Xinyi Shen

Ms. Xinyi Shen

Yale School of Public Health
orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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23 October 2022 in Biology of Sex Differences
Verified
Journal Article
Open access
PDF file
YCYuping Cai
Yuping Cai
XSXinyi Shen
Xinyi Shen
LLLingeng Lu
Lingeng Lu
HYHong Yan
Hong Yan
HHHuang Huang
Huang Huang
Caroline JohnsonCaroline Johnson
Caroline Johnson
Background: Bile acids are known to be genotoxic and contribute to colorectal cancer (CRC). However, the link between CRC tumor bile acids to tumor location, patient sex, microbiome, immune-regulatory cells, and prognosis is not clear. Methods: We conducted bile acid analysis using targeted liquid chromatography–mass spectrometry (LC–MS) on tumor tissues from CRC patients (n = 228) with survival analysis. We performed quantitative immunofluorescence (QIF) on tumors to examine immune cells. Results: Twelve of the bile acids were significantly higher in right-sided colon tumors compared to left-sided colon tumors. Furthermore, in male patients, right-sided colon tumors had elevated secondary bile acids (deoxycholic acid, lithocholic acid, ursodeoxycholic acid) compared to left-sided colon tumors, but this difference between tumors by location was not observed in females. A high ratio of glycoursodeoxycholic to ursodeoxycholic was associated with 5-year overall survival (HR = 3.76, 95% CI = 1.17 to 12.1, P = 0.026), and a high ratio of glycochenodeoxycholic acid to chenodeoxycholic acid was associated with 5-year recurrence-free survival (HR = 3.61, 95% CI = 1.10 to 11.84, P = 0.034). We also show correlation between these bile acids and FoxP3 + T regulatory cells. Conclusions: This study revealed that the distribution of bile acid abundances in colon cancer patients is tumor location-, age- and sex-specific, and are linked to patient prognosis. This study provides new implications for targeting bile acid metabolism, microbiome, and immune responses for colon cancer patients by taking into account primary tumor location and sex.

9 February 2022 in Metabolites
Verified
Journal Article
Open access
PDF file
XSXinyi Shen
Xinyi Shen
YCYuping Cai
Yuping Cai
LLLingeng Lu
Lingeng Lu
HHHuang Huang
Huang Huang
HYHong Yan
Hong Yan
SKSajid A Khan
Sajid A Khan
The interplay between the sex-specific differences in tumor metabolome and colorectal cancer (CRC) prognosis has never been studied and represents an opportunity to improve patient outcomes. This study examines the link between tumor metabolome and prognosis by sex for CRC patients. Using untargeted metabolomics analysis, abundances of 91 metabolites were obtained from primary tumor tissues from 197 patients (N = 95 females, N = 102 males) after surgical colectomy for stage I-III CRC. Cox Proportional hazard (PH) regression models estimated the associations between tumor metabolome and 5-year overall survival (OS) and recurrence-free survival (RFS), and their interactions with sex. Eleven metabolites had significant sex differences in their associations with 5-year OS, and five metabolites for 5-year RFS. The metabolites asparagine and serine had sex interactions for both OS and RFS. Furthermore, in the asparagine synthetase (ASNS)-catalyzed asparagine synthesis pathway, asparagine was associated with substantially poorer OS (HR (95% CI): 6.39 (1.78–22.91)) and RFS (HR (95% CI): 4.36 (1.39–13.68)) for female patients only. Similar prognostic disadvantages in females were seen in lysophospholipid and polyamine synthesis. Unique metabolite profiles indicated that increased asparagine synthesis was associated with poorer prognosis for females only, providing insight into precision medicine for CRC treatment stratified by sex.

19 January 2022 in Environmental Research
Verified
Journal Article
Closed access
XWXuzhi Wan
Xuzhi Wan
WJWei Jia
Wei Jia
PZPan Zhuang
Pan Zhuang
FWFei Wu
Fei Wu
YZYiju Zhang
Yiju Zhang
YZYu Zhang
Yu Zhang

1 April 2022 in Journal of the Academy of Nutrition and Dietetics
Verified
Journal Article
Closed access
FWFei Wu
Fei Wu
PZPan Zhuang
Pan Zhuang
CZChuchu Zhan
Chuchu Zhan
XSXinyi Shen
Xinyi Shen
JJJingjing Jiao
Jingjing Jiao
YZYu Zhang
Yu Zhang

1 March 2023 in Cancer Discovery
Verified
Journal Article
Closed access
PDF file
XSXinyi Shen
Xinyi Shen
ADAndrew T. DeWan
Andrew T. DeWan
Caroline JohnsonCaroline Johnson
Caroline Johnson
Summary: In this issue of Cancer Discovery, Holowatyj and colleagues uncover racial/ethnic and sex heterogeneity in somatic mutations among patients with early-onset colorectal cancer. The findings shed light on a deeper understanding of complex biological and genetic mechanisms for colorectal cancer in diverse populations. See related article by Holowatyj et al., p. 570 (6).