Thomas Exner

Dr. Thomas Exner

Edelweiss Connect GmbH
orcid

Research Focus & Metrics

Academic Career Length

25Years (2002-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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19 September 2007 in Swarm Intelligence
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Journal Article
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OKOliver Korb
Oliver Korb
TSThomas Stützle
Thomas Stützle
TEThomas Exner
Thomas Exner

30 September 2010 in Journal of Computer-Aided Molecular Design
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Journal Article
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TBTim Ten Brink
Tim Ten Brink
TEThomas Exner
Thomas Exner

28 June 2013 in ACS Chemical Biology
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Journal Article
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DHDirk Hauck
Dirk Hauck
IJInes Joachim
Ines Joachim
BFBenjamin Frommeyer
Benjamin Frommeyer
AVAnnabelle Varrot
Annabelle Varrot
BPBodo Philipp
Bodo Philipp
ATAlexander Titz
Alexander Titz

30 March 2012 in Journal of Chemical Theory and Computation
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Journal Article
Closed access
AFAndrea Frank
Andrea Frank
HMHeiko M. Möller
Heiko M. Möller
TEThomas Exner
Thomas Exner

15 October 2020 in Nanomaterials
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Journal Article
Open access
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APAnastasios Papadiamantis
Anastasios Papadiamantis
FKFrederick C. Klaessig
Frederick C. Klaessig
TEThomas Exner
Thomas Exner
SHSabine Hofer
Sabine Hofer
NHNorbert Hofstaetter
Norbert Hofstaetter
Iseult LynchIseult Lynch
Iseult Lynch
The emergence of nanoinformatics as a key component of nanotechnology and nanosafety assessment for the prediction of engineered nanomaterials (NMs) properties, interactions, and hazards, and for grouping and read-across to reduce reliance on animal testing, has put the spotlight firmly on the need for access to high-quality, curated datasets. To date, the focus has been around what constitutes data quality and completeness, on the development of minimum reporting standards, and on the FAIR (findable, accessible, interoperable, and reusable) data principles. However, moving from the theoretical realm to practical implementation requires human intervention, which will be facilitated by the definition of clear roles and responsibilities across the complete data lifecycle and a deeper appreciation of what metadata is, and how to capture and index it. Here, we demonstrate, using specific worked case studies, how to organise the nano-community efforts to define metadata schemas, by organising the data management cycle as a joint effort of all players (data creators, analysts, curators, managers, and customers) supervised by the newly defined role of data shepherd. We propose that once researchers understand their tasks and responsibilities, they will naturally apply the available tools. Two case studies are presented (modelling of particle agglomeration for dose metrics, and consensus for NM dissolution), along with a survey of the currently implemented metadata schema in existing nanosafety databases. We conclude by offering recommendations on the steps forward and the needed workflows for metadata capture to ensure FAIR nanosafety data.

11 December 2020 in Nanomaterials
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Iseult LynchIseult Lynch
Iseult Lynch
Antreas AfantitisAntreas Afantitis
Antreas Afantitis
TEThomas Exner
Thomas Exner
MHMartin Himly
Martin Himly
VLVladimir Lobaskin
Vladimir Lobaskin
GMGeorgia Melagraki
Georgia Melagraki
Chemoinformatics has developed efficient ways of representing chemical structures for small molecules as simple text strings, simplified molecular-input line-entry system (SMILES) and the IUPAC International Chemical Identifier (InChI), which are machine-readable. In particular, InChIs have been extended to encode formalized representations of mixtures and reactions, and work is ongoing to represent polymers and other macromolecules in this way. The next frontier is encoding the multi-component structures of nanomaterials (NMs) in a machine-readable format to enable linking of datasets for nanoinformatics and regulatory applications. A workshop organized by the H2020 research infrastructure NanoCommons and the nanoinformatics project NanoSolveIT analyzed issues involved in developing an InChI for NMs (NInChI). The layers needed to capture NM structures include but are not limited to: core composition (possibly multi-layered); surface topography; surface coatings or functionalization; doping with other chemicals; and representation of impurities. NM distributions (size, shape, composition, surface properties, etc.), types of chemical linkages connecting surface functionalization and coating molecules to the core, and various crystallographic forms exhibited by NMs also need to be considered. Six case studies were conducted to elucidate requirements for unambiguous description of NMs. The suggested NInChI layers are intended to stimulate further analysis that will lead to the first version of a “nano” extension to the InChI standard.