Peng Fu

Prof. Peng Fu

Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
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Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 April 2014 in Remote Sensing of Environment
Verified
Journal Article
Closed access
Qihao WengQihao Weng
Qihao Weng
Peng FuPeng Fu
Peng Fu
Feng GaoFeng Gao
Feng Gao

1 December 2019 in Remote Sensing of Environment
Verified
Journal Article
Closed access
ZSZhenfeng Shao
Zhenfeng Shao
JCJiajun Cai
Jiajun Cai
Peng FuPeng Fu
Peng Fu
LHLeiqiu Hu
Leiqiu Hu
TLTao Liu
Tao Liu

1 September 2019 in Remote Sensing of Environment
Verified
Journal Article
Open access
KMKatherine Meacham-Hensold
Katherine Meacham-Hensold
CMChristopher M. Montes
Christopher M. Montes
JWJin Wu
Jin Wu
KGKaiyu Guan
Kaiyu Guan
Peng FuPeng Fu
Peng Fu
Carl BernacchiCarl Bernacchi
Carl Bernacchi
Spectroscopy is becoming an increasingly powerful tool to alleviate the challenges of traditional measurements of key plant traits at the leaf, canopy, and ecosystem scales. Spectroscopic methods often rely on statistical approaches to reduce data redundancy and enhance useful prediction of physiological traits. Given the mechanistic uncertainty of spectroscopic techniques, genetic modification of plant biochemical pathways may affect reflectance spectra causing predictive models to lose power. The objectives of this research were to assess over two separate years, whether a predictive model can represent natural and imposed variation in leaf photosynthetic potential for different crop cultivars and genetically modified plants, to assess the interannual capabilities of a partial least square regression (PLSR) model, and to determine whether leaf N is a dominant driver of photosynthesis in PLSR models. In 2016, a PLSR analysis of reflectance spectra coupled with gas exchange data was used to build predictive models for photosynthetic parameters including maximum carboxylation rate of Rubisco (Vc,max), maximum electron transport rate (Jmax) and percentage leaf nitrogen ([N]). The model was developed for wild type and genetically modified plants that represent a wide range of photosynthetic capacities. Results show that hyperspectral reflectance accurately predicted Vc,max, Jmax and [N] for all plants measured in 2016. Applying these PLSR models to plants grown in 2017 resulted in a strong predictive ability relative to gas exchange measurements for Vc,max, but not for Jmax, and not for genotypes unique to 2017. Building a new model including data collected in 2017 resulted in more robust predictions, with R2 increases of 17% for Vc,max. and 13% Jmax. Plants generally have a positive correlation between leaf nitrogen and photosynthesis, however, tobacco with reduced Rubisco (SSuD) had significantly higher [N] despite much lower Vc,max. The PLSR model was able to accurately predict both lower Vc,max and higher leaf [N] for this genotype suggesting that the spectral based estimates of Vc,max and leaf nitrogen [N] are independent. These results suggest that the PLSR model can be applied across years, but only to genotypes used to build the model and that the actual mechanism measured with the PLSR technique is not directly related to leaf [N]. The success of the leaf-scale analysis suggests that similar approaches may be successful at the canopy and ecosystem scales but to use these methods across years and between genotypes at any scale, application of accurately populated physical based models based on radiative transfer principles may be required.

5 April 2021 in IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing
Verified
Journal Article
Open access
QCQimin Cheng
Qimin Cheng
YZYuzhuo Zhou
Yuzhuo Zhou
Peng FuPeng Fu
Peng Fu
YXYuan Xu
Yuan Xu
LZLiang Zhang
Liang Zhang
Because of the rapid growth of multimodal data from the internet and social media, a cross-modal retrieval has become an important and valuable task in recent years.The purpose of the cross-modal retrieval is to obtain the result data in one modality (e.g., image), which is semantically similar to the query data in another modality (e.g., text).In the field of remote sensing, despite a great number of existing works on image retrieval, there has only been a small amount of research on the cross-modal image-text retrieval, due to the scarcity of datasets and the complicated characteristics of remote sensing image data. In this article, we introduce a novel cross-modal image-text retrieval network to establish the direct relationship between remote sensing images and their paired text data. Specifically, in our framework, we designed a semantic alignment module to fully explore the latent correspondence between images and text, in which we used the attention and gate mechanisms to filter and optimize data features so that more discriminative feature representations can be obtained. Experimental results on four benchmark remote sensing datasets, including UCMerced-LandUse-Captions, Sydney-Captions, RSICD, and NWPU-RESISC45-Captions, well showed that our proposed method outperformed other baselines and achieved the state-of-the-art performance in remote sensing image-text retrieval tasks.

3 June 2019 in Frontiers in Plant Science
Verified
Journal Article
Open access
PDF file
Peng FuPeng Fu
Peng Fu
KMKatherine Meacham-Hensold
Katherine Meacham-Hensold
KGKaiyu Guan
Kaiyu Guan
Carl BernacchiCarl Bernacchi
Carl Bernacchi
Global agriculture production is challenged by increasing demands from rising population and a changing climate, which may be alleviated through development of genetically improved crop cultivars. Research into increasing photosynthetic energy conversion efficiency has proposed many strategies to improve production but have yet to yield real-world solutions, largely because of a phenotyping bottleneck. Partial least squares regression (PLSR) is a statistical technique that is increasingly used to relate hyperspectral reflectance to key photosynthetic capacities associated with carbon uptake (maximum carboxylation rate of Rubisco, Vc,max) and conversion of light energy (maximum electron transport rate supporting RuBP regeneration, Jmax) to alleviate this bottleneck. However, its performance varies significantly across different plant species, regions, and growth environments. Thus, to cope with the heterogeneous performances of PLSR, this study aims to develop a new approach to estimate photosynthetic capacities. A framework was developed that combines six machine learning algorithms, including artificial neural network (ANN), support vector machine (SVM), least absolute shrinkage and selection operator (LASSO), random forest (RF), Gaussian process (GP), and PLSR to optimize high-throughput analysis of the two photosynthetic variables. Six tobacco genotypes, including both transgenic and wild-type lines, with a range of photosynthetic capacities were used to test the framework. Leaf reflectance spectra were measured from 400 to 2500 nm using a high-spectral-resolution spectroradiometer. Corresponding photosynthesis vs. intercellular CO2 concentration response curves were measured for each leaf using a leaf gas-exchange system. Results suggested that the mean R2 value of the six regression techniques for predicting Vc,max (Jmax) ranged from 0.60 (0.45) to 0.65 (0.56) with the mean RMSE value varying from 47.1 (40.1) to 54.0 (44.7) μmol m-2 s-1. Regression stacking for Vc,max (Jmax) performed better than the individual regression techniques with increases in R2 of 0.1 (0.08) and decreases in RMSE by 4.1 (6.6) μmol m-2 s-1, equal to 8% (15%) reduction in RMSE. Better predictive performance of the regression stacking is likely attributed to the varying coefficients (or weights) in the level-2 model (the LASSO model) and the diverse ability of each individual regression technique to utilize spectral information for the best modeling performance. Further refinements can be made to apply this stacked regression technique to other plant phenotypic traits.