Rama Mishra

Dr. Rama Mishra


Research Focus & Metrics

Academic Career Length

34Years (1993-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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10 July 2018 in Journal of Clinical Investigation
Verified
Journal Article
Open access
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SRSuresh B. Rangasamy
Suresh B. Rangasamy
MJMALABENDU JANA
MALABENDU JANA
AVIK ROYAVIK ROY
AVIK ROY
GCGrant Corbett
Grant Corbett
MKMadhuchhanda Kundu
Madhuchhanda Kundu
DPDr. Kalipada Pahan
Dr. Kalipada Pahan
Induction of TLR2 activation depends on its association with the adapter protein MyD88. We have found that TLR2 and MyD88 levels are elevated in the hippocampus and cortex of patients with Alzheimer’s disease (AD) and in a 5XFAD mouse model of AD. Since there is no specific inhibitor of TLR2, to target induced TLR2 from a therapeutic angle, we engineered a peptide corresponding to the TLR2-interacting domain of MyD88 (TIDM) that binds to the BB loop of only TLR2, and not other TLRs. Interestingly, WT TIDM peptide inhibited microglial activation induced by fibrillar Aβ1-42 and lipoteichoic acid, but not 1-methyl-4-phenylpyridinium, dsRNA, bacterial lipopolysaccharide, flagellin, or CpG DNA. After intranasal administration, WT TIDM peptide reached the hippocampus, reduced hippocampal glial activation, lowered Aβ burden, attenuated neuronal apoptosis, and improved memory and learning in 5XFAD mice. However, WT TIDM peptide was not effective in 5XFAD mice lacking TLR2. In addition to its effects in 5XFAD mice, WT TIDM peptide also suppressed the disease process in mice with experimental allergic encephalomyelitis and collagen-induced arthritis. Therefore, selective targeting of the activated status of 1 component of the innate immune system by WT TIDM peptide may be beneficial in AD as well as other disorders in which TLR2/MyD88 signaling plays a role in disease pathogenesis.

29 July 2020 in Cancers
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Journal Article
Open access
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AOAsia Owais
Asia Owais
RMRama Mishra
Rama Mishra
Hiroaki KiyokawaHiroaki Kiyokawa
Hiroaki Kiyokawa
The HECT (Homologous to the E6-AP Carboxyl Terminus)-family protein E6AP (E6-associated protein), encoded by the UBE3A gene, is a multifaceted ubiquitin ligase that controls diverse signaling pathways involved in cancer and neurological disorders. The oncogenic role of E6AP in papillomavirus-induced cancers is well known, with its action to trigger p53 degradation in complex with the E6 viral oncoprotein. However, the roles of E6AP in non-viral cancers remain poorly defined. It is well established that loss-of-function alterations of the UBE3A gene cause Angelman syndrome, a severe neurodevelopmental disorder with autosomal dominant inheritance modified by genomic imprinting on chromosome 15q. Moreover, excess dosage of the UBE3A gene markedly increases the penetrance of autism spectrum disorders, suggesting that the expression level of UBE3A must be regulated tightly within a physiologically tolerated range during brain development. In this review, current the knowledge about the substrates of E6AP-mediated ubiquitination and their functions in cancer and neurological disorders is discussed, alongside with the ongoing efforts to pharmacologically modulate this ubiquitin ligase as a promising therapeutic target.

24 February 2020 in ACS Chemical Biology
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Journal Article
Closed access
RBRick C. Betori
Rick C. Betori
YLYue Liu
Yue Liu
RMRama Mishra
Rama Mishra
SCScott B. Cohen
Scott B. Cohen
SKStephen J. Kron
Stephen J. Kron
KSKarl Scheidt
Karl Scheidt

1 August 2014 in Journal of Biological Chemistry
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AAAleksandar Antanasijevic
Aleksandar Antanasijevic
ABArnab Basu
Arnab Basu
TBTerry L. Bowlin
Terry L. Bowlin
RMRama Mishra
Rama Mishra
Lijun RongLijun Rong
Lijun Rong
MCMichael Caffrey
Michael Caffrey
Influenza outbreaks, particularly the pandemic 1918 H1 and avian H5 strains, are of high concern to public health. The hemagglutinin envelope protein of influenza plays a critical role in viral entry and thus is an attractive target for inhibition of virus entry. The highly conserved stem loop region of hemagglutinin has been shown to undergo critically important conformational changes during the entry process and, moreover, to be a site for inhibition of virus entry by antibodies, small proteins, and small drug-like molecules. In this work we probe the structure-function properties of the H5 hemagglutinin stem loop region by site-directed mutagenesis. We find that most mutations do not disrupt expression, proteolytic processing, incorporation into virus, or receptor binding; however, many of the mutations disrupt the entry process. We further assess the effects of mutations on inhibition of entry by a neutralizing monoclonal antibody (C179) and find examples of increased and decreased sensitivity to the antibody, consistent with the antibody binding site observed by x-ray crystallography. In addition, we tested the sensitivity of the mutants to MBX2329, a small molecule inhibitor of influenza entry. Interestingly, the mutants exhibit increased and decreased sensitivities to MBX2329, which gives further insight into the binding site of the compound on HA and potential mechanisms of escape. Finally, we have modeled the binding site of MBX2329 using molecular dynamics and find that the resulting structure is in good agreement with the mutagenesis results. Together these studies underscore the importance of the stem loop region to HA function and suggest potential sites for therapeutic intervention of influenza entry.

22 November 2011 in Journal of Mathematical Biology
Verified
Journal Article
Closed access
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RMRama Mishra
Rama Mishra
SBShantha Bhushan
Shantha Bhushan

8 April 2000 in The Journal of Chemical Physics
Verified
Journal Article
Open access
RMRama Mishra
Rama Mishra
YLYing-Ting Lin
Ying-Ting Lin
SLShyi-Long Lee
Shyi-Long Lee
The ring-collapse mechanism that suggests the reactions among the mono- to polycyclic carbon clusters has been analyzed using semiempirical AM1 and HF/6-31G* methods. The two cage structures D2 (chiral) and Td (achiral) for the C28 clusters are considered. Basing on the ring-stacking/circumscribing model and the ring-collapse mechanism various precursors are selected along with some appropriate carbon belts. Reactions between the precursors and the belts are found to be endoergic and lead to stable intermediates. All these stacking processes follow gradual and sequential paths. Various possible transition states structures (TSs) have been located and the barrier heights are found to be well within the earlier prescribed limits. Further, stacking the stable intermediates by suitable carbon belts generate the desired cage structures. The second step of the stacking resembles the annealing mechanism for the formation of the cage structures that is essentially an exoergic process. In this annealing process cascade-type bond formation is visualized. Finally, basing on the deformation energies of the precursors and the barrier heights, it is observed that monocyclic precursors are more suitable for the fullerene growth mechanism.