Umarqayum AbuBakar

Mr. Umarqayum AbuBakar

Institute of Biological Sciences, Universiti Malaya, Kuala Lumpur, Malaysia
orcid
A PhD candidate in Virology. My research focuses on influenz...

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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24 March 2023 in Viruses
Verified
Journal Article
Open access
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Umarqayum AbuBakarUmarqayum AbuBakar
Umarqayum AbuBakar
Lina AmraniLina Amrani
Lina Amrani
FKFarah Ayuni Kamarulzaman
Farah Ayuni Kamarulzaman
SKSaiful Anuar Karsani
Saiful Anuar Karsani
Pouya HassandarvishPouya Hassandarvish
Pouya Hassandarvish
JKJasmine Elanie Khairat
Jasmine Elanie Khairat
An influenza pandemic happens when a novel influenza A virus is able to infect and transmit efficiently to a new, distinct host species. Although the exact timing of pandemics is uncertain, it is known that both viral and host factors play a role in their emergence. Species-specific interactions between the virus and the host cell determine the virus tropism, including binding and entering cells, replicating the viral RNA genome within the host cell nucleus, assembling, maturing and releasing the virus to neighboring cells, tissues or organs before transmitting it between individuals. The influenza A virus has a vast and antigenically varied reservoir. In wild aquatic birds, the infection is typically asymptomatic. Avian influenza virus (AIV) can cross into new species, and occasionally it can acquire the ability to transmit from human to human. A pandemic might occur if a new influenza virus acquires enough adaptive mutations to maintain transmission between people. This review highlights the key determinants AIV must achieve to initiate a human pandemic and describes how AIV mutates to establish tropism and stable human adaptation. Understanding the tropism of AIV may be crucial in preventing virus transmission in humans and may help the design of vaccines, antivirals and therapeutic agents against the virus.

6 February 2023 in Preprints.org
Verified
Preprint
Open access
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Umarqayum AbuBakarUmarqayum AbuBakar
Umarqayum AbuBakar
Lina AmraniLina Amrani
Lina Amrani
FKFarah Kamarulzaman
Farah Kamarulzaman
SKSaiful Anuar Karsani
Saiful Anuar Karsani
Pouya HassandarvishPouya Hassandarvish
Pouya Hassandarvish
JKJasmine Elanie Khairat
Jasmine Elanie Khairat
A pandemic happens when a novel influenza A virus is able to infect and transmit efficiently to a new, distinct host species. Although the exact timing of pandemics is uncertain, it is known that both viral and host factors play a role in their emergence. Species-specific interactions between the virus and the host cell determine the virus tropism. These include binding and entering cells, replicating the viral RNA genome within the host cell nucleus, assembling, maturing, and releasing the virus to neighbouring cells, tissues, or organs before transmitting it between individuals. Influenza has a vast and antigenically varied reservoir. In wild aquatic birds, the infection is typically asymptomatic. Avian influenza virus (AIV) can cross into new species, and occasionally, it can acquire the ability to transmit from human to human. A pandemic might occur if a new influenza virus acquires enough adaptive mutations to maintain transmission between people. This review highlights the key determinants AIV must achieve to initiate a human pandemic and describes how AIV mutates to establish tropism and stable human adaptation. Understanding the tropism of AIV may be crucial in preventing virus transmission in humans and may help design vaccines, antivirals and therapeutic agents against the virus.

28 March 2020 in Processes
Verified
Journal Article
Open access
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Umarqayum AbuBakarUmarqayum AbuBakar
Umarqayum AbuBakar
PSPuvaratnesh Subramaniam
Puvaratnesh Subramaniam
NBNurul Ain Kamar Bashah
Nurul Ain Kamar Bashah
AKAmira Kamalrudin
Amira Kamalrudin
KKKhaidatul Akmar Kamaruzaman
Khaidatul Akmar Kamaruzaman
MNMahanem Mat Noor
Mahanem Mat Noor
Diabetes mellitus is shown to bring negative effects on male reproductive health due to long-term effects of insulin deficiency or resistance and increased oxidative stress. Ficus carica (FC), an herbal plant, known to have high antioxidant activity and antidiabetic properties, has been used traditionally to treat diabetes. The objective of this study is to determine the potential of the FC leaf extract in improving sperm quality of streptozotocin (STZ) induced diabetic male rats from proteomics perspective. A total of 20 male rats were divided into four groups; normal (nondiabetic rats), negative control (diabetic rats without treatment), positive control (diabetic rats treated with 300 mg/kg metformin), and FC group (diabetic rats treated with 400 mg/kg FC extract). The treatments were given via oral gavage for 21 consecutive days. The fasting blood glucose (FBG) level of FC treated group demonstrated a significant (p < 0.05) decrease compared to negative group after 21 days of treatment, as well as a significant (p < 0.05) increase in the sperm quality parameters compared to negative group. Sperm proteomics analysis on FC treated group also exhibited the increase of total protein expression especially the proteins related to fertility compared to negative group. In conclusion, this study clearly justified that FC extract has good potential as antihyperglycemic and profertility agent that may be beneficial for male diabetic patients who have fertility problems.

18 October 2022 in Journal of Applied Animal Research
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Journal Article
Open access
SJSiti Aishah Johan
Siti Aishah Johan
Umarqayum AbuBakarUmarqayum AbuBakar
Umarqayum AbuBakar
FTFarah Shafawati Mohd Taib
Farah Shafawati Mohd Taib
JKJasmine Elanie Khairat
Jasmine Elanie Khairat
The house crow (Corvus splendens) is globally recognised as a pest. It is an invasive species that can populate Malaysia's urban landscape and urban coastal areas. C. splendens was imported from Sri Lanka to Klang, Malaysia, in the 1890s to control caterpillars on coffee plantations. After a few decades, crows are able to adapt and co-exist with humans as a result of significant growth in the human population and urbanization. These urban pests are important due to the large volume of faecal droppings on buildings and near human dwellings. In other parts of the world, house crows can transmit pathogens and diseases such as chlamydiosis, salmonellosis, colibacillosis, and avian tuberculosis. They also carry human pathogens such as Salmonella spp., Shigella serotypes, Vibrionaceae spp., Newcastle disease virus (NDV), avian influenza virus (AIV) and West Nile virus (WNV) that can be transmitted to humans through their faeces. The first AIV transmission from birds to humans that caused a pandemic was alarming because of the risk of AIV and other avian virus transmission from birds. This prompted investigations into crow populations in urban centres. This review details the potential of C. splendens to spread AIV, NDV and WNV in Malaysia's highly urbanized areas.

17 May 2025 in Scientific Reports
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Journal Article
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Umarqayum AbuBakarUmarqayum AbuBakar
Umarqayum AbuBakar
ZLZhao Xuan Low
Zhao Xuan Low
MAMuhammad Zhafran Mohd Aris
Muhammad Zhafran Mohd Aris
RLRafidah Lani
Rafidah Lani
SASyafiq Asnawi Zainal Abidin
Syafiq Asnawi Zainal Abidin
JKJasmine Elanie Khairat
Jasmine Elanie Khairat
Influenza poses a global health threat. With drug-resistant strains emerging, there is an urgent need for effective antiviral drugs. This study explores antiviral potential of flavonoids against influenza A virus (IAV) and their mechanism of action. By utilizing in silico docking as a screening approach, diosmin, orientin, and fisetin were identified as flavonoids with the strongest interactions with viral proteins. Out of them, diosmin was found to effectively inhibit IAV replication in vitro, particularly at the attachment and post-entry stages, with significant inhibition observed at 0-h post-infection (hpi) and 2 hpi, while also demonstrated prophylactic activity, peaking at − 2 hpi. Following that, diosmin significantly increases the expression of antiviral genes, which may relate to the discovery of its prophylactic activity. Proteomics analysis showed that diosmin treatment during the post-entry stage of IAV replication reduced viral protein levels, confirming its antiviral activity at this point. Additionally, diosmin also modulated host proteins related to innate immunity, inducing type I interferon and anti-inflammatory responses during the infection. These findings provide preliminary evidence of diosmin’s antiviral and prophylactic activity against IAV, paving the way for further research on its mechanism of action.

26 January 2024 in Asian Pacific Journal of Reproduction
Verified
Journal Article
Open access
MNMahanem Mat Noor
Mahanem Mat Noor
SPSubramaniam Puvaratnesh
Subramaniam Puvaratnesh
Umarqayum AbuBakarUmarqayum AbuBakar
Umarqayum AbuBakar
SNShamsusah A Nadia
Shamsusah A Nadia
Objective: To explore the impact of Ficus carica fruit aqueous extract on fertility parameters in streptozotocin (STZ)-induced male rats. Methods: Twenty-four male Sprague-Dawley rats were divided into four different groups. All groups except a normal control group were induced with 50 mg/kg of streptozotocin (STZ) intravenously to induce diabetes. A positive control group was treated with an antidiabetic drug, metformin (500 mg/kg) whereas a negative control group remained untreated throughout the experiment. Meanwhile, another diabetic rat group received treatment with 400 mg/kg of aqueous Ficus carica fruit extract. Rats in the treatment group were administered Ficus carica fruit aqueous extract daily through force-feeding via oral gavage for a 21-day period. Assessments included the sperm quality (count, motility and morphology), histology of the testes, serum testosterone and fasting blood glucose (FBG) level. Results: The FBG level of the Ficus carica-treated rats exhibited a significant decrease compared to the negative control group (P<0.05). Sperm quality analysis also indicated that the aqueous Ficus carica extract had significant positive effects on sperm count and motility (P<0.05). The histology of the testes in Ficus carica- treated rats revealed an improved cell arrangement in the germinal cell layer. Furthermore, serum testosterone level showed an increment in the Ficus carica treatment group in comparison to the negative control group. Conclusions: Our findings provide compelling evidence for the pro-fertility and anti-hyperglycemic properties of aqueous Ficus carica fruit extract in diabetic-induced male rats.