Sijing Li

Dr. Sijing Li

Dali University, Dali, Shaanxi, China
orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
30 January 2021 in Journal of Oncology
Verified
Journal Article
Open access
PDF file
JTJianye Tan
Jianye Tan
HLHaofeng Liang
Haofeng Liang
BYBingsheng Yang
Bingsheng Yang
SZShuang Zhu
Shuang Zhu
GWGuofeng Wu
Guofeng Wu
LLLijun Lin
Lijun Lin
Osteosarcoma (OS) often occurs in children and often undergoes metastasis, resulting in lower survival rates. Information on the complexity and pathogenic mechanism of OS is limited, and thus, the development of treatments involving alternative molecular and genetic targets is hampered. We categorized transcriptome data into metastasis and nonmetastasis groups, and 400 differential RNAs (230 messenger RNAs (mRNAs) and 170 long noncoding RNAs (lncRNAs)) were obtained by the edgeR package. Prognostic genes were identified by performing univariate Cox regression analysis and the Kaplan–Meier (KM) survival analysis. We then examined the correlation between the expression level of prognostic lncRNAs and mRNAs. Furthermore, microRNAs (miRNAs) corresponding to the coexpression of lncRNA-mRNA was predicted, which was used to construct a competitive endogenous RNA (ceRNA) regulatory network. Finally, multivariate Cox proportional risk regression analysis was used to identify hub prognostic genes. Three hub prognostic genes (ABCG8, LOXL4, and PDE1B) were identified as potential prognostic biomarkers and therapeutic targets for OS. Furthermore, transcriptions factors (TFs) (DBP, ESX1, FOS, FOXI1, MEF2C, NFE2, and OTX2) and lncRNAs (RP11-357H14.16, RP11-284N8.3, and RP11-629G13.1) that were able to affect the expression levels of genes before and after transcription were found to regulate the prognostic hub genes. In addition, we identified drugs related to the prognostic hub genes, which may have potential clinical applications. Immunohistochemistry (IHC) and quantitative real-time polymerase chain reaction (qRT-PCR) confirmed that the expression levels of ABCG8, LOXL4, and PDE1B coincided with the results of bioinformatics analysis. Moreover, the relationship between the hub prognostic gene expression and patient prognosis was also validated. Our study elucidated the roles of three novel prognostic biomarkers in the pathogenesis of OS as well as presenting a potential clinical treatment for OS.

18 April 2022 in Cell Death & Disease
Verified
Journal Article
Open access
PDF file
GAGerasimos Anagnostopoulos
Gerasimos Anagnostopoulos
OGOmar Motiño Garcia-Miguel
Omar Motiño Garcia-Miguel
SLSijing Li
Sijing Li
VCVincent Carbonnier
Vincent Carbonnier
Hui ChenHui Chen
Hui Chen
Guido KroemerGuido Kroemer
Guido Kroemer
Acyl-coenzyme-A-binding protein (ACBP), also known as a diazepam-binding inhibitor (DBI), is a potent stimulator of appetite and lipogenesis. Bioinformatic analyses combined with systematic screens revealed that peroxisome proliferator-activated receptor gamma (PPARγ) is the transcription factor that best explains the ACBP/DBI upregulation in metabolically active organs including the liver and adipose tissue. The PPARγ agonist rosiglitazone-induced ACBP/DBI upregulation, as well as weight gain, that could be prevented by knockout of Acbp/Dbi in mice. Moreover, liver-specific knockdown of Pparg prevented the high-fat diet (HFD)-induced upregulation of circulating ACBP/DBI levels and reduced body weight gain. Conversely, knockout of Acbp/Dbi prevented the HFD-induced upregulation of PPARγ. Notably, a single amino acid substitution (F77I) in the γ2 subunit of gamma-aminobutyric acid A receptor (GABAAR), which abolishes ACBP/DBI binding to this receptor, prevented the HFD-induced weight gain, as well as the HFD-induced upregulation of ACBP/DBI, GABAAR γ2, and PPARγ. Based on these results, we postulate the existence of an obesogenic feedforward loop relying on ACBP/DBI, GABAAR, and PPARγ. Interruption of this vicious cycle, at any level, indistinguishably mitigates HFD-induced weight gain, hepatosteatosis, and hyperglycemia.

5 March 2022 in Cells
Verified
Journal Article
Open access
PDF file
YLYi Liu
Yi Liu
SLSijing Li
Sijing Li
YLYaling Liu
Yaling Liu
Cancer metastasis is one of the primary reasons for cancer-related fatalities. Despite the achievements of cancer research with microfluidic platforms, understanding the interplay of multiple factors when it comes to cancer cells is still a great challenge. Crosstalk and causality of different factors in pathogenesis are two important areas in need of further research. With the assistance of machine learning, microfluidic platforms can reach a higher level of detection and classification of cancer metastasis. This article reviews the development history of microfluidics used for cancer research and summarizes how the utilization of machine learning benefits cancer studies, particularly in biomarker detection, wherein causality analysis is useful. To optimize microfluidic platforms, researchers are encouraged to use causality analysis when detecting biomarkers, analyzing tumor microenvironments, choosing materials, and designing structures.

18 July 2025 in Frontiers in Cell and Developmental Biology
Verified
Journal Article
Open access
PDF file
SLSijing Li
Sijing Li
ZCZamri Chik
Zamri Chik
FFFarid Nazer Faruqu
Farid Nazer Faruqu
NHNajihah Mohd Hashim
Najihah Mohd Hashim
NYNor Saadah Mohd Yusof
Nor Saadah Mohd Yusof
Noraini AhmadNoraini Ahmad
Noraini Ahmad
Psoriasis is a chronic inflammatory skin disorder characterized by hyperproliferation of keratinocytes, immune dysregulation, and abnormal epidermal differentiation. Its pathogenesis involves complex interactions among keratinocytes, fibroblasts, T cells, and myeloid cells, where dynamic cytoskeletal and extracellular matrix changes critically mediate intercellular communication. Emerging evidence highlights the pivotal roles of miRNAs and exosomes in coordinating these processes: miRNAs regulate cytoskeletal organization and extracellular matrix composition, while exosomes act as intercellular messengers that deliver miRNA-mediated signals, collectively shaping cell behavior and disease progression. This review synthesizes current knowledge on how miRNA-exosome networks drive cytoskeleton-extracellular matrix crosstalk in psoriasis, emphasizing their implications for cellular communication and tissue remodeling. By elucidating these mechanisms, we identify potential therapeutic opportunities to target pathogenic signaling pathways, offering new strategies for psoriasis management.

2 March 2023 in arXiv
Verified
Preprint
Open access
PDF file
YLYang Liu
Yang Liu
YHYue-Jie Hou
Yue-Jie Hou
CQChen-Xin Qin
Chen-Xin Qin
XLXin-Hui Li
Xin-Hui Li
SLSijing Li
Sijing Li
CZChiChun Zhou
ChiChun Zhou
Detection of pulmonary nodules by CT is used for screening lung cancer in early stages.omputer aided diagnosis (CAD) based on deep-learning method can identify the suspected areas of pulmonary nodules in CT images, thus improving the accuracy and efficiency of CT diagnosis. The accuracy and robustness of deep learning models. Method:In this paper, we explore (1) the data augmentation method based on the generation model and (2) the model structure improvement method based on the embedding mechanism. Two strategies have been introduced in this study: a new data augmentation method and a embedding mechanism. In the augmentation method, a 3D pixel-level statistics algorithm is proposed to generate pulmonary nodule and by combing the faked pulmonary nodule and healthy lung, we generate new pulmonary nodule samples. The embedding mechanism are designed to better understand the meaning of pixels of the pulmonary nodule samples by introducing hidden variables. Result: The result of the 3DVNET model with the augmentation method for pulmonary nodule detection shows that the proposed data augmentation method outperforms the method based on generative adversarial network (GAN) framework, training accuracy improved by 1.5%, and with embedding mechanism for pulmonary nodules classification shows that the embedding mechanism improves the accuracy and robustness for the classification of pulmonary nodules obviously, the model training accuracy is close to 1 and the model testing F1-score is 0.90.Conclusion:he proposed data augmentation method and embedding mechanism are beneficial to improve the accuracy and robustness of the model, and can be further applied in other common diagnostic imaging tasks.