Fátima Carneiro

Prof. Fátima Carneiro

Institute of Molecular Pathology and Immunology of the University of Porto (Ipatimup)
orcid

Research Focus & Metrics

Academic Career Length

41Years (1986-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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21 August 2019 in Histopathology
Verified
Journal Article
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INIris D. Nagtegaal
Iris D. Nagtegaal
RORobert D. Odze
Robert D. Odze
DKDavid Klimstra
David Klimstra
VPValerie Paradis
Valerie Paradis
MRMassimo Rugge
Massimo Rugge
TBthe WHO Classification of Tumours Editorial Board
the WHO Classification of Tumours Editorial Board
The WHO Classification of Digestive System Tumours presented in the first volume of the WHO Classification of Tumours series' fifth edition reflects important advancements in our understanding of tumours of the digestive system (table 1). For the first time, certain tumour types are defined as much by their molecular phenotype as their histological characteristics; however, histopathological classification remains the gold standard for diagnosis in most instances. The WHO Classification of Tumours series is designed to be used worldwide, including those settings where a lack of tissue samples or of specific technical facilities limits the pathologist's ability to rely on molecular testing.

6 March 2019 in Endoscopy
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Journal Article
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PPPedro Pimentel-Nunes
Pedro Pimentel-Nunes
DLDiogo Libânio
Diogo Libânio
RMRicardo Marcos-Pinto
Ricardo Marcos-Pinto
MAMiguel Areia
Miguel Areia
MLMarcis Leja
Marcis Leja
MDMario Dinis-Ribeiro
Mario Dinis-Ribeiro
Main Recommendations: Patients with chronic atrophic gastritis or intestinal metaplasia (IM) are at risk for gastric adenocarcinoma. This underscores the importance of diagnosis and risk stratification for these patients. High definition endoscopy with chromoendoscopy (CE) is better than high definition white-light endoscopy alone for this purpose. Virtual CE can guide biopsies for staging atrophic and metaplastic changes and can target neoplastic lesions. Biopsies should be taken from at least two topographic sites (antrum and corpus) and labelled in two separate vials. For patients with mild to moderate atrophy restricted to the antrum there is no evidence to recommend surveillance. In patients with IM at a single location but with a family history of gastric cancer, incomplete IM, or persistent Helicobacter pylori gastritis, endoscopic surveillance with CE and guided biopsies may be considered in 3 years. Patients with advanced stages of atrophic gastritis should be followed up with a high quality endoscopy every 3 years. In patients with dysplasia, in the absence of an endoscopically defined lesion, immediate high quality endoscopic reassessment with CE is recommended. Patients with an endoscopically visible lesion harboring low or high grade dysplasia or carcinoma should undergo staging and treatment. H. pylori eradication heals nonatrophic chronic gastritis, may lead to regression of atrophic gastritis, and reduces the risk of gastric cancer in patients with these conditions, and it is recommended. H. pylori eradication is also recommended for patients with neoplasia after endoscopic therapy. In intermediate to high risk regions, identification and surveillance of patients with precancerous gastric conditions is cost-effective.

1 November 2002 in Cancer Cell
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Journal Article
Closed access
CTCristina Tognon
Cristina Tognon
SKStevan R Knezevich
Stevan R Knezevich
DHDavid Huntsman
David Huntsman
CRCalvin D Roskelley
Calvin D Roskelley
NMNatalya Melnyk
Natalya Melnyk
PSPoul H.B Sorensen
Poul H.B Sorensen

4 November 2017 in Gut
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Journal Article
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RFRui M. Ferreira
Rui M. Ferreira
JPJoana Pereira-Marques
Joana Pereira-Marques
IPInes Pinto-Ribeiro
Ines Pinto-Ribeiro
JCJosé Luis Costa
José Luis Costa
FCFátima Carneiro
Fátima Carneiro
CFCeu Figueiredo
Ceu Figueiredo
Objective: Gastric carcinoma development is triggered by Helicobacter pylori . Chronic H. pylori infection leads to reduced acid secretion, which may allow the growth of a different gastric bacterial community. This change in the microbiome may increase aggression to the gastric mucosa and contribute to malignancy. Our aim was to evaluate the composition of the gastric microbiota in chronic gastritis and in gastric carcinoma. Design: The gastric microbiota was retrospectively investigated in 54 patients with gastric carcinoma and 81 patients with chronic gastritis by 16S rRNA gene profiling, using next-generation sequencing. Differences in microbial composition of the two patient groups were assessed using linear discriminant analysis effect size. Associations between the most relevant taxa and clinical diagnosis were validated by real-time quantitative PCR. Predictive functional profiling of microbial communities was obtained with PICRUSt. Results: The gastric carcinoma microbiota was characterised by reduced microbial diversity, by decreased abundance of Helicobacter and by the enrichment of other bacterial genera, mostly represented by intestinal commensals. The combination of these taxa into a microbial dysbiosis index revealed that dysbiosis has excellent capacity to discriminate between gastritis and gastric carcinoma. Analysis of the functional features of the microbiota was compatible with the presence of a nitrosating microbial community in carcinoma. The major observations were confirmed in validation cohorts from different geographic origins. Conclusions: Detailed analysis of the gastric microbiota revealed for the first time that patients with gastric carcinoma exhibit a dysbiotic microbial community with genotoxic potential, which is distinct from that of patients with chronic gastritis.

23 December 2011 in Endoscopy
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MDM. Dinis-Ribeiro
M. Dinis-Ribeiro
MAMiguel Areia
Miguel Areia
AVA. C. de Vries
A. C. de Vries
RMR. Marcos-Pinto
R. Marcos-Pinto
Matilde Monteiro-SoaresMatilde Monteiro-Soares
Matilde Monteiro-Soares
EKE. J. Kuipers
E. J. Kuipers
Atrophic gastritis, intestinal metaplasia, and epithelial dysplasia of the stomach are common and are associated with an increased risk for gastric cancer. In the absence of guidelines, there is wide disparity in the management of patients with these premalignant conditions. The European Society of Gastrointestinal Endoscopy (ESGE), the European Helicobacter Study Group (EHSG), the European Society of Pathology (ESP) and the Sociedade Portuguesa de Endoscopia Digestiva (SPED) have therefore combined efforts to develop evidence-based guidelines on the management of patients with precancerous conditions and lesions of the stomach (termed MAPS). A multidisciplinary group of 63 experts from 24 countries developed these recommendations by means of repeat online voting and a meeting in June 2011 in Porto, Portugal. The recommendations emphasize the increased cancer risk in patients with gastric atrophy and metaplasia, and the need for adequate staging in the case of high grade dysplasia, and they focus on treatment and surveillance indications and methods. * Chairman, ESGE Educational Committee, and Chairman, SPED Research Committee † Chairperson, ESP Digestive Pathology Working Group ‡ Chairman, ESGE Guidelines Committee § President, Portuguese Society of Digestive Endoscopy ESP Digestive Pathology Working Group ** on behalf of MAPS Participants. Including: Cathomas G (Switzerland), Fedorov ED (Russia), Figueiredo P (Portugal), Goldis A (Romania), Leja M (Latvia), Moehler M (Germany), Plesea E (Romania), Bergman J (The Netherlands), Hamoudi W (Jordan), Almeida R, Annibale B, Lobo LA, Balaban YH, Boeriu A, Burette A, Mallet AC, David L, Delchier J-C, Dobru ED, Fernandes C, Kahaleh M, Kashin S, Lomba-Viana R, Lunet N, Marakhouski K, Moreira-Dias L, Ferreira CF, Pais TP, Rollán A, Sadio A, Santos C, Chu K-M, D'Ambra G, Ellul P, van Grieken N, Lamarque D, Najeeb AA **

20 November 2002 in JNCI: Journal of the National Cancer Institute
Verified
Journal Article
Open access
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CFCeu Figueiredo
Ceu Figueiredo
JMJose Carlos Machado
Jose Carlos Machado
PPPaul Pharoah
Paul Pharoah
Raquel SerucaRaquel Seruca
Raquel Seruca
SSSónia Sousa
Sónia Sousa
MSManuel Sobrinho-Simões
Manuel Sobrinho-Simões
Background: Both Helicobacter pylori genotype and host genetic polymorphisms play a role in determining the clinical consequences of H. pylori infection. We investigated whether there are any combinations of bacterial and host genotypes that are particularly associated with the occurrence of gastric carcinoma. Methods: Genotypic variations in virulence-associated genes of H. pylori vacA (s and m regions) and cagA were determined in 221 subjects with chronic gastritis and 222 patients with gastric carcinoma by polymerase chain reaction (PCR)–line probe assay. Polymorphisms in the human interleukin 1 beta (IL-1B) gene (IL-1B-511*C or IL-1B-511*T) and in the IL-1 receptor antagonist gene (IL-1RN intron 2 variable number of tandem repeats) were evaluated by PCR and single-strand conformation polymorphism analysis. All statistical tests were two-sided. Results: Infection with vacAs1-, vacAm1-, and cagA-positive strains of H. pylori was associated with an increased risk for gastric carcinoma, with odds ratios (ORs) of 17 (95% confidence interval [CI] = 7.8 to 38), 6.7 (95% CI = 3.6 to 12), and 15 (95% CI = 7.4 to 29), respectively. IL-1B-511*T carriers (IL-1B-511*T/*T or IL-1B-511*T/*C) homozygous for the short allele of IL-1RN (IL-1RN*2/*2) had an increased gastric carcinoma risk (OR = 3.3, 95% CI = 1.3 to 8.2). For each combination of bacterial/host genotype, the odds of having gastric carcinoma were greatest in those with both bacterial and host high-risk genotypes: vacAs1/IL-1B-511*T carrier (OR = 87, 95% CI = 11 to 679), vacAm1/IL-1B-511*T carrier (OR = 7.4, 95% CI = 3.2 to 17), cagA-positive/IL-1B-511*T carrier (OR = 25, 95% CI = 8.2 to 77), vacAs1/IL-1RN*2/*2 (OR = 32, 95% CI = 7.8 to 134), vacAm1/IL-1RN*2/*2 (OR = 8.8, 95% CI = 2.2 to 35), and cagA-positive/IL-1RN*2/*2 (OR = 23, 95% CI = 7.0 to 72). Conclusion: Combined bacterial/host genotyping may provide an important tool in defining disease risk and targeting H. pylori eradication to high-risk individuals.