Timothy Josepch O'Donnell

Mr. Timothy Josepch O'Donnell

University of Hawaiʻi at Mānoa, Honolulu, Hawaii, USA
orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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14 May 2021 in PLOS Pathogens
Verified
Journal Article
Open access
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ADAllexa Dow
Allexa Dow
PSPreeti Sule
Preeti Sule
TOTimothy Josepch O'Donnell
Timothy Josepch O'Donnell
ABAndrew Burger
Andrew Burger
JMJoshua T. Mattila
Joshua T. Mattila
SPSladjana Prisic
Sladjana Prisic
Mycobacterium tuberculosis (Mtb) has complex and dynamic interactions with the human host, and subpopulations of Mtb that emerge during infection can influence disease outcomes. This study implicates zinc ion (Zn2+) availability as a likely driver of bacterial phenotypic heterogeneity in vivo. Zn2+ sequestration is part of “nutritional immunity”, where the immune system limits micronutrients to control pathogen growth, but this defense mechanism seems to be ineffective in controlling Mtb infection. Nonetheless, Zn2+-limitation is an environmental cue sensed by Mtb, as calprotectin triggers the zinc uptake regulator (Zur) regulon response in vitro and co-localizes with Zn2+-limited Mtb in vivo. Prolonged Zn2+ limitation leads to numerous physiological changes in vitro, including differential expression of certain antigens, alterations in lipid metabolism and distinct cell surface morphology. Furthermore, Mtb enduring limited Zn2+ employ defensive measures to fight oxidative stress, by increasing expression of proteins involved in DNA repair and antioxidant activity, including well described virulence factors KatG and AhpC, along with altered utilization of redox cofactors. Here, we propose a model in which prolonged Zn2+ limitation defines a population of Mtb with anticipatory adaptations against impending immune attack, based on the evidence that Zn2+-limited Mtb are more resistant to oxidative stress and exhibit increased survival and induce more severe pulmonary granulomas in mice. Considering that extracellular Mtb may transit through the Zn2+-limited caseum before infecting naïve immune cells or upon host-to-host transmission, the resulting phenotypic heterogeneity driven by varied Zn2+ availability likely plays a key role during early interactions with host cells.

8 June 2021 in New Journal of Chemistry
Verified
Journal Article
Closed access
PDF file
TOTimothy Josepch O'Donnell
Timothy Josepch O'Donnell
JGJoshua R. Gurr
Joshua R. Gurr
JDJingqiu Dai
Jingqiu Dai
MTMasahiko Taniguchi
Masahiko Taniguchi
Philip WilliamsPhilip Williams
Philip Williams
JLJonathan Lindsey
Jonathan Lindsey
The ‘pigments of life’ family has been enlarged by the discovery of the tetrapyrrole macrocycles dubbed tolyporphins, which are present in a cyanobacterial culture (HT-58-2). Of the 18 known tolyporphins, fourteen (A–J and L–O) are dioxobacteriochlorins, three (K, Q and R) are oxochlorins, and one (P) is a porphyrin. The members with a given chromophore absorb similarly but not identically with each other, presenting the problem of absorption spectral aliasing. Tolyporphins G and H are isomers, as are tolyporphins L–O, given the nature of the peripheral (C-glycoside, –OH, or –OAc) substituents, presenting the (isobaric) problem of mass spectrometric analysis. The distribution of tolyporphin members is known to change over time and under different growth conditions, yet the complexity of the tolyporphins mixture presents challenges toward characterization of the underlying factors that alter such distributions. Liquid chromatography-mass spectrometry with dynamic multiple reaction monitoring (LC-MS-dMRM) was employed to characterize the distribution of tolyporphins under distinct growth media, using two semisynthetic standards, tolyporphin A O,O-dibutyrate and tolyporphin D O,O,O,O-tetrabutyrate. Growth in media containing both ammonium and nitrate salts versus nitrate alone affords increased production of tolyporphins. The absorption spectra of tolyporphins A–R have been reevaluated with regards to molar absorption coefficients, are compared with those of selected tetrapyrrole macrocycles to better understand the effects of chromophores and substituents, and are made available here in print and digital forms for comparison with isolated tolyporphins and mixtures thereof. Together, the work provides the foundation for quantitative assessment of these unusual natural products.

9 December 2019 in The Journal of Organic Chemistry
Verified
Journal Article
Closed access
JGJoshua R. Gurr
Joshua R. Gurr
JDJingqiu Dai
Jingqiu Dai
CPCasey S. Philbin
Casey S. Philbin
HSHope T. Sartain
Hope T. Sartain
TOTimothy Josepch O'Donnell
Timothy Josepch O'Donnell
Philip WilliamsPhilip Williams
Philip Williams

19 May 2022 in Molecules
Verified
Journal Article
Open access
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FLFeifei Liu
Feifei Liu
SMSudipta Mallick
Sudipta Mallick
TOTimothy Josepch O'Donnell
Timothy Josepch O'Donnell
RRRuxianguli Rouzimaimaiti
Ruxianguli Rouzimaimaiti
YLYuheng Luo
Yuheng Luo
LCLeng Chee Chang
Leng Chee Chang
Seven new coumarinolignans, walthindicins A–F (1a, 1b, 2–5, 7), along with five known analogs (6, 8–11), were isolated from the roots of Waltheria indica. The structures of the new compounds are determined by detailed nuclear magnetic resonance (NMR), circular dichroism (CD) with extensive computational support, and mass spectroscopic data interpretation. Compounds were tested for their antioxidant activity in Human Cervical Cancer cells (HeLa cells). Compounds 1a and 6 showed higher reactive oxygen species (ROS) inhibitory activity at 20 μg/mL when compared with other natural compound-based antioxidants such as ascorbic acid. Considering the role of ROS in nuclear-factor kappa B (NF-κB) activation, compounds 1a and 6 were evaluated for NF-κB inhibitory activity and showed a concentration-dependent inhibition in Human Embryonic Kidney 293 cells (Luc-HEK-293).

17 December 2020 in Dalton Transactions
Verified
Journal Article
Closed access
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DZDaniel Y. Zhou
Daniel Y. Zhou
PMPreston M. Miura-Akagi
Preston M. Miura-Akagi
SMSierra M. McCarty
Sierra M. McCarty
CGCeleste H. Guiles
Celeste H. Guiles
TOTimothy Josepch O'Donnell
Timothy Josepch O'Donnell
MCMatthew F. Cain
Matthew F. Cain
Exposure of 10π-electron benzazaphosphole 1 to HCl, followed by nucleophilic substitution with the Grignard reagent BrMgCCPh afforded alkynyl functionalized 3 featuring an exocyclic –CC–Ph group with an elongated P–C bond (1.7932(19) Å). Stoichiometric experiments revealed that treatment of trans-Pd(PEt3)2(Ar)(I) (Ar = p-Me (C) or p-F (D)) with 3 generated trans-Pd(PEt3)2(Ar)(CCPh) (Ar = p-Me (E) or p-F (F)), 5, which is the result of ligand exchange between P–I byproduct 4 and C/D, and the reductively eliminated product (Ar–CC–Ph). Cyclic voltammetry studies showed and independent investigations confirmed 4 is also susceptible to redox processes including bimetallic oxidative addition to Pd(0) to give Pd(I) dimer 6-Pd2-(P(t-Bu)3)2 and reduction to diphosphine 7. During catalysis, we hypothesized that this unwanted reactivity could be circumvented by employing a source of fluoride as an additive. This was demonstrated by conducting a Sonogashira-type reaction between 1-iodotoluene and 3 in the presence of 10 mol% Na2PdCl4, 20 mol% P(t-Bu)Cy2, and 5 equiv. of tetramethylammonium fluoride (TMAF), resulting in turnover and the isolation of Ph–CC–(o-Tol) as the major product.

20 June 2023 in ChemRxiv
Verified
Preprint
Open access
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DBDaniel Back
Daniel Back
TOTimothy Josepch O'Donnell
Timothy Josepch O'Donnell
KAKyle Axt
Kyle Axt
JGJoshua Gurr
Joshua Gurr
JVJuan Vanegas
Juan Vanegas
BPBenjamin Philmus
Benjamin Philmus
Cyanobacteria are tremendous producers of biologically active natural products including the potent anti-inflammatory compound tolypodiol. However, linking biosynthetic gene clusters with compound production in cyanobacteria has lagged behind other bacterial genera. Tolypodiol is a meroterpenoid originally isolated from the cyanobacterium HT-58-2. Here we describe the identification of the tolypodiol biosynthetic gene cluster through heterologous expression in Anabaena, and in vitro protein assays of a methyltransferase found in the tolypodiol biosynthetic gene cluster. We have also identified similar biosynthetic gene clusters in cyanobacterial and actinobacterial genomes suggesting that meroterpenoids with structural similarity to the tolypodiols may be synthesized by other microbes. We also report the identification of two new analogs of tolypodiol that we have identified in both the original and heterologous producer. This work further illustrates the usefulness of Anabaena as a heterologous expression host for cyanobacterial compounds and how integrated approaches can help link natural product compounds with their producing biosynthetic gene clusters.