In this paper, we describe the PALM model system 6.0. PALM (formerly an abbreviation for Parallelized Large-eddy Simulation Model and now an independent name) is a Fortran-based code and has been applied for studying a variety of atmospheric and oceanic boundary layers for about 20 years. The model is optimized for use on massively parallel computer architectures. This is a follow-up paper to the PALM 4.0 model description in Maronga et al. (2015). During the last years, PALM has been significantly improved and now offers a variety of new components. In particular, much effort was made to enhance the model with components needed for applications in urban environments, like fully interactive land surface and radiation schemes, chemistry, and an indoor model. This paper serves as an overview paper of the PALM 6.0 model system and we describe its current model core. The individual components for urban applications, case studies, validation runs, and issues with suitable input data are presented and discussed in a series of companion papers in this special issue.

Although trees are numerous in urban areas, their dynamic effects on the wind flow are usually approximated or neglected altogether in many wind engineering studies, especially those based on numerical modeling. This study investigates the effect of the inclusion of trees in numerical simulations of wind flow in urban area. Three approaches are used to include the dynamic effect of trees: the basic approach (tree effects are neglected), the implicit approach (tree effects are included in the surface parameterizations), and the explicit approach (trees are represented by porous media). Several test cases have been adopted in order to cover a wide range of urban complexities, wind directions, foliage densities, and tree planting configurations. The results show that there are significant effects of trees when the explicit approach is used compared to the basic and the implicit approaches. Thus tree effects need to be considered using an explicit approach to simulate wind flow in urban area. Also, many parameters such as wind direction, foliage density, and urban configuration are believed to influence the intensity of trees effects. This study emphasizes the importance to explicitly consider the effects of trees in numerical model investigations for the wind flow in urban areas

The Radiative Transfer Model (RTM) is an explicitly resolved three-dimensional multi-reflection radiation model integrated into the PALM modelling system. It is responsible for modelling complex radiative interactions within the urban canopy. It represents a key component in modelling energy transfer inside the urban layer and consequently PALM's ability to provide explicit simulations of the urban canopy at metre-scale resolution. This paper presents RTM version 3.0, which is integrated into the PALM modelling system version 6.0. This version of RTM has been substantially improved over previous versions. A more realistic representation is enabled by the newly simulated processes, e.g. the interaction of longwave radiation with the plant canopy, evapotranspiration and latent heat flux, calculation of mean radiant temperature, and bidirectional interaction with the radiation forcing model. The new version also features novel discretization schemes and algorithms, namely the angular discretization and the azimuthal ray tracing, which offer significantly improved scalability and computational efficiency, enabling larger parallel simulations. It has been successfully tested on a realistic urban scenario with a horizontal size of over 6 million grid points using 8192 parallel processes.

This paper describes the developing theory and underlying processes of the microscale obstacle-resolving model MITRAS version 2. MITRAS calculates wind, temperature, humidity, and precipitation fields, as well as transport within the obstacle layer using Reynolds averaging. It explicitly resolves obstacles, including buildings and overhanging obstacles, to consider their aerodynamic and thermodynamic effects. Buildings are represented by impermeable grid cells at the building positions so that the wind speed vanishes in these grid cells. Wall functions are used to calculate appropriate turbulent fluxes. Most exchange processes at the obstacle surfaces are considered in MITRAS, including turbulent and radiative processes, in order to obtain an accurate surface temperature. MITRAS is also able to simulate the effect of wind turbines. They are parameterized using the actuator-disk concept to account for the reduction in wind speed. The turbulence generation in the wake of a wind turbine is parameterized by adding an additional part to the turbulence mechanical production term in the turbulent kinetic energy equation. Effects of trees are considered explicitly, including the wind speed reduction, turbulence production, and dissipation due to drag forces from plant foliage elements, as well as the radiation absorption and shading. The paper provides not only documentation of the model dynamics and numerical framework but also a solid foundation for future microscale model extensions.

Including radiative transfer processes within the urban canopy layer into microscale urban climate models (UCMs) is essential to obtain realistic model results. These processes include the interaction of buildings and vegetation with shortwave and longwave radiation, thermal emission, and radiation reflections. They contribute differently to the radiation budget of urban surfaces. Each process requires different computational resources and physical data for the urban elements. This study investigates how much detail modellers should include to parameterize radiative transfer in microscale building-resolving UCMs. To that end, we introduce a stepwise parameterization method to the Parallelized Large-eddy Simulation Model (PALM) system 6.0 to quantify individually the effects of the main radiative transfer processes on the radiation budget and on the flow field. We quantify numerical simulations of both simple and realistic urban configurations to identify the major and the minor effects of radiative transfer processes on the radiation budget. The study shows that processes such as surface and vegetation interaction with shortwave and longwave radiation will have major effects, while a process such as multiple reflections will have minor effects. The study also shows that radiative transfer processes within the canopy layer implicitly affect the incoming radiation since the radiative transfer model is coupled to the radiation model. The flow field changes considerably in response to the radiative transfer processes included in the model. The study identified those processes which are essentially needed to assure acceptable quality of the flow field. These processes are receiving radiation from atmosphere based on the sky-view factors, interaction of urban vegetation with radiation, radiative transfer among urban surfaces, and considering at least single reflection of radiation. Omitting any of these processes may lead to high uncertainties in the model results.