Vivek Vijay Thacker

Dr. Vivek Vijay Thacker

School of Life Sciences, Swiss Federal Institute of Technology in Lausanne (EPFL), 1015 Lausanne, Switzerland
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Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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2 August 2023 in Nature
Verified
Journal Article
Open access
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MGMuhammet F. Gulen
Muhammet F. Gulen
NSNatasha Samson
Natasha Samson
AKAlexander Keller
Alexander Keller
MSMarius Schwabenland
Marius Schwabenland
CLChong Liu
Chong Liu
AAAndrea Ablasser
Andrea Ablasser
Low-grade inflammation is a hallmark of old age and a central driver of ageing-associated impairment and disease1. Multiple factors can contribute to ageing-associated inflammation2; however, the molecular pathways that transduce aberrant inflammatory signalling and their impact in natural ageing remain unclear. Here we show that the cGAS–STING signalling pathway, which mediates immune sensing of DNA3, is a critical driver of chronic inflammation and functional decline during ageing. Blockade of STING suppresses the inflammatory phenotypes of senescent human cells and tissues, attenuates ageing-related inflammation in multiple peripheral organs and the brain in mice, and leads to an improvement in tissue function. Focusing on the ageing brain, we reveal that activation of STING triggers reactive microglial transcriptional states, neurodegeneration and cognitive decline. Cytosolic DNA released from perturbed mitochondria elicits cGAS activity in old microglia, defining a mechanism by which cGAS–STING signalling is engaged in the ageing brain. Single-nucleus RNA-sequencing analysis of microglia and hippocampi of a cGAS gain-of-function mouse model demonstrates that engagement of cGAS in microglia is sufficient to direct ageing-associated transcriptional microglial states leading to bystander cell inflammation, neurotoxicity and impaired memory capacity. Our findings establish the cGAS–STING pathway as a driver of ageing-related inflammation in peripheral organs and the brain, and reveal blockade of cGAS–STING signalling as a potential strategy to halt neurodegenerative processes during old age.

19 January 2022 in Nature
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Journal Article
Open access
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JDJeremy Di Domizio
Jeremy Di Domizio
MGMuhammet F. Gulen
Muhammet F. Gulen
FSFanny Saidoune
Fanny Saidoune
VTVivek Vijay Thacker
Vivek Vijay Thacker
AYAhmad Yatim
Ahmad Yatim
AAAndrea Ablasser
Andrea Ablasser
COVID-19, which is caused by infection with SARS-CoV-2, is characterized by lung pathology and extrapulmonary complications1,2. Type I interferons (IFNs) have an essential role in the pathogenesis of COVID-19 (refs 3–5). Although rapid induction of type I IFNs limits virus propagation, a sustained increase in the levels of type I IFNs in the late phase of the infection is associated with aberrant inflammation and poor clinical outcome5–17. Here we show that the cyclic GMP-AMP synthase (cGAS)–stimulator of interferon genes (STING) pathway, which controls immunity to cytosolic DNA, is a critical driver of aberrant type I IFN responses in COVID-19 (ref. 18). Profiling COVID-19 skin manifestations, we uncover a STING-dependent type I IFN signature that is primarily mediated by macrophages adjacent to areas of endothelial cell damage. Moreover, cGAS–STING activity was detected in lung samples from patients with COVID-19 with prominent tissue destruction, and was associated with type I IFN responses. A lung-on-chip model revealed that, in addition to macrophages, infection with SARS-CoV-2 activates cGAS–STING signalling in endothelial cells through mitochondrial DNA release, which leads to cell death and type I IFN production. In mice, pharmacological inhibition of STING reduces severe lung inflammation induced by SARS-CoV-2 and improves disease outcome. Collectively, our study establishes a mechanistic basis of pathological type I IFN responses in COVID-19 and reveals a principle for the development of host-directed therapeutics.

13 March 2014 in Nature Communications
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Journal Article
Closed access
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VTVivek Vijay Thacker
Vivek Vijay Thacker
LHLars O. Herrmann
Lars O. Herrmann
DSDaniel O. Sigle
Daniel O. Sigle
TZTao Zhang
Tao Zhang
TLTim Liedl
Tim Liedl
UKUlrich F. Keyser
Ulrich F. Keyser

22 April 2013 in ACS Nano
Verified
Journal Article
Closed access
WLWenhong Li
Wenhong Li
NBNicholas A. W. Bell
Nicholas A. W. Bell
SHSilvia Hernández-Ainsa
Silvia Hernández-Ainsa
VTVivek Vijay Thacker
Vivek Vijay Thacker
ATAlana M Thackray
Alana M Thackray
UKUlrich F. Keyser
Ulrich F. Keyser

6 September 2013 in Angewandte Chemie International Edition
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Journal Article
Open access
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JBJonathan R. Burns
Jonathan R. Burns
KGKerstin Göpfrich
Kerstin Göpfrich
JWJames W. Wood
James W. Wood
VTVivek Vijay Thacker
Vivek Vijay Thacker
ESEugen Stulz
Eugen Stulz
SHStefan Howorka
Stefan Howorka
Holding tight: An artificial membrane nanopore assembled from DNA oligonucleotides carries porphyrin tags (red), which anchor the nanostructure into the lipid bilayer. The porphyrin moieties also act as fluorescent dyes to aid the microscopic visualization of the DNA nanopore.

24 November 2020 in eLife
Verified
Journal Article
Open access
VTVivek Vijay Thacker
Vivek Vijay Thacker
Neeraj DharNeeraj Dhar
Neeraj Dhar
KSKunal Sharma
Kunal Sharma
RBRiccardo Barrile
Riccardo Barrile
KKKatia Karalis
Katia Karalis
JMJohn D McKinney
John D McKinney
We establish a murine lung-on-chip infection model and use time-lapse imaging to reveal the dynamics of host-Mycobacterium tuberculosis interactions at an air-liquid interface with a spatiotemporal resolution unattainable in animal models and to probe the direct role of pulmonary surfactant in early infection. Surfactant deficiency results in rapid and uncontrolled bacterial growth in both macrophages and alveolar epithelial cells. In contrast, under normal surfactant levels, a significant fraction of intracellular bacteria are non-growing. The surfactant-deficient phenotype is rescued by exogenous addition of surfactant replacement formulations, which have no effect on bacterial viability in the absence of host cells. Surfactant partially removes virulence-associated lipids and proteins from the bacterial cell surface. Consistent with this mechanism, the attenuation of bacteria lacking the ESX-1 secretion system is independent of surfactant levels. These findings may partly explain why smokers and elderly persons with compromised surfactant function are at increased risk of developing active tuberculosis.