Ibrahim Fatih Cengiz

Dr. Ibrahim Fatih Cengiz

I3Bs – Research Institute on Biomaterials, Biodegradables and Biomimetics, University of Minho, Braga, Portugal

Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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28 December 2013 in Journal of Materials Science: Materials in Medicine
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AHAnne-Marie Haaparanta
Anne-Marie Haaparanta
EJElina Järvinen
Elina Järvinen
Ibrahim Fatih CengizIbrahim Fatih Cengiz
Ibrahim Fatih Cengiz
VEVille Ellä
Ville Ellä
HKHarri T. Kokkonen
Harri T. Kokkonen
MKMinna Kellomäki
Minna Kellomäki

26 September 2018 in Biomaterials Research
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Journal Article
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Ibrahim Fatih CengizIbrahim Fatih Cengiz
Ibrahim Fatih Cengiz
Joaquim OliveiraJoaquim Oliveira
Joaquim Oliveira
RRRui L. Reis
Rui L. Reis
Background: Cell behavior is the key to tissue regeneration. Given the fact that most of the cells used in tissue engineering are anchorage-dependent, their behavior including adhesion, growth, migration, matrix synthesis, and differentiation is related to the design of the scaffolds. Thus, characterization of the scaffolds is highly required. Micro-computed tomography (micro-CT) provides a powerful platform to analyze, visualize, and explore any portion of interest in the scaffold in a 3D fashion without cutting or destroying it with the benefit of almost no sample preparation need. Main body: This review highlights the relationship between the scaffold microstructure and cell behavior, and provides the basics of the micro-CT method. In this work, we also analyzed the original papers that were published in 2016 through a systematic search to address the need for specific improvements in the methods section of the papers including the amount of provided information from the obtained results. Conclusion: Micro-CT offers a unique microstructural analysis of biomaterials, notwithstanding the associated challenges and limitations. Future studies that will include micro-CT characterization of scaffolds should report the important details of the method, and the derived quantitative and qualitative information can be maximized.

4 January 2019 in ACS Applied Materials & Interfaces
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Journal Article
Closed access
Viviana P. RibeiroViviana P. Ribeiro
Viviana P. Ribeiro
Sandra PinaSandra Pina
Sandra Pina
JCJoão Bebiano Costa
João Bebiano Costa
Ibrahim Fatih CengizIbrahim Fatih Cengiz
Ibrahim Fatih Cengiz
Luis García-FernándezLuis García-Fernández
Luis García-Fernández
RRRui M. Reis
Rui M. Reis

1 September 2014 in Osteoarthritis and Cartilage
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Journal Article
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HPH. Pereira
H. Pereira
SCS.G. Caridade
S.G. Caridade
AFA.M. Frias
A.M. Frias
Joana Silva-CorreiaJoana Silva-Correia
Joana Silva-Correia
DPD.R. Pereira
D.R. Pereira
RRRui M. Reis
Rui M. Reis

1 June 2019 in EFORT Open Reviews
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Journal Article
Open access
HPHélder Pereira
Hélder Pereira
Ibrahim Fatih CengizIbrahim Fatih Cengiz
Ibrahim Fatih Cengiz
SGSérgio Gomes
Sérgio Gomes
JEJoão Espregueira-Mendes
João Espregueira-Mendes
PRPedro L. Ripoll
Pedro L. Ripoll
Joaquim OliveiraJoaquim Oliveira
Joaquim Oliveira
Clinical management of meniscal injuries has changed radically in recent years. We have moved from the model of systematic tissue removal (meniscectomy) to understanding the need to preserve the tissue. Based on the increased knowledge of the basic science of meniscal functions and their role in joint homeostasis, meniscus preservation and/or repair, whenever indicated and possible, are currently the guidelines for management. However, when repair is no longer possible or when facing the fact of the previous partial, subtotal or total loss of the meniscus, meniscus replacement has proved its clinical value. Nevertheless, meniscectomy remains amongst the most frequent orthopaedic procedures. Meniscus replacement is currently possible by means of meniscal allograft transplantation (MAT) which provides replacement of the whole meniscus with or without bone plugs/slots. Partial replacement has been achieved by means of meniscal scaffolds (mainly collagen or polyurethane-based). Despite the favourable clinical outcomes, it is still debatable whether MAT is capable of preventing progression to osteoarthritis. Moreover, current scaffolds have shown some fundamental limitations, such as the fact that the newly formed tissue may be different from the native fibrocartilage of the meniscus. Regenerative tissue engineering strategies have been used in an attempt to provide a new generation of meniscal implants, either for partial or total replacement. The goal is to provide biomaterials (acellular or cell-seeded constructs) which provide the biomechanical properties but also the biological features to replace the loss of native tissue. Moreover, these approaches include possibilities for patient-specific implants of correct size and shape, as well as advanced strategies combining cells, bioactive agents, hydrogels or gene therapy. Herein, the clinical evidence and tips concerning MAT, currently available meniscus scaffolds and future perspectives are discussed. Cite this article: EFORT Open Rev 2019;4 DOI: 10.1302/2058-5241.4.180103

19 December 2016 in Scientific Reports
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JCJoão Cardeira-da-Silva
João Cardeira-da-Silva
Paulo GavaiaPaulo Gavaia
Paulo Gavaia
Ignacio FernándezIgnacio Fernández
Ignacio Fernández
Ibrahim Fatih CengizIbrahim Fatih Cengiz
Ibrahim Fatih Cengiz
JMJoana Moreira-Silva
Joana Moreira-Silva
Vincent LaizéVincent Laizé
Vincent Laizé
The ability of zebrafish to fully regenerate its caudal fin has been explored to better understand the mechanisms underlying de novo bone formation and to develop screening methods towards the discovery of compounds with therapeutic potential. Quantifying caudal fin regeneration largely depends on successfully measuring new tissue formation through methods that require optimization and standardization. Here, we present an improved methodology to characterize and analyse overall caudal fin and bone regeneration in adult zebrafish. First, regenerated and mineralized areas are evaluated through broad, rapid and specific chronological and morphometric analysis in alizarin red stained fins. Then, following a more refined strategy, the intensity of the staining within a 2D longitudinal plane is determined through pixel intensity analysis, as an indicator of density or thickness/volume. The applicability of this methodology on live specimens, to reduce animal experimentation and provide a tool for in vivo tracking of the regenerative process, was successfully demonstrated. Finally, the methodology was validated on retinoic acid- and warfarin-treated specimens, and further confirmed by micro-computed tomography. Because it is easily implementable, accurate and does not require sophisticated equipment, the present methodology will certainly provide valuable technical standardization for research in tissue engineering, regenerative medicine and skeletal biology.