Abdelaziz
DADomenico Alberga
Domenico Alberga
VAVinicius Alves
Vinicius Alves
RJRichard Judson
Richard Judson
Environmental Health Perspectives is an Open Access journal published by the National Institute of Environmental Health Sciences. Environmental Health Perspectives is an Open Access journal published by the National Institute of Environmental Health Sciences.

23 October 2021 in Molecular Diversity
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Journal Article
Closed access
PDF file
Chandrabose SelvarajChandrabose Selvaraj
Chandrabose Selvaraj
ICIshwar Chandra
Ishwar Chandra
SSSanjeev Kumar Singh
Sanjeev Kumar Singh

2 May 2020 in Journal of Biomolecular Structure and Dynamics
Verified
Journal Article
Closed access
Umesh -Umesh -
Umesh -
DKDebanjan Kundu
Debanjan Kundu
Chandrabose SelvarajChandrabose Selvaraj
Chandrabose Selvaraj
SSSanjeev Kumar Singh
Sanjeev Kumar Singh
VDVikash Kumar Dubey
Vikash Kumar Dubey
The 2019-novel coronavirus (nCoV) has caused a global health crisis by causing coronavirus disease-19 (COVID-19) pandemic in the human population. The unavailability of specific vaccines and anti-viral drug for nCoV, science demands sincere efforts in the field of drug design and discovery for COVID-19. The novel coronavirus main protease (SARS-CoV-2 Mpro) play a crucial role during the disease propagation, and hence SARS-CoV-2 Mpro represents as a drug target for the drug discovery. Herein, we have applied bioinformatics approach for screening of chemical compounds from Indian spices as potent inhibitors of SARS-CoV-2 main protease (PDBID: 6Y84). The structure files of Indian spices chemical compounds were taken from PubChem database or Zinc database and screened by molecular docking, by using AutoDock-4.2, MGLTools-1.5.6, Raccoon virtual screening tools. Top 04 hits based on their highest binding affinity were analyzed. Carnosol exhibited highest binding affinity -8.2 Kcal/mol and strong and stable interactions with the amino acid residues present on the active site of SARS-CoV-2 Mpro. Arjunglucoside-I (-7.88 Kcal/mol) and Rosmanol (-7.99 Kcal/mol) also showed a strong and stable binding affinity with favourable ADME properties. These compounds on MD simulations for 50 ns shows strong hydrogen-bonding interactions with the protein active site and remains stable inside the active site. Our virtual screening results suggest that these small chemical molecules can be used as potential inhibitors against SARS-CoV-2 Mpro and may have an anti-viral effect on nCoV. However, further validation and investigation of these inhibitors against SARS-CoV-2 main protease are needed to claim their candidacy for clinical trials. Communicated by Ramaswamy H. Sarma

19 June 2020 in Molecules
Verified
Journal Article
Open access
PDF file
ITIgor Tvaroška
Igor Tvaroška
Chandrabose SelvarajChandrabose Selvaraj
Chandrabose Selvaraj
JKJaroslav Koča
Jaroslav Koča
Selectins belong to a group of adhesion molecules that fulfill an essential role in immune and inflammatory responses and tissue healing. Selectins are glycoproteins that decode the information carried by glycan structures, and non-covalent interactions of selectins with these glycan structures mediate biological processes. The sialylated and fucosylated tetrasaccharide sLex is an essential glycan recognized by selectins. Several glycosyltransferases are responsible for the biosynthesis of the sLex tetrasaccharide. Selectins are involved in a sequence of interactions of circulated leukocytes with endothelial cells in the blood called the adhesion cascade. Recently, it has become evident that cancer cells utilize a similar adhesion cascade to promote metastases. However, like Dr. Jekyll and Mr. Hyde’s two faces, selectins also contribute to tissue destruction during some infections and inflammatory diseases. The most prominent function of selectins is associated with the initial stage of the leukocyte adhesion cascade, in which selectin binding enables tethering and rolling. The first adhesive event occurs through specific non-covalent interactions between selectins and their ligands, with glycans functioning as an interface between leukocytes or cancer cells and the endothelium. Targeting these interactions remains a principal strategy aimed at developing new therapies for the treatment of immune and inflammatory disorders and cancer. In this review, we will survey the significant contributions to and the current status of the understanding of the structure of selectins and the role of selectins in various biological processes. The potential of selectins and their ligands as therapeutic targets in chronic and acute inflammatory diseases and cancer will also be discussed. We will emphasize the structural characteristic of selectins and the catalytic mechanisms of glycosyltransferases involved in the biosynthesis of glycan recognition determinants. Furthermore, recent achievements in the synthesis of selectin inhibitors will be reviewed with a focus on the various strategies used for the development of glycosyltransferase inhibitors, including substrate analog inhibitors and transition state analog inhibitors, which are based on knowledge of the catalytic mechanism.

1 November 2016 in Fuel
Verified
Journal Article
Closed access
SDSaurabh Dhiman
Saurabh Dhiman
Chandrabose SelvarajChandrabose Selvaraj
Chandrabose Selvaraj
JLJinglin Li
Jinglin Li
RSRanjitha Singh
Ranjitha Singh
XZXin Zhao
Xin Zhao
JLJung-Kul Lee
Jung-Kul Lee