Soohyun Um

Prof. Dr. Soohyun Um

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Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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19 November 2013 in Scientific Reports
Verified
Journal Article
Open access
Soohyun UmSoohyun Um
Soohyun Um
AFAntoine Fraimout
Antoine Fraimout
Panagiotis SapountzisPanagiotis Sapountzis
Panagiotis Sapountzis
DODong-Chan Oh
Dong-Chan Oh
MPMichael Poulsen
Michael Poulsen
The ancient fungus-growing termite (Mactrotermitinae) symbiosis involves the obligate association between a lineage of higher termites and basidiomyceteTermitomycescultivar fungi. Our investigation of the fungus-growing termiteMacrotermes natalensisshows thatBacillusstrains fromM. natalensiscolonies produce a single major antibiotic, bacillaene A (1), which selectively inhibits known and putatively antagonistic fungi ofTermitomyces. Comparative analyses of the genomes of symbioticBacillusstrains revealed that they are phylogenetically closely related toBacillus subtilis, their genomes have high homology with more than 90% of ORFs being 100% identical and the sequence identities across the biosynthetic gene cluster for bacillaene are higher between termite-associated strains than to the cluster previously reported inB. subtilis. Our findings suggest that this lineage of antibiotic-producingBacillusmay be a defensive symbiont involved in the protection of the fungus-growing termite cultivar.

22 November 2013 in The Journal of Organic Chemistry
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Journal Article
Closed access
Soohyun UmSoohyun Um
Soohyun Um
TCTae Joon Choi
Tae Joon Choi
HKHeegyu Kim
Heegyu Kim
BKByung Yong Kim
Byung Yong Kim
SKSeong-Hwan Kim
Seong-Hwan Kim
DODong-Chan Oh
Dong-Chan Oh

10 May 2013 in Journal of Natural Products
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Journal Article
Closed access
Soohyun UmSoohyun Um
Soohyun Um
YKYoung-Joo Kim
Young-Joo Kim
HKHYUK NAM KWON
HYUK NAM KWON
HWHe Wen
He Wen
SKSeong-Hwan Kim
Seong-Hwan Kim
DODong-Chan Oh
Dong-Chan Oh

26 August 2015 in Journal of Medicinal Chemistry
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Journal Article
Closed access
SRSabarinathan Rangasamy
Sabarinathan Rangasamy
HJHee Ju
Hee Ju
Soohyun UmSoohyun Um
Soohyun Um
DODong-Chan Oh
Dong-Chan Oh
Joon Myong SongJoon Myong Song
Joon Myong Song

18 October 2018 in Frontiers in Chemistry
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Journal Article
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DSDaniel Shin
Daniel Shin
WBWoong Sub Byun
Woong Sub Byun
KMKyuho Moon
Kyuho Moon
YKYun Kwon
Yun Kwon
MBMunhyung Bae
Munhyung Bae
DODong-Chan Oh
Dong-Chan Oh
Microbial culture conditions in the laboratory, which conventionally involve the cultivation of one strain in one culture vessel, are vastly different from natural microbial environments. Even though perfectly mimicking natural microbial interactions is virtually impossible, the cocultivation of multiple microbial strains is a reasonable strategy to induce the production of secondary metabolites, which enables the discovery of new bioactive natural products. Our coculture of marine Streptomyces and Bacillus strains isolated together from an intertidal mudflat led to discover a new metabolite, dentigerumycin E (1). Dentigerumycin E was determined to be a new cyclic hexapeptide incorporating three piperazic acids, N-OH-Thr, N-OH-Gly, β-OH-Leu, and a pyran-bearing polyketide acyl chain mainly by analysis of its NMR and MS spectroscopic data. The putative PKS-NRPS biosynthetic gene cluster for dentigerumycin E was found in the Streptomyces strain, providing clear evidence that this cyclic peptide is produced by the Streptomyces strain. The absolute configuration of dentigerumycin E was established based on the advanced Marfey's method, ROESY NMR correlations, and analysis of the amino acid sequence of the ketoreductase domain in the biosynthetic gene cluster. In biological evaluation of dentigerumycin E (1) and its chemical derivatives [2-N,16-N-deoxydenteigerumycin E (2) and dentigerumycin methyl ester (3)], only dentigerumycin E exhibited antiproliferative and antimetastatic activities against human cancer cells, indicating that N-OH and carboxylic acid functional groups are essential for the biological activity.

16 February 2015 in Organic Letters
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Journal Article
Closed access
Soohyun UmSoohyun Um
Soohyun Um
SPSo Hyun Park
So Hyun Park
JKJihye Kim
Jihye Kim
HPHyen Joo Park
Hyen Joo Park
KKKeebeom Ko
Keebeom Ko
DODong-Chan Oh
Dong-Chan Oh