Roman Bykov

Dr. Roman Bykov

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Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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26 February 2019 in BMC Ecology and Evolution
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RBRoman Bykov
Roman Bykov
MYMaria A. Yudina
Maria A. Yudina
NGNataly E. Gruntenko
Nataly E. Gruntenko
IZIlya K. Zakharov
Ilya K. Zakharov
MVMarina A. Voloshina
Marina A. Voloshina
Yury IlinskyYury Ilinsky
Yury Ilinsky
Maternally inherited Wolbachia symbionts infect D. melanogaster populations worldwide. Infection rates vary greatly. Genetic diversity of Wolbachia in D. melanogaster can be subdivided into several closely related genotypes coinherited with certain mtDNA lineages. mtDNA haplotypes have the following global distribution pattern: mtDNA clade I is mostly found in North America, II and IV in Africa, III in Europe and Africa, V in Eurasia, VI is global but very rare, and VIII is found in Asia. The wMel Wolbachia genotype is predominant in D. melanogaster populations. However, according to the hypothesis of global Wolbachia replacement, the wMelCS genotype was predominant before the XX century when it was replaced by the wMel genotype. Here we analyse over 1500 fly isolates from the Palearctic region to evaluate the prevalence, genetic diversity and distribution pattrern of the Wolbachia symbiont, occurrence of mtDNA variants, and finally to discuss the Wolbachia genotype global replacement hypothesis. All studied Palearctic populations of D. melanogaster were infected with Wolbachia at a rate of 33–100%. We did not observe any significant correlation between infection rate and longitude or latitude. Five previously reported Wolbachia genotypes were found in Palearctic populations with a predominance of the wMel variant. The mtDNA haplotypes of the I_II_III clade and V clade were prevalent in Palearctic populations. To test the recent Wolbachia genotype replacement hypothesis, we examined three genomic regions of CS-like genotypes. Low genetic diversity was observed, only two haplotypes of the CS genotypes with a ‘CCG’ variant predominance were found. The results of our survey of Wolbachia infection prevalence and genotype diversity in Palearctic D. melanogaster populations confirm previous studies. Wolbachia is ubiquitous in the Palearctic region. The wMel genotype is dominant with local occurrence of rare genotypes. Together with variants of the V mtDNA clade, the variants of the ‘III+’ clade are dominant in both infected and uninfected flies of Palearctic populations. Based on our data on Wolbachia and mtDNA in different years in some Palearctic localities, we can conclude that flies that survive the winter make the predominant symbiont contribution to the subsequent generation. A comprehensive overview of mtDNA and Wolbachia infection of D. melanogaster populations worldwide does not support the recent global Wolbachia genotype replacement hypothesis. However, we cannot exclude wMelCS genotype rate fluctuations in the past.

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Yury IlinskyYury Ilinsky
Yury Ilinsky
MDMary Demenkova
Mary Demenkova
RBRoman Bykov
Roman Bykov
ABAlexander Bugrov
Alexander Bugrov
Bacteria of the Wolbachia genus are maternally inherited symbionts of Nematoda and numerous Arthropoda hosts. There are approximately 20 lineages of Wolbachia, which are called supergroups, and they are designated alphabetically. Wolbachia strains of the supergroups A and B are predominant in arthropods, especially in insects, and supergroup F seems to rank third. Host taxa have been studied very unevenly for Wolbachia symbionts, and here, we turn to one of largely unexplored insect families: Acrididae. On the basis of five genes subject to multilocus sequence typing, we investigated the incidence and genetic diversity of Wolbachia in 41 species belonging three subfamilies (Gomphocerinae, Oedipodinae, and Podisminae) collected in Turkey, Kazakhstan, Tajikistan, Russia, and Japan, making 501 specimens in total. Our results revealed a high incidence and very narrow genetic diversity of Wolbachia. Although only the strains belonging to supergroups A and B are commonly present in present, the Acrididae hosts here proved to be infected with supergroups B and F without A-supergroup variants. The only trace of an A-supergroup lineage was noted in one case of an inter-supergroup recombinant haplotype, where the ftsZ gene came from supergroup A, and the others from supergroup B. Variation in the Wolbachia haplotypes in Acrididae hosts within supergroups B and F was extremely low. A comprehensive genetic analysis of Wolbachia diversity confirmed specific features of the Wolbachia allelic set in Acrididae hosts. This result can help to elucidate the crucial issue of Wolbachia biology: the route(s) and mechanism(s) of Wolbachia horizontal transmission.

18 August 2020 in Insects
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RBRoman Bykov
Roman Bykov
IKIvan Andreevich Kerchev
Ivan Andreevich Kerchev
MDMary Demenkova
Mary Demenkova
ARArtem Ryabinin
Artem Ryabinin
Yury IlinskyYury Ilinsky
Yury Ilinsky
Wolbachia symbionts are maternally inherited bacteria that are widely distributed among Arthropoda hosts. Wolbachia influence their host biology in diverse ways. They may induce reproductive abnormalities, protect hosts against pathogens and parasites, or benefit hosts through metabolic provisioning. The progeny of an infected female are ordinarily infected with Wolbachia; however, Wolbachia have no future in male host progeny because they cannot transmit the symbiont to the next generation. Here, we analyze native and invasive populations of the four-eyed fir bark beetle (Polygraphus proximus) for Wolbachia prevalence and symbiont genetic diversity. This species is a dangerous pest of Siberian fir (Abies sibirica) forests. The native range of P. proximus includes the territories of the Russian Far East, Japan, Korea, and Northeast China, whereas its invasive range includes West Siberia, with further expansion westward. Surprisingly, we revealed a difference in the patterns of Wolbachia prevalence for males and females. Infection rate and Wolbachia titers were higher in females than in males. ST-533, the only haplotype of Wolbachia supergroup B, was associated with a minimum of three out of the five described mitochondrial haplotypes.

1 November 2014 in Russian Journal of Genetics: Applied Research
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RBRoman Bykov
Roman Bykov
YIYu. Yu. Ilinskii
Yu. Yu. Ilinskii
MVM. A. Voloshina
M. A. Voloshina
IZI. K. Zakharov
I. K. Zakharov
The symbiotic bacterium Wolbachia is widespread in natural Drosophila melanogaster populations. Its frequency in D. melanogaster populations is broadly variable in different regions—from occasional individuals to total infestation. Six genotypes are recognized in this symbiont: wMel, wMel2, wMel3, wMel4, wMelCS, and wMelCS2. Also, the following two genotypes of Wolbachia are everywhere: wMel and wMelCS. The rest belong to rare genotyoes which are spread in a limited area or in laboratory stocks. In spite of the studies of Wolbachia spreading in D. melanogaster populations of the world, the information of its prevalence and genotypic diversity in Eurasian populations is still obscure. We analyzed the prevalence and genotypic diversity of Wolbachia in the natural D. melanogaster population of the city of Nalchik (Kabardino-Balkaria). It is shown that the genotypic composition of Wolbachia and its frequency in the population have remained stable for four years. Two genotypes are present in the population: wMel and wMelCS, with wMel being predominant. We did not find any Wolbachia genotypes in the D. melanogaster population in Nalchik.

15 March 2017 in Ecological genetics
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Yuri TokarevYuri Tokarev
Yuri Tokarev
MYMariya A Yudina
Mariya A Yudina
JMJulia Malysh
Julia Malysh
RBRoman Bykov
Roman Bykov
AFAndrei Nikolaevich Frolov
Andrei Nikolaevich Frolov
Yury IlinskyYury Ilinsky
Yury Ilinsky
Background. Endosymbiotic bacteria of the genus Wolbachia are widespread in arthropods and often cause reproductive abnormalities in lepidopteran insects, including corn borers of the genus Ostrinia. Wolbachia-Ostrinia is a promising model for studies of parasite-host interactions yet parasite prevalence in natural insect host populations remains unknown. Materials and Methods. Molecular genetic screening and statistical analysis is applied to evaluate prevalence rates of Wolbachia in sympatric populations of two corn borer species. Individual genomic DNA samples were extracted from last instar larvae collected in nature from different forage plants. For each sample of DNA showing positive signal with insect-specific primers the detection is performed using three diagnostic loci of Wolbachia: 16SrRNA, gatB and fbpA. Results. Wolbachia-positive signal is obtained for 13.5% larvae of Ostrinia nubilalis (N = 141) and 31.9% larvae of Ostrinia scapulalis (N = 138). In different localities the Wolbachia prevalence ranged from 2.9% (N = 34) to 65.8% (N = 38). Significantly higher rates of Wolbachia prevalence in insects from mugwort and hemp (O. scapulalis) as compared to those from corn (O. nubilalis) are revealed in three out of four localities. Conclusions. Endosymbiotic bacteria of the genus Wolbachia are revealed in natural populations of corn borers for the first time for Eastern Europe. The prevalence rates can be high and this should be taken into consideration when reproductive isolation is examined in population of these hosts as well as establishment of laboratory cultures is performed.

16 November 2025 in Insects
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RBRoman Bykov
Roman Bykov
ESElena Shatalova
Elena Shatalova
IAIrina Andreeva
Irina Andreeva
AKAlevtina Khodakova
Alevtina Khodakova
ARArtem Ryabinin
Artem Ryabinin
Yury IlinskyYury Ilinsky
Yury Ilinsky
Many insect and other arthropod species are maintained as non-model laboratory stocks and are used for fundamental and applied studies. Their biology may be affected by symbionts, such as Wolbachia and Spiroplasma. Thirty stocks of different insect species that are maintained at the Laboratory of biological control of phytophagous and phytopathogens in the Siberian Federal Scientific Centre of Agro-BioTechnologies were screened to find Spiroplasma/Wolbachia–host associations. We used 16S rDNA and fusA loci for Spiroplasma characterization and five MLST genes for Wolbachia. Seven out of thirty stocks harbored symbionts. Five stocks were infected with only Wolbachia, one with only Spiroplasma, and one with both symbionts. Two stocks were occasionally characterized by false-positive signals of Spiroplasma infection that were explained by contamination from food sources, viz. infected insects. Five Wolbachia isolates belonged to supergroup B and one to supergroup A. Only the MLST haplotype of Nabis ferus was previously known (ST-522), while the other haplotypes contained new alleles. One Spiroplasma isolate was clustered in the Ixodetis clade and another was basal to the Apis clade. We noted the importance of non-model insects for fundamental studies of host–symbiont interactions and their significance for applied research and practice.