Gizem Çelebi

Ms. Gizem Çelebi

orcid

Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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GÇGizem Çelebi
Gizem Çelebi
HKHale Kesim
Hale Kesim
EÖEbru Özer
Ebru Özer
OKOzlem Kutlu
Ozlem Kutlu
Ubiquitination is a multi-step enzymatic process that involves the marking of a substrate protein by bonding a ubiquitin and protein for proteolytic degradation mainly via the ubiquitin–proteasome system (UPS). The process is regulated by three main types of enzymes, namely ubiquitin-activating enzymes (E1), ubiquitin-conjugating enzymes (E2), and ubiquitin ligases (E3). Under physiological conditions, ubiquitination is highly reversible reaction, and deubiquitinases or deubiquitinating enzymes (DUBs) can reverse the effect of E3 ligases by the removal of ubiquitin from substrate proteins, thus maintaining the protein quality control and homeostasis in the cell. The dysfunction or dysregulation of these multi-step reactions is closely related to pathogenic conditions; therefore, understanding the role of ubiquitination in diseases is highly valuable for therapeutic approaches. In this review, we first provide an overview of the molecular mechanism of ubiquitination and UPS; then, we attempt to summarize the most common diseases affecting the dysfunction or dysregulation of these mechanisms.

6 March 2024 in The Journal of Physical Chemistry B
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BNBradley Nilsson
Bradley Nilsson
GÇGizem Çelebi
Gizem Çelebi
CDCristiano Dias
Cristiano Dias

25 October 2022 in Cytotechnology
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GÇGizem Çelebi
Gizem Çelebi
AYAbuzer Alp Yetisgin
Abuzer Alp Yetisgin
CECem Erdem
Cem Erdem
ACAziz Cayli
Aziz Cayli
OKOzlem Kutlu
Ozlem Kutlu
SCSibel Cetinel
Sibel Cetinel

1 December 2021 in Progress in Biophysics and Molecular Biology
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Journal Article
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GÇGizem Çelebi
Gizem Çelebi
EÖElif Özçelik
Elif Özçelik
EVEmre Vardar
Emre Vardar
DDDurmus Demir
Durmus Demir

30 July 2021 in IEEE Transactions on Biomedical Engineering
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Journal Article
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TATaher Abbasiasl
Taher Abbasiasl
HSHande Eda Sutova
Hande Eda Sutova
SNSoroush Niazi
Soroush Niazi
GÇGizem Çelebi
Gizem Çelebi
ZKZeynep Karavelioglu
Zeynep Karavelioglu
Ali KosarAli Kosar
Ali Kosar
Objective: Hydrodynamic cavitation is characterized by the formation of bubbles inside a flow due to local reduction of pressure below the saturation vapor pressure. The resulting growth and violent collapse of bubbles lead to a huge amount of released energy. This energy can be implemented in different fields such as heat transfer enhancement, wastewater treatment and chemical reactions. In this study, a cystoscope based on small scale hydrodynamic cavitation was designed and fabricated to exploit the destructive energy of cavitation bubbles for treatment of tumor tissues. The developed device is equipped with a control system, which regulates the movement of the cystoscope in different directions. According to our experiments, the fabricated cystoscope was able to locate the target and expose cavitating flow to the target continuously and accurately. The designed cavitation probe embedded into the cystoscope caused a significant damage to prostate cancer and bladder cancer tissues within less than 15 minutes. The results of our experiments showed that the cavitation probe could be easily coupled with endoscopic devices because of its small diameter. We successfully integrated a biomedical camera, a suction tube, tendon cables, and the cavitation probe into a 6.7 mm diameter cystoscope, which could be controlled smoothly and accurately via a control system. The developed device is considered as a mechanical ablation therapy, can be a solid alternative for minimally invasive tissue ablation methods such as radiofrequency (RF) and laser ablation, and could have lower side effects compared to ultrasound therapy and cryoablation.

16 October 2021 in Pharmacological Reports
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GÇGizem Çelebi
Gizem Çelebi
MAMerve Anapali
Merve Anapali
FDFatma Kaya Dagistanli
Fatma Kaya Dagistanli
AAAyse Seda Akdemir
Ayse Seda Akdemir
DADuygu Aydemir
Duygu Aydemir
EKEvrim Kömürcü-Bayrak
Evrim Kömürcü-Bayrak