Trung V. Phan

Dr. Trung V. Phan

Johns Hopkins University, Baltimore, Maryland, USA
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Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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12 March 2021 in Physical Review Letters
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Journal Article
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GWGao Wang
Gao Wang
Trung V. PhanTrung V. Phan
Trung V. Phan
SLShengkai Li
Shengkai Li
MWMichael Wombacher
Michael Wombacher
Junle QuJunle Qu
Junle Qu
LLLiyu Liu
Liyu Liu
We present an ecology-inspired form of active matter consisting of a robot swarm. Each robot moves over a planar dynamic resource environment represented by a large light-emitting diode array in search of maximum light intensity; the robots deplete (dim) locally by their presence the local light intensity and seek maximum light intensity. Their movement is directed along the steepest local light intensity gradient; we call this emergent symmetry breaking motion “field drive.” We show there emerge dynamic and spatial transitions similar to gas, crystalline, liquid, glass, and jammed states as a function of robot density, resource consumption rates, and resource recovery rates. Paradoxically the nongas states emerge from smooth, flat resource landscapes, not rough ones, and each state can directly move to a glassy state if the resource recovery rate is slow enough, at any robot density.

21 November 2022 in Physical Review Letters
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Journal Article
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SRSunghan Ro
Sunghan Ro
BGBuming Guo
Buming Guo
ASAaron Shih
Aaron Shih
Trung V. PhanTrung V. Phan
Trung V. Phan
RARobert H. Austin
Robert H. Austin
SMStefano Martiniani
Stefano Martiniani
Time-reversal symmetry breaking and entropy production are universal features of nonequilibrium phenomena. Despite its importance in the physics of active and living systems, the entropy production of systems with many degrees of freedom has remained of little practical significance because the high dimensionality of their state space makes it difficult to measure. Here we introduce a local measure of entropy production and a numerical protocol to estimate it. We establish a connection between the entropy production and extractability of work in a given region of the system and show how this quantity depends crucially on the degrees of freedom being tracked. We validate our approach in theory, simulation, and experiments by considering systems of active Brownian particles undergoing motility-induced phase separation, as well as active Brownian particles and E.coli in a rectifying device in which the time-reversal asymmetry of the particle dynamics couples to spatial asymmetry to reveal its effects on a macroscopic scale.

22 July 2020 in Physical Review X
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Trung V. PhanTrung V. Phan
Trung V. Phan
RMRyan Morris
Ryan Morris
MBMatthew E. Black
Matthew E. Black
TDTuan K. Do
Tuan K. Do
KLKe-Chih Lin
Ke-Chih Lin
RARobert H. Austin
Robert H. Austin
Bacteria which grow not on the featureless agar plates of the microbiology lab but in the real world must navigate topologies which are nontrivially complex, such as mazes or fractals. We show that chemosensitive motile E. coli can efficiently explore nontrivial mazes in times much shorter than a no-memory (Markovian) walk would predict, and can collectively escape from a fractal topology. The strategies used by the bacteria include individual power-law probability distribution function exploration, the launching of chemotactic collective waves with preferential branching at maze nodes and defeating of fractal pumping, and bet hedging in case the more risky attempts to find food fail.

29 January 2021 in Symmetry
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Trung V. PhanTrung V. Phan
Trung V. Phan
GWGao Wang
Gao Wang
LLLiyu Liu
Liyu Liu
RARobert Austin
Robert Austin
We theoretically show that isolated agents that locally and symmetrically consume resources and sense positive resource gradients can generate constant motion via bootstrapped resource gradients in the absence of any externally imposed gradients, and we show a realization of this motion using robots. This self-generated agent motion can be coupled with neighboring agents to act as a spontaneously broken symmetry seed for emergent collective dynamics. We also show that in a sufficiently weak externally imposed gradient, it is possible for an agent to move against an external resource gradient due to the local resource depression on the landscape created by an agent. This counter-intuitive boot-strapped motion against an external gradient is demonstrated with a simple robot system on an light-emitting diode (LED) light-board.

28 October 2021 in Journal of Biological Physics
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Trung V. PhanTrung V. Phan
Trung V. Phan
GWGao Wang
Gao Wang
TDTuan K. Do
Tuan K. Do
IKIoannis G. Kevrekidis
Ioannis G. Kevrekidis
SASarah Amend
Sarah Amend
RARobert H. Austin
Robert H. Austin

31 October 2023 in Quantum Reports
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Journal Article
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AVAo Duong Vi
Ao Duong Vi
DTDuy V. Tran
Duy V. Tran
TPTrung Kien Pham
Trung Kien Pham
DNDuc M. Nguyen
Duc M. Nguyen
HTHuy D. Tran
Huy D. Tran
Trung V. PhanTrung V. Phan
Trung V. Phan
We establish an analogy between the Fokker–Planck equation describing evolutionary landscape dynamics and the Schrödinger equation which characterizes quantum mechanical particles, showing that a population with multiple genetic traits evolves analogously to a wavefunction under a multi-dimensional energy potential in imaginary time. Furthermore, we discover within this analogy that the stationary population distribution on the landscape corresponds exactly to the ground-state wavefunction. This mathematical equivalence grants entry to a wide range of analytical tools developed by the quantum mechanics community, such as the Rayleigh–Ritz variational method and the Rayleigh–Schrödinger perturbation theory, allowing us not only the conduct of reasonable quantitative assessments but also exploration of fundamental biological inquiries. We demonstrate the effectiveness of these tools by estimating the population success on landscapes where precise answers are elusive, and unveiling the ecological consequences of stress-induced mutagenesis—a prevalent evolutionary mechanism in pathogenic and neoplastic systems. We show that, even in an unchanging environment, a sharp mutational burst resulting from stress can always be advantageous, while a gradual increase only enhances population size when the number of relevant evolving traits is limited. Our interdisciplinary approach offers novel insights, opening up new avenues for deeper understanding and predictive capability regarding the complex dynamics of evolving populations.