Savanna ecosystems are challenging to map and monitor as their vegetation is highly dynamic in space and time. Understanding the structural diversity and biomass distribution of savanna vegetation requires high-resolution measurements over large areas and at regular time intervals. These requirements cannot currently be met through field-based inventories nor spaceborne satellite remote sensing alone. UAV-based remote sensing offers potential as an intermediate scaling tool, providing acquisition flexibility and cost-effectiveness. Yet despite the increased availability of lightweight LiDAR payloads, the suitability of UAV-based LiDAR for mapping and monitoring savanna 3D vegetation structure is not well established. We mapped a 1 ha savanna plot with terrestrial-, mobile- and UAV-based laser scanning (TLS, MLS, and ULS), in conjunction with a traditional field-based inventory (n = 572 stems > 0.03 m). We treated the TLS dataset as the gold standard against which we evaluated the degree of complementarity and divergence of structural metrics from MLS and ULS. Sensitivity analysis showed that MLS and ULS canopy height models (CHMs) did not differ significantly from TLS-derived models at spatial resolutions greater than 2 m and 4 m respectively. Statistical comparison of the resulting point clouds showed minor over- and under-estimation of woody canopy cover by MLS and ULS, respectively. Individual stem locations and DBH measurements from the field inventory were well replicated by the TLS survey (R = 0.89, RMSE = 0.024 m), which estimated above-ground woody biomass to be 7% greater than field-inventory estimates (44.21 Mg ha vs 41.08 Mg ha). Stem DBH could not be reliably estimated directly from the MLS or ULS, nor indirectly through allometric scaling with crown attributes (R = 0.36, RMSE = 0.075 m). MLS and ULS show strong potential for providing rapid and larger area capture of savanna vegetation structure at resolutions suitable for many ecological investigations; however, our results underscore the necessity of nesting TLS sampling within these surveys to quantify uncertainty. Complementing large area MLS and ULS surveys with TLS sampling will expand our options for the calibration and validation of multiple spaceborne LiDAR, SAR, and optical missions.
Understorey vegetation plays an important role in many ecosystems, yet identifying and monitoring understorey vegetation through remote sensing has proved a challenge for researchers and land managers because understorey plants tend to be small, spatially and spectrally similar, and are often blocked by the overstorey. The emergence of Unmanned Aerial Systems (UAS) is revolutionising how vegetation is measured, and may allow us to measure understorey species where traditional remote sensing previously could not. The goal of this paper was to review current literature and assess the current capability of UAS to identify and monitor understorey vegetation. From the literature, we focused on the technical attributes that limit the ability to monitor understorey vegetation—specifically (1) spatial resolution, (2) spectral sensitivity, (3) spatial extent, and (4) temporal frequency at which a sensor acquires data. We found that UAS have provided improved levels of spatial resolution, with authors reporting successful classifications of understorey vegetation at resolutions of between 3 mm and 200 mm. Species discrimination can be achieved by targeting flights to correspond with phenological events to allow the detection of species-specific differences. We provide recommendations as to how UAS attributes can be tailored to help identify and monitor understorey species.
5 February 2020 in Journal of Geophysical Research: Biogeosciences
The riverine export of carbon is expected to be driven by changes in connectivity between source areas and streams. Yet we lack a thorough understanding of the relative contributions of different water sources to the dissolved carbon flux, and of the way these contributions vary with seasonal changes in flow connectivity. Here we assess the temporal variations in water and associated dissolved inorganic carbon (DIC) sources and fluxes in a wet‐dry tropical river of northern Australia over two years. We use linear mixing models integrated into a Bayesian framework to determine the relative contributions of rainfall, seasonal wetlands, shallow groundwater, and a deep carbonate aquifer to riverine DIC fluxes, which we relate to the age of water sources. Our results suggest extreme shifts in water and DIC sources between the wet and dry seasons. Under wet conditions, most DIC was of biogenic origin and transported by relatively young water sources originating from shallow groundwater and wetlands. As rainfall ceased, the wetlands either dried out or became disconnected from the stream network. From this stage, DIC switched to a geogenic origin, nearly entirely conveyed via older water sources from the carbonate formation. Our findings demonstrate the importance of changing patterns of connectivity when evaluating riverine DIC export from catchments. This work also illustrates the need to systematically partition DIC fluxes between biogenic and geogenic sources, if we are to quantify how the riverine export of carbon affects net carbon soil storage.
The diameter distribution of savanna tree populations is a valuable indicator of savanna health because changes in the number and size of trees can signal a shift from savanna to grassland or forest. Savanna diameter distributions have traditionally been monitored with forestry techniques, where stem diameter at breast height (DBH) is measured in the field within defined sub-hectare plots. However, because the spatial scale of these plots is often misaligned with the scale of variability in tree populations, there is a need for techniques that can scale-up diameter distribution surveys. Dense point clouds collected from uncrewed aerial vehicle laser scanners (UAV-LS), also known as drone-based LiDAR (Light Detection and Ranging), can be segmented into individual tree crowns then related to stem diameter with the application of allometric scaling equations. Here, we sought to test the potential of UAV-LS tree segmentation and allometric scaling to model the diameter distributions of savanna trees. We collected both UAV-LS and field-survey data from five one-hectare savanna woodland plots in northern Australia, which were divided into two calibration and three validation plots. Within the two calibration plots, allometric scaling equations were developed by linking field-surveyed DBH to the tree metrics of manually delineated tree crowns, where the best performing model had a bias of 1.8% and the relatively high RMSE of 39.2%. A segmentation algorithm was then applied to segment individual tree crowns from UAV-LS derived point clouds, and individual tree level segmentation accuracy was assessed against the manually delineated crowns. 47% of crowns were accurately segmented within the calibration plots and 68% within the validation plots. Using the site-specific allometry, DBH was modelled from crown metrics within all five plots, and these modelled results were compared to field-surveyed diameter distributions. In all plots, there were significant differences between field-surveyed and UAV-LS modelled diameter distributions, which became similar at two of the plots when smaller trees (<10 cm DBH) were excluded. Although the modelled diameter distributions followed the overall trend of field surveys, the non-significant result demonstrates a need for the adoption of remotely detectable proxies of tree size which could replace DBH, as well as more accurate tree detection and segmentation methods for savanna ecosystems.
Context: Forest restoration plays an important role in global efforts to slow biodiversity loss and mitigate climate change. Vegetation in remnant forests can form striking patterns that relate to ecological processes, but restoration targets tend to overlook spatial pattern. While observations of intact reference ecosystems can help to inform restoration targets, field surveys are ill-equipped to map and quantify spatial pattern at a range of scales, and new approaches are needed.Objective: This review sought to explore practical options for creating landscape-scale forest restoration targets that embrace spatial pattern.Methods: We assessed how hierarchy theory, satellite remote sensing, landscape pattern analysis, drone-based remote sensing and spatial point pattern analysis could be applied to assess the spatial pattern of reference landscapes and inform forest restoration targets.Results: Hierarchy theory provides an intuitive framework for stratifying landscapes as nested hierarchies of sub-catchments, forest patches and stands of trees. Several publicly available tools can map patches within landscapes, and landscape pattern analysis can be applied to quantify the spatial pattern of these patches. Drones can collect point clouds and orthomosaics at the stand scale, a plethora of software can create maps of individual trees, and spatial point pattern analysis can be applied to quantify the spatial pattern of mapped trees.Conclusions: This review explored several practical options for producing landscape scale forest restoration targets that embrace spatial pattern. With the decade on ecosystem restoration underway, there is a pressing need to refine and operationalise these ideas.