Shyam Diwakar

Dr. Shyam Diwakar

Amrita Mind Brain Center, Amrita Vishwa Vidyapeetham, Kollam, India
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Happiness is a decision.

Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 August 2007 in Neuron
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Journal Article
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MGMitchell Goldfarb
Mitchell Goldfarb
JSJon Schoorlemmer
Jon Schoorlemmer
AWAnthony Williams
Anthony Williams
Shyam DiwakarShyam Diwakar
Shyam Diwakar
QWQing Wang
Qing Wang
EDEgidio D'Angelo
Egidio D'Angelo

1 February 2009 in Journal of Neurophysiology
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Journal Article
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Shyam DiwakarShyam Diwakar
Shyam Diwakar
JMJacopo Magistretti
Jacopo Magistretti
MGMitchell Goldfarb
Mitchell Goldfarb
GNGiovanni Naldi
Giovanni Naldi
EDEgidio D'Angelo
Egidio D'Angelo
In most neurons, Na+channels in the axon are complemented by others localized in the soma and dendrites to ensure spike back-propagation. However, cerebellar granule cells are neurons with simplified architecture in which the dendrites are short and unbranched and a single thin ascending axon travels toward the molecular layer before bifurcating into parallel fibers. Here we show that in cerebellar granule cells, Na+channels are enriched in the axon, especially in the hillock, but almost absent from soma and dendrites. The impact of this channel distribution on neuronal electroresponsiveness was investigated by multi-compartmental modeling. Numerical simulations indicated that granule cells have a compact electrotonic structure allowing excitatory postsynaptic potentials to diffuse with little attenuation from dendrites to axon. The spike arose almost simultaneously along the whole axonal ascending branch and invaded the hillock the activation of which promoted spike back-propagation with marginal delay (<200 μs) and attenuation (<20 mV) into the somato-dendritic compartment. These properties allow granule cells to perform sub-millisecond coincidence detection of pre- and postsynaptic activity and to rapidly activate Purkinje cells contacted by the axonal ascending branch.

9 June 2021 in Education and Information Technologies
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Journal Article
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RRRakhi Radhamani
Rakhi Radhamani
DKDhanush Kumar
Dhanush Kumar
NNNijin Nizar
Nijin Nizar
KAKrishnashree Achuthan
Krishnashree Achuthan
BNBipin Nair
Bipin Nair
Shyam DiwakarShyam Diwakar
Shyam Diwakar

3 August 2017 in Education and Information Technologies
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Journal Article
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KAKrishnashree Achuthan
Krishnashree Achuthan
SFSaneesh P. Francis
Saneesh P. Francis
Shyam DiwakarShyam Diwakar
Shyam Diwakar

19 July 2011 in PLOS ONE
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Journal Article
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Shyam DiwakarShyam Diwakar
Shyam Diwakar
PLPaola Lombardo
Paola Lombardo
SSSergio Solinas
Sergio Solinas
GNGiovanni Naldi
Giovanni Naldi
EDEgidio D'Angelo
Egidio D'Angelo
Local field-potentials (LFPs) are generated by neuronal ensembles and contain information about the activity of single neurons. Here, the LFPs of the cerebellar granular layer and their changes during long-term synaptic plasticity (LTP and LTD) were recorded in response to punctate facial stimulation in the rat in vivo. The LFP comprised a trigeminal (T) and a cortical (C) wave. T and C, which derived from independent granule cell clusters, co-varied during LTP and LTD. To extract information about the underlying cellular activities, the LFP was reconstructed using a repetitive convolution (ReConv) of the extracellular potential generated by a detailed multicompartmental model of the granule cell. The mossy fiber input patterns were determined using a Blind Source Separation (BSS) algorithm. The major component of the LFP was generated by the granule cell spike Na+ current, which caused a powerful sink in the axon initial segment with the source located in the soma and dendrites. Reproducing the LFP changes observed during LTP and LTD required modifications in both release probability and intrinsic excitability at the mossy fiber-granule cells relay. Synaptic plasticity and Golgi cell feed-forward inhibition proved critical for controlling the percentage of active granule cells, which was 11% in standard conditions but ranged from 3% during LTD to 21% during LTP and raised over 50% when inhibition was reduced. The emerging picture is that of independent (but neighboring) trigeminal and cortical channels, in which synaptic plasticity and feed-forward inhibition effectively regulate the number of discharging granule cells and emitted spikes generating “dense” activity clusters in the cerebellar granular layer.

28 June 2016 in Frontiers in Computational Neuroscience
Verified
Journal Article
Open access
HPHarilal Parasuram
Harilal Parasuram
BNBipin G Nair
Bipin G Nair
EDEgidio D'ANgelo
Egidio D'ANgelo
MHMichael Hines
Michael Hines
GNGiovanni Naldi
Giovanni Naldi
Shyam DiwakarShyam Diwakar
Shyam Diwakar
Local Field Potentials (LFPs) are population signals generated by complex spatiotemporal interaction of current sources and dipoles. Mathematical computations of LFPs allow the study of circuit functions and dysfunctions via simulations. This paper introduces LFPsim, a NEURON-based tool for computing population LFP activity and single neuron extracellular potentials. LFPsim was developed to be used on existing cable compartmental neuron and network models. Point source, line source, and RC based filter approximations can be used to compute extracellular activity. As a demonstration of efficient implementation, we showcase LFPs from mathematical models of electrotonically compact cerebellum granule neurons and morphologically complex neurons of the neocortical column. LFPsim reproduced neocortical LFP at 8Hz, 32Hz and 56 Hz via current injection, in vitro postsynaptic N2a, N2b waves and in vivo T-C waves in cerebellum granular layer. LFPsim also includes a simulation of multi-electrode array of LFPs in network populations to aid computational inference between biophysical activity in neural networks and corresponding multi-unit activity resulting in extracellular and evoked LFP signals.