Sabino Pacheco

Dr. Sabino Pacheco

orcid

Research Focus & Metrics

Academic Career Length

21Years (2006-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 November 2009 in Journal of Biological Chemistry
Verified
Journal Article
Open access
PDF file
SPSabino Pacheco
Sabino Pacheco
IGIsabel Gómez
Isabel Gómez
Ivan Arenas-SosaIvan Arenas-Sosa
Ivan Arenas-Sosa
GSGLORIA SAAB-RINCON
GLORIA SAAB-RINCON
CAClaudia Rodriguez Almazan
Claudia Rodriguez Almazan
Mario SoberonMario Soberon
Mario Soberon
Bacillus thuringiensis Cry toxins are used worldwide as insecticides in agriculture, in forestry, and in the control of disease transmission vectors. In the lepidopteran Manduca sexta, cadherin (Bt-R1) and aminopeptidase-N (APN) function as Cry1A toxin receptors. The interaction with Bt-R1 promotes cleavage of the amino-terminal end, including helix α-1 and formation of prepore oligomer that binds to APN, leading to membrane insertion and pore formation. Loops of domain II of Cry1Ab toxin are involved in receptor interaction. Here we show that Cry1Ab mutants located in domain II loop 3 are affected in binding to both receptors and toxicity against Manduca sexta larvae. Interaction with both receptors depends on the oligomeric state of the toxin. Monomers of loop 3 mutants were affected in binding to APN and to a cadherin fragment corresponding to cadherin repeat 12 but not with a fragment comprising cadherin repeats 7–12. In contrast, the oligomers of loop 3 mutants were affected in binding to both Bt-R1 fragments but not to APN. Toxicity assays showed that either monomeric or oligomeric structures of Cry1Ab loop 3 mutations were severely affected in insecticidal activity. These data suggest that loop 3 is differentially involved in the binding with both receptor molecules, depending on the oligomeric state of the toxin and also that possibly a “ping pong” binding mechanism with both receptors is involved in toxin action.

1 January 2010 in Insect Biochemistry and Molecular Biology
Verified
Journal Article
Closed access
ACAngeles Cancino-Rodezno
Angeles Cancino-Rodezno
CACynthia Alexander
Cynthia Alexander
RVRoberto Villaseñor
Roberto Villaseñor
SPSabino Pacheco
Sabino Pacheco
HPHelena Porta
Helena Porta
Alejandra BravoAlejandra Bravo
Alejandra Bravo

1 March 2009 in Peptides
Verified
Journal Article
Closed access
SPSabino Pacheco
Sabino Pacheco
IGIsabel Gómez
Isabel Gómez
SGSarjeet S. Gill
Sarjeet S. Gill
Alejandra BravoAlejandra Bravo
Alejandra Bravo
Mario SoberonMario Soberon
Mario Soberon

13 May 2014 in PLOS ONE
Verified
Journal Article
Open access
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ACAgustín Correa
Agustín Correa
SPSabino Pacheco
Sabino Pacheco
AMAriel E. Mechaly
Ariel E. Mechaly
GOGonzalo Obal
Gonzalo Obal
GBGhislaine Béhar
Ghislaine Béhar
FPFrédéric Pecorari
Frédéric Pecorari
Glycosidases are associated with various human diseases. The development of efficient and specific inhibitors may provide powerful tools to modulate their activity. However, achieving high selectivity is a major challenge given that glycosidases with different functions can have similar enzymatic mechanisms and active-site architectures. As an alternative approach to small-chemical compounds, proteinaceous inhibitors might provide a better specificity by involving a larger surface area of interaction. We report here the design and characterization of proteinaceous inhibitors that specifically target endoglycosidases representative of the two major mechanistic classes; retaining and inverting glycosidases. These inhibitors consist of artificial affinity proteins, Affitins, selected against the thermophilic CelD from Clostridium thermocellum and lysozyme from hen egg. They were obtained from libraries of Sac7d variants, which involve either the randomization of a surface or the randomization of a surface and an artificially-extended loop. Glycosidase binders exhibited affinities in the nanomolar range with no cross-recognition, with efficient inhibition of lysozyme (Ki = 45 nM) and CelD (Ki = 95 and 111 nM), high expression yields in Escherichia coli, solubility, and thermal stabilities up to 81.1°C. The crystal structures of glycosidase-Affitin complexes validate our library designs. We observed that Affitins prevented substrate access by two modes of binding; covering or penetrating the catalytic site via the extended loop. In addition, Affitins formed salt-bridges with residues essential for enzymatic activity. These results lead us to propose the use of Affitins as versatile selective glycosidase inhibitors and, potentially, as enzymatic inhibitors in general.

1 February 2017 in Journal of Biological Chemistry
Verified
Journal Article
Open access
YXYutao Xiao
Yutao Xiao
QDQing Dai
Qing Dai
RHRuqin Hu
Ruqin Hu
SPSabino Pacheco
Sabino Pacheco
YYYongbo Yang
Yongbo Yang
KWKongming Wu
Kongming Wu
Transgenic plants that produce Bacillus thuringiensis (Bt) crystalline (Cry) toxins are cultivated worldwide to control insect pests. Resistance to B. thuringiensis toxins threatens this technology, and although different resistance mechanisms have been identified, some have not been completely elucidated. To gain new insights into these mechanisms, we performed multiple back-crossing from a 3000-fold Cry1Ac-resistant BtR strain from cotton bollworm (Helicoverpa armigera), isolating a 516-fold Cry1Ac-resistant strain (96CAD). Cry1Ac resistance in 96CAD was tightly linked to a mutant cadherin allele (mHaCad) that contained 35 amino acid substitutions compared with HaCad from a susceptible strain (96S). We observed significantly reduced levels of the mHaCad protein on the surface of the midgut epithelium in 96CAD as compared with 96S. Expression of both cadherin alleles from 96CAD and 96S in insect cells and immunofluorescence localization in insect midgut tissue sections showed that the HaCAD protein from 96S localizes on the cell membrane, whereas the mutant 96CAD-mHaCad was retained in the endoplasmic reticulum (ER). Mapping of the mutations identified a D172G substitution mainly responsible for cadherin mislocalization. Our finding of a mutation affecting membrane receptor trafficking represents an unusual and previously unrecognized B. thuringiensis resistance mechanism.

1 July 2018 in Journal of Biological Chemistry
Verified
Journal Article
Open access
PDF file
ZWZeyu Wang
Zeyu Wang
LFLongfa Fang
Longfa Fang
ZZZishan Zhou
Zishan Zhou
SPSabino Pacheco
Sabino Pacheco
IGIsabel Gómez
Isabel Gómez
Alejandra BravoAlejandra Bravo
Alejandra Bravo
The bacterium Bacillus thuringiensis produces several insecticidal proteins, such as the crystal proteins (Cry) and the vegetative insecticidal proteins (Vip). In this work, we report that a specific interaction between two B. thuringiensis toxins creates insecticidal synergism and unravel the molecular basis of this interaction. When applied together, the three-domain Cry toxin, Cry9Aa and the Vip, Vip3Aa, exhibited high insecticidal activity against an important insect pest, the Asiatic rice borer (Chilo suppressalis). We found that these two proteins bind specifically to brush border membrane vesicles of C. suppressalis, and that they do not share binding sites, since no-binding competition was observed between them. Binding assays revealed that the Cry9Aa and Vip3Aa proteins interacted with high affinity. We mapped their specific interacting regions by analyzing binding of Cry9Aa to overlapping fragments of Vip3Aa and by analyzing binding of Vip3Aa to individual domains of Cry9Aa. Binding to peptide arrays helped narrow the binding sites to the domain II-loop3 of Cry9Aa and to 428TKKMKTL434 in Vip3Aa. Site-directed mutagenesis confirmed that these binding regions participate in binding that directly correlates with the synergism between the two proteins. In summary, we show that the B. thuringiensis Cry9Aa and Vip3Aa toxins display potent synergy based on a specific interaction between them. Our results further our understanding of the complex synergistic activities among B. thuringiensis toxins and are highly relevant to the development of toxin combinations for effective insect control and for delaying development of insect resistance.