In microalgae, photosynthesis provides energy and sugar phosphates for the biosynthesis of storage and structural carbohydrates, lipids, and nitrogenous proteins. The oleaginous alga Nannochloropsis salina does not preferentially partition photoassimilates among cellulose, chrysolaminarin, and lipids in response to nitrogenous nutrient deprivation. In the present study, we investigated whether genetic impairment of the cellulose synthase gene (CesA) expression would lead to protein accumulation without the accumulation of storage C polymers in N. salina. Three cesA mutants were generated by the CRISPR/Cas9 approach. Cell wall thickness and cellulose content were reduced in the cesA1 mutant, but not in cesA2 or cesA4 cells. CesA1 mutation resulted in a reduction of chrysolaminarin and neutral lipid contents, by 66.3% and 37.1%, respectively, but increased the soluble protein content by 1.8-fold. Further, N. salina cells with a thinned cell wall were susceptible to mechanical stress, resulting in a 1.7-fold enhancement of lipid extractability. Taken together, the previous and current studies strongly suggest the presence of a controlling mechanism that regulates photoassimilate partitioning toward C and N metabolic pathways as well as the cellulose metabolism as a potential target for cost-effective microalgal cell disruption and as a useful protein production platform.

The construction of weirs causes changes in the aquatic environment and affects several aquatic organisms. To understand the ecosystem in the Sangju Weir, Gyeongsangbuk-do Province, variations in the spatiotemporal distribution and composition of microalgae communities were analyzed. Microalgae were collected fortnightly from April to November 2018 from six sites in the Nakdonggang River. There was significant variation in environmental factors, microalgal community structure, and flora. Microalgae communities were dominated by diatoms (e.g., Fragilariacrotonensis, Ulnariaacus, and Aulacoseiraambigua), green algae (e.g., genera Eudorina and Desmodesmus), cyanobacteria (e.g., genera Anabaena and Microcystis). Multidimensional scaling indicated that species composition and diversity were generally similar among sites but varied between the bottom and the surface and middle water layers. Vertical migration of microalgae was difficult to investigate because of the thermocline in the study area and high turbidity in the lower layer. The distribution of microalgae was little affected by the construction of the weir, but the formation of thermocline changed microalgae communities in the water layer.

The morphology and molecular phylogeny of a new haptorid ciliate, Fuscheriides baugilensis sp. nov., discovered in a temporary pond in South Korea, were investigated. The new species is characterized by its small body size (30–55 × 15–20 μm in vivo), oblong to rod-shaped extrusomes in the oral bulge and cytoplasm, 14–16 somatic kineties, two dorsal brush rows, and single subapical ciliary condensation. The phylogenetic analyses based on the 18S rRNA gene sequences show that the family Fuscheriidae is paraphyletic and the species belong to the genera Fuscheriides and Pseudofuscheria cluster together in the same subclade, while Fuscheria is in a different subclade, suggesting that the subapical ciliary condensation characterizing the two former genera has a higher taxonomic value than the shape of extrusomes for genera separation.

Sun-Woo Hong, Seong-Joo Hong, Hyeon-jong Ji, Shin-young Yun, Min-ju Jeong, Choul-Gyun Lee, Bok Yeon Jo, Yu Ho Kim, Jin Woo Kim, Seung Won Nam, and Z-Hun Kim. Korean Society for Biotechnology and Bioengineering Journal 2024;39:119-27. https://doi.org/10.7841/ksbbj.2024.39.4.119

Dermacoccus barathri is the first reported pathogen within the Dermacoccus genus to cause a catheter-related bloodstream infection, which occurred in 2015. In this study, the complete genome assembly of Dermacoccus barathri was constructed, and the complete genome of Dermacoccus barathri FBCC-B549 consists of a single chromosome (3,137,745 bp) without plasmids. The constructed genome of D. barathri was compared with those of two closely related species within the Dermacoccus genus. D. barathri exhibited a pattern similar to Dermacoccus abyssi in terms of gene clusters and synteny analysis. Contrary to previous studies, biosynthetic gene cluster (BGC) analysis for predicting secondary metabolites revealed the presence of the LAP biosynthesis pathway in the complete genome of D. barathri, predicting the potential synthesis of the secondary metabolite plantazolicin. Furthermore, an analysis to investigate the potential pathogenicity of D. barathri did not reveal any antibiotic resistance genes; however, nine virulence factors were identified in the Virulence Factor Database (VFDB). According to these matching results in the VFDB, despite identifying a few factors involved in biofilm formation, further research is required to determine the actual impact of D. barathri on pathogenicity. The complete genome of D. barathri is expected to serve as a valuable resource for future studies on D. barathri, which currently lack sufficient genomic sequence information.