Shubhra Acharya

Mrs. Shubhra Acharya

orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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Verified
Journal Article
Open access
PDF file
SAShubhra Acharya
Shubhra Acharya
ASAntonio Salgado Somoza
Antonio Salgado Somoza
FSFrancesca Maria Stefanizzi
Francesca Maria Stefanizzi
ALAndrew I. Lumley
Andrew I. Lumley
LZLu Zhang
Lu Zhang
Yvan DevauxYvan Devaux
Yvan Devaux
Parkinson’s disease (PD) is a complex and heterogeneous disorder involving multiple genetic and environmental influences. Although a wide range of PD risk factors and clinical markers for the symptomatic motor stage of the disease have been identified, there are still no reliable biomarkers available for the early pre-motor phase of PD and for predicting disease progression. High-throughput RNA-based biomarker profiling and modeling may provide a means to exploit the joint information content from a multitude of markers to derive diagnostic and prognostic signatures. In the field of PD biomarker research, currently, no clinically validated RNA-based biomarker models are available, but previous studies reported several significantly disease-associated changes in RNA abundances and activities in multiple human tissues and body fluids. Here, we review the current knowledge of the regulation and function of non-coding RNAs in PD, focusing on microRNAs, long non-coding RNAs, and circular RNAs. Since there is growing evidence for functional interactions between the heart and the brain, we discuss the benefits of studying the role of non-coding RNAs in organ interactions when deciphering the complex regulatory networks involved in PD progression. We finally review important concepts of harmonization and curation of high throughput datasets, and we discuss the potential of systems biomedicine to derive and evaluate RNA biomarker signatures from high-throughput expression data.

18 January 2019
Verified
Book Chapter
Closed access
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OMOdity Mukherjee
Odity Mukherjee
SAShubhra Acharya
Shubhra Acharya
MRMahendra Rao
Mahendra Rao

Verified
Journal Article
Open access
PDF file
SAShubhra Acharya
Shubhra Acharya
ALAndrew I. Lumley
Andrew I. Lumley
LZLu Zhang
Lu Zhang
Mélanie VausortMélanie Vausort
Mélanie Vausort
Yvan DevauxYvan Devaux
Yvan Devaux
PPPredrag Popovic
Predrag Popovic
Finding novel biomarkers for Parkinson’s disease (PD) is crucial for early disease diagnosis, severity assessment and identifying novel disease-modifying drug targets. Our study aimed at investigating the GATA3 mRNA levels in whole blood samples of idiopathic PD (iPD) patients with different disease severities as a biomarker for iPD. The present study is a cross-sectional, case-control study, with samples obtained from the Luxembourg Parkinson’s cohort (LuxPARK). iPD (N = 319) patients, along with age-matched controls without PD (non-PD; N = 319) were included in this study. Blood GATA3 mRNA expression was measured using quantitative reverse transcription PCR (RT-qPCR) assays. The capacity of GATA3 expression levels to establish the diagnosis of iPD (primary end-point) and assess disease severity (secondary end-point) was determined. The blood levels of GATA3 were significantly lower in iPD patients, compared to non-PD controls (p ≤ 0.001). Logistic regression models showed a significant association of GATA3 expression with iPD diagnosis after adjustment for the confounders (p = 0.005). Moreover, the addition of GATA3 expression to a baseline clinical model improved its iPD diagnosis capacity (p = 0.005). There was a significant association of GATA3 expression levels with the overall disease severity (p = 0.002), non-motor experiences of daily living (nm-EDL; p = 0.003) and sleep disturbances (p = 0.01). Our results suggest that GATA3 expression measured in blood may serve as a novel biomarker and may help in the diagnosis of iPD and assessment of disease severity.

13 April 2023 in Open Research Europe
Verified
Journal Article
Open access
SAShubhra Acharya
Shubhra Acharya
MPMihai Bogdan Preda
Mihai Bogdan Preda
IPIoanna Papatheodorou
Ioanna Papatheodorou
DPDimitra Palioura
Dimitra Palioura
PGPanagiota Giardoglou
Panagiota Giardoglou
ECEU-CardioRNA COST Action CA17129.
EU-CardioRNA COST Action CA17129.
Soft skills are the elementary management, personal, and interpersonal abilities that are vital for an individual to be efficient at workplace or in their personal life. Each work place requires different set of soft skills. Thus, in addition to scientific/technical skills that are easier to access within a short time frame, several key soft skills are essential for the success of a researcher in today’s international work environment. In this paper, the trainees and trainers of the EU-CardioRNA COST Action CA17129 training school on soft skills present basic and advanced soft skills for early career researchers. Here, we particularly emphasize on the importance of transferable and presentation skills, ethics, literature reading and reviewing, research protocol and grant writing, networking, and career opportunities for researchers. All these skills are vital but are often overlooked by some scholars. We also provide tips to ace in aforementioned skills that are crucial in a day-to-day life of early and late career researchers in academia and industry.

12 October 2023 in Open Research Europe
Verified
Journal Article
Open access
SAShubhra Acharya
Shubhra Acharya
MPMihai Bogdan Preda
Mihai Bogdan Preda
IPIoanna Papatheodorou
Ioanna Papatheodorou
DPDimitra Palioura
Dimitra Palioura
PGPanagiota Giardoglou
Panagiota Giardoglou
ECEU-CardioRNA COST Action CA17129.
EU-CardioRNA COST Action CA17129.
Soft skills are the elementary management, personal, and interpersonal abilities that are vital for an individual to be efficient at workplace or in their personal life. Each work place requires different set of soft skills. Thus, in addition to scientific/technical skills that are easier to access within a short time frame, several key soft skills are essential for the success of a researcher in today’s international work environment. In this paper, the trainees and trainers of the EU-CardioRNA COST Action CA17129 training school on soft skills present basic and advanced soft skills for early career researchers. Here, we particularly emphasize on the importance of transferable and presentation skills, ethics, literature reading and reviewing, research protocol and grant writing, networking, and career opportunities for researchers. All these skills are vital but are often overlooked by some scholars. We also provide tips to ace in aforementioned skills that are crucial in a day-to-day life of early and late career researchers in academia and industry.

16 December 2023 in European Heart Journal
Verified
Journal Article
Closed access
SAShubhra Acharya
Shubhra Acharya
SDSaumya Das
Saumya Das
Yvan DevauxYvan Devaux
Yvan Devaux
Emma Louise RobinsonEmma Louise Robinson
Emma Louise Robinson