Shalini J. Rukmani

Dr. Shalini J. Rukmani

Biochemistry & Cellular and Molecular Biology, The University of Tennessee, Knoxville, Knoxville, Tennessee, USA
orcid

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
12 October 2018 in Molecular Simulation
Verified
Journal Article
Closed access
Shalini J. RukmaniShalini J. Rukmani
Shalini J. Rukmani
GKGrit Kupgan
Grit Kupgan
DADylan M. Anstine
Dylan M. Anstine
CCCoray M. Colina
Coray M. Colina
A force field (FF) analysis was performed on three water-soluble polymers (PAM, PNIPAAm, and PEO), that are of significant interest for biomedical applications, by measuring the polymer radius of gyration (Rg), solvent accessible surface area (SASA), radial distribution functions (g(r)), and relative shape anisotropy (κ2) in dilute conditions. Three generalised FFs were utilised to model PAM and PNIPAAm (DREIDING, GAFF, and GAFF2) in conjunction with five water models: SPC, SPC/E, TIP3P, TIP4P, and TIP4P/2005. It was found that the DREIDING FF showed better agreement with PAM experimental data reported for Rg, irrespective of the water model. For PNIPAAm, the DREIDING FF was also the best performing among the FFs studied; however, the choice of water model played an important role in the predicted properties. The trends in SASA and κ2 are consistent with Rg. For PEO modelled with the CHARMM C35r FF, all water models except TIP3P resulted in good agreement with experimental and previous simulation data. These results highlight the considerable impact that polymer and water FFs can have on sampling appropriate polymer conformations in solvated systems.

25 April 2022 in Soft Matter
Verified
Journal Article
Closed access
PDF file
JMJomary Mercado-Montijo
Jomary Mercado-Montijo
DADylan M. Anstine
Dylan M. Anstine
Shalini J. RukmaniShalini J. Rukmani
Shalini J. Rukmani
CCCoray M. Colina
Coray M. Colina
JAJennifer S. Andrew
Jennifer S. Andrew
A combined experimental and computational approach highlights the connection of polymer chain interactions with hydrogel structure and performance. This work provides a foundation for the design of hydrogels for applications beyond dilute conditions.

19 March 2018 in Langmuir
Verified
Journal Article
Closed access
Shalini J. RukmaniShalini J. Rukmani
Shalini J. Rukmani
TLThilanga P. Liyana-Arachchi
Thilanga P. Liyana-Arachchi
Kyle HartKyle Hart
Kyle Hart
CCCoray M. Colina
Coray M. Colina

30 December 2024 in Advanced Functional Materials
Verified
Journal Article
Closed access
SDShuvodeep De
Shuvodeep De
Shalini J. RukmaniShalini J. Rukmani
Shalini J. Rukmani
XZXianhui Zhao
Xianhui Zhao
Caitlyn M. ClarksonCaitlyn M. Clarkson
Caitlyn M. Clarkson
FVFrederic Vautard
Frederic Vautard
XHXimin He
Ximin He

30 April 2019 in The Journal of Physical Chemistry B
Verified
Journal Article
Closed access
Shalini J. RukmaniShalini J. Rukmani
Shalini J. Rukmani
PLPing Lin
Ping Lin
JAJennifer S. Andrew
Jennifer S. Andrew
CCCoray M. Colina
Coray M. Colina

4 October 2023 in Green Chemistry
Verified
Journal Article
Closed access
PDF file
YWYun-Yan Wang
Yun-Yan Wang
YWYunxuan Wang
Yunxuan Wang
LLLuna Liang
Luna Liang
MSMicholas Smith
Micholas Smith
XMXianzhi Meng
Xianzhi Meng
Arthur RagauskasArthur Ragauskas
Arthur Ragauskas
Biomass-derived solvents have been proposed as a novel pathway in biorefining for the realization of biofuels and bioproducts derived from lignocellulosic biomass.