Rice is the staple crop for more than half the world’s population, but there is a lack of high-resolution maps outlining rice areas and their growth stages. Most remote sensing studies map the rice extent; however, in tropical regions, rice is grown throughout the year with variable planting dates and cropping frequency. Thus, mapping rice growth stages is more useful than mapping only the extent. This study addressed this challenge by developing a phenology-based method. The hypothesis was that the unsupervised classification (k-means clustering) of Sentinel-1 and 2 time-series data could identify rice fields and growth stages, because (1) the presence of flooding during transplanting can be identified by Sentinel-1 VH backscatter; and (2) changes in the canopy of rice fields during growth stages (vegetative, generative, and ripening phases) up to the point of harvesting can be identified by Normalized Difference Vegetation Index (NDVI) time series. Using the proposed method, this study mapped rice field extent and cropping calendars across Peninsular Malaysia (131,598 km²) on the Google Earth Engine (GEE) platform. The Sentinel-1 and 2 monthly time series data from January 2019 to December 2020 were classified using k-means clustering to identify areas with similar phenological patterns. This approach resulted in 10-meter resolution maps of rice field extent, intensity, and cropping calendars. Validation using very high-resolution street view images from Google Earth showed that the predicted map had an overall accuracy of 95.95%, with a kappa coefficient of 0.92. In addition, the predicted crop calendars agreed well with the local government’s granary data. The results show that the proposed phenology-based method is cost-effective and can accurately map rice fields and growth stages over large areas. The information will be helpful in measuring the achievement of self-sufficiency in rice production and estimates of methane emissions from rice cultivation.

Rice tends to accumulate heavy metals present in soil that have been introduced by human activities and pass them up the food chain. The present study aimed to evaluate the accumulation of selected trace elements (Cu, Zn, and Pb) in paddy and soil and the transfer of these metals from soil to rice by analysing the bioconcentration factor (BCF), bioaccumulation factor (BAF), and translocation factor (TF) of heavy metals in paddy (Oryza sativa L.) and soil. Samples of matured paddy and the substrates were collected from three different areas located near a rural point (RP), a transportation point (TP), and an industrial point (IP). Heavy metal concentrations present in the soil and various parts of the plants were ascertained using an atomic absorption spectrophotometer (AAS). Cu, Zn, and Pb accumulation in the soil were detected in increasing orders of RP > TP > IP, IP > TP > RP, and IP > RP > TP, respectively. The BCF_shoot, BAF, and transfer factor of both Zn and Pb from soil to rice were detected in the order of TP > IP > RP, which was different from Cu, where BCF_shoot and TF showed the order of RP > IP > TP but the BAF indicated IP > RP > TP. TF > 1 was discovered for Zn and Pb at the TP, and for Cu at the RP, which could be attributed to the TP’s strongly acidic soil and Cu’s abundance in the RP’s soil. Paddy height and yield traits were the most significant at the IP site, showing the highest number of fertile spikelets, the average weight of a 1000-paddy spikelet, and the harvest index (0.56). These findings can be related to the normal range of Zn and Pb found in rice plants that support growth. Thus, the findings of this study demonstrated that soil properties and metal abundance in soil from certain land use practices can partially influence the mobility and transfer of metals through soil–plant pathways.

Soil bulk density is an important aspect of soil properties, and it can affect agroecology as in diversity, synergies, efficiency, recycling, and resilience. Diversity as in soil low in bulk density allows greater penetration of plant roots allow better access of water and nutrients. The synergistic effect of adequate supply of soil moisture content in forming moderately low soil bulk density for deeper plant roots for better access to water and nutrients. Agroecology efficiency reduces the need of external inputs to reduce environmental impact related to the resulted excessive pollution and wastage. Ultimately, an improved soil bulk density may increase the overall agroecosystem resilience and output, thus, improving the efficiency. Recycling in agroecology involved mass recycling and heat circulation as in nutrient, water, and waste reduction. A high soil bulk density will impede the recycling process the soil. Resilience as in drought resistance is for soil not too loosely packed that cannot hold water or too compacted until flooding water occurs at the surface and too little water infiltrates the soil. In addition, soil bulk density can affect the estimation of soil moisture content and temperature distribution. The ability to understand the factors that influence changes in soil bulk density would improve the predictive ability of the current model. The current study conducts a review on factors affecting the soil bulk density that is divided into soil physical, chemical, biological, environmental, and management practices. A cumulative of more than 50 factors are discussed in the review on how it affects the change in soil bulk density. The current review illustrates the conceptual relation of these factors on soil bulk density. Also, the result of the current work can be used to support future endeavour by turning the conceptual relation into quantifiable predictive model.