Mario Martínez-Zarzuela

Dr. Mario Martínez-Zarzuela

Universidad de Valladolid, Valladolid, Spain
orcid

Research Focus & Metrics

Academic Career Length

21Years (2006-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
2 February 2021 in Healthcare
Verified
Journal Article
Open access
PDF file
FPFrancisco Javier Diaz Pernas
Francisco Javier Diaz Pernas
MMMario Martínez-Zarzuela
Mario Martínez-Zarzuela
MAMíriam Antón-Rodríguez
Míriam Antón-Rodríguez
DGDavid González-Ortega
David González-Ortega
In this paper, we present a fully automatic brain tumor segmentation and classification model using a Deep Convolutional Neural Network that includes a multiscale approach. One of the differences of our proposal with respect to previous works is that input images are processed in three spatial scales along different processing pathways. This mechanism is inspired in the inherent operation of the Human Visual System. The proposed neural model can analyze MRI images containing three types of tumors: meningioma, glioma, and pituitary tumor, over sagittal, coronal, and axial views and does not need preprocessing of input images to remove skull or vertebral column parts in advance. The performance of our method on a publicly available MRI image dataset of 3064 slices from 233 patients is compared with previously classical machine learning and deep learning published methods. In the comparison, our method remarkably obtained a tumor classification accuracy of 0.973, higher than the other approaches using the same database.

28 July 2014 in PLOS ONE
Verified
Journal Article
Open access
PDF file
PWPatricia Wollstadt
Patricia Wollstadt
MMMario Martínez-Zarzuela
Mario Martínez-Zarzuela
RVRaul Vicente
Raul Vicente
FPFrancisco Javier Diaz Pernas
Francisco Javier Diaz Pernas
MWMichael Wibral
Michael Wibral
Information theory allows us to investigate information processing in neural systems in terms of information transfer, storage and modification. Especially the measure of information transfer, transfer entropy, has seen a dramatic surge of interest in neuroscience. Estimating transfer entropy from two processes requires the observation of multiple realizations of these processes to estimate associated probability density functions. To obtain these necessary observations, available estimators typically assume stationarity of processes to allow pooling of observations over time. This assumption however, is a major obstacle to the application of these estimators in neuroscience as observed processes are often non-stationary. As a solution, Gomez-Herrero and colleagues theoretically showed that the stationarity assumption may be avoided by estimating transfer entropy from an ensemble of realizations. Such an ensemble of realizations is often readily available in neuroscience experiments in the form of experimental trials. Thus, in this work we combine the ensemble method with a recently proposed transfer entropy estimator to make transfer entropy estimation applicable to non-stationary time series. We present an efficient implementation of the approach that is suitable for the increased computational demand of the ensemble method's practical application. In particular, we use a massively parallel implementation for a graphics processing unit to handle the computationally most heavy aspects of the ensemble method for transfer entropy estimation. We test the performance and robustness of our implementation on data from numerical simulations of stochastic processes. We also demonstrate the applicability of the ensemble method to magnetoencephalographic data. While we mainly evaluate the proposed method for neuroscience data, we expect it to be applicable in a variety of fields that are concerned with the analysis of information transfer in complex biological, social, and artificial systems.

19 February 2019 in Journal of Open Source Software
Verified
Journal Article
Open access
PDF file
PWPatricia Wollstadt
Patricia Wollstadt
Joseph LizierJoseph Lizier
Joseph Lizier
RORaul Vicente Olmedo-Martín
Raul Vicente Olmedo-Martín
CFConor Finn
Conor Finn
MMMario Martínez-Zarzuela
Mario Martínez-Zarzuela
MWMichael Wibral
Michael Wibral

1 February 2014 in Computer Methods and Programs in Biomedicine
Verified
Journal Article
Closed access
DGDavid González-Ortega
David González-Ortega
FPFrancisco Javier Diaz Pernas
Francisco Javier Diaz Pernas
MMMario Martínez-Zarzuela
Mario Martínez-Zarzuela
MAMíriam Antón-Rodríguez
Míriam Antón-Rodríguez

12 August 2010 in Computer-Aided Civil and Infrastructure Engineering
Verified
Journal Article
Open access
PDF file
DBDaniel Boto‐Giralda
Daniel Boto‐Giralda
FPFrancisco Javier Diaz Pernas
Francisco Javier Diaz Pernas
DGDavid González-Ortega
David González-Ortega
JDJosé F. Díez‐Higuera
José F. Díez‐Higuera
MAMíriam Antón-Rodríguez
Míriam Antón-Rodríguez
Isabel De La Torre DíezIsabel De La Torre Díez
Isabel De La Torre Díez
In their goal to effectively manage the use of existing infrastructures, intelligent transportation systems require precise forecasting of near-term traffic volumes to feed real-time analytical models and traffic surveillance tools that alert of network links reaching their capacity. This article proposes a new methodological approach for short-term predictions of time series of volume data at isolated cross sections. The originality in the computational modeling stems from the fit of threshold values used in the stationary wavelet-based denoising process applied on the time series, and from the determination of patterns that characterize the evolution of its samples over a fixed prediction horizon. A self-organizing fuzzy neural network is optimized in its configuration parameters for learning and recognition of these patterns. Four real-world data sets from three interstate roads are considered for evaluating the performance of the proposed model. A quantitative comparison made with the results obtained by four other relevant prediction models shows a favorable outcome.

1 January 2015 in Procedia Computer Science
Verified
Journal Article
Open access
MPMiguel Pedraza-Hueso
Miguel Pedraza-Hueso
SMSergio Martín-Calzón
Sergio Martín-Calzón
FPFrancisco Javier Diaz Pernas
Francisco Javier Diaz Pernas
MMMario Martínez-Zarzuela
Mario Martínez-Zarzuela
This paper introduces the development of a customized virtual reality system based on a serious game which allows the user to carry out physical and cognitive rehabilitation therapies using a natural user interface based on Microsoft© Kinect. Within these serious games you can find the exergames. It is a type of serious game which aims to stimulate body mobility through an immersive experience that situates the user inside virtual interactive landscapes. This type of game has become popular in recent years thanks to the creation of consoles like Nintendo Wii, Playstation or Xbox, which use gestural interaction game interfaces. Likewise, these technologies have become extremely useful tools in rehabilitation, and they are expected to permit a reduction of costs in socio-sanitary environments. The proposed virtual reality platform consists of different types of exercises by which the user is able to train or rehabilitate several aspects such as strength, aerobic or cognitive capacities. The system has been modelled so that the physical presence of a therapist is not required during the course of the session and there is no need to wear any kind of marker or sensor. Moreover, all parameters of the different exercises can be configured without the physical presence of a therapist. The reports of each session can also be read offline, therefore, the therapist will always know if a user has performed the session in a good way and act accordingly modifying whatever he deems necessary in the patient's therapy. Due to these facts the system developed and presented in this article is a rehabilitation system based on remote assistance. It is important that this type of serious games accomplish all the functionalities a videogame fulfils at the same time that accomplish specific functionalities in its therapeutic environment. Remarkably, it is required an adaptation to the patient's abilities to avoid frustration and provide immediate feedback to the user during the exercises. In our system, the users are monitored and receive an audio-visual feedback during the session, so that they know in real-time if they are correctly doing the exercises of the specific therapy that was designed for them