A procedure for both vertical canopy structure analysis and 3D single tree modelling based on Lidar point cloud is presented in this paper. The whole area of research is segmented into small study cells by a raster net. For each cell, a normalized point cloud whose point heights represent the absolute heights of the ground objects is generated from the original Lidar raw point cloud. The main tree canopy layers and the height ranges of the layers are detected according to a statistical analysis of the height distribution probability of the normalized raw points. For the 3D modelling of individual trees, individual trees are detected and delineated not only from the top canopy layer but also from the sub canopy layer. The normalized points are resampled into a local voxel space. A series of horizontal 2D projection images at the different height levels are then generated respect to the voxel space. Tree crown regions are detected from the projection images. Individual trees are then extracted by means of a pre-order forest traversal process through all the tree crown regions at the different height levels. Finally, 3D tree crown models of the extracted individual trees are reconstructed. With further analyses on the 3D models of individual tree crowns, important parameters such as crown height range, crown volume and crown contours at the different height levels can be derived.

Structural analysis of forests by UAV is currently growing in popularity. Given the reduction in platform costs, and the number of algorithms available to analyze data output, the number of applications has grown rapidly. Forest structures are not only linked to economic value in forestry, but also to biodiversity and vulnerability issues. LiDAR remains the most promising technique for forest structural assessment, but small LiDAR sensors suitable for UAV applications are expensive and are limited to a few manufactures. The estimation of 3D-structures from two-dimensional image sequences called ‘Structure from motion’ (SfM) overcomes this limitation by photogrammetrically reconstructing point clouds similar to those rendered from LiDAR sensors. The result of these techniques in highly structured terrain strongly depends on the methods employed during image acquisition, therefore structural indices might be vulnerable to misspecifications in flight campaigns. In this paper, we outline how image overlap and ground sampling distances affect image reconstruction completeness in 2D and 3D. Higher image overlaps and coarser GSDs have a clearly positive influence on reconstruction quality. Therefore, higher accuracy requirements in the GSD must be compensated by a higher image overlap. The best results are achieved with an image overlap of > 95% and a resolution of > 5 cm. The most important environmental factors have been found to be wind and terrain elevation, which could be an indicator of vegetation density.

In the past, many algorithms have been applied for three-dimensional (3-D) single tree extraction using Airborne Laser Scanner (ALS) data. Clustering based algorithms are widely used in different applications but rarely being they used in the field of forestry using ALS data as an input. In this paper, a comparative qualitative study was conducted using the iterative partitioning and hierarchical clustering based mechanisms and full waveform ALS data as an input to extract the individual trees/tree crowns in their most appropriate shape. The full waveform LIght Detection And Ranging (LIDAR) data was collected from the Waldkirch black forest area in the south-western part of Germany in August 2005 with density of 4–5 points/m². Both the clustering algorithms were used in their original and modified form for a comparative qualitative analysis of the results obtained in the form of individual clusters containing 3-D points for each tree/tree crown. A total of 378 trees were found in all the 1.2 ha area with height ranging from 15 m to 50.9 m. The forest contains mainly older trees with deciduous, coniferous and mixed stands. The findings showed that among the three kind of clustering methods applied (normal k-means, modified k-means and hierarchical clustering), the modified k-means algorithm using external seed points and scaling down the height for initialization of the clustering process was the most promising method for the extraction of clusters of individual trees/tree crowns. A 3-D reconstruction of extracted individual clusters was carried out using QHull algorithm. In this study, the result was not possible to validate quantitatively due to lack of the field inventory data.

A literature review of new publications in the field of 3D data for forest applications shows that the application of airborne laser scanner data (ALS) is in the focus of research today due to its great potential for practical applications. While there is a lot of research carried out to derive forest management parameters based on laser metrics deduced from a single tree assessment or a statistical area based assessment, the delineation of stand or sub‐stand units derived from laser metrics itself is a rather new approach. In order to describe stand characteristics statistical grid cell approaches or single tree approaches have been developed. The LIDAR based segmentation of stand or sub‐stand units is rarely documented. This article provides information on enhanced processes to delineate stand or sub‐stand units and to extract different forest information based on airborne laser derived parameters. For the stand delineation an automatic process was developed which provides a stand or sub‐stand unit delineation which is according to the first results sufficiently uniform within stands and sufficiently different in species, age class, height class, structure and composition between stands in order to be distinguishable from adjacent areas. With a combined method the stand boundaries as they are established by the mapping units today, as well as sub‐stand units which have in common physical characteristics indicating the same management disposition, were assessed. Finally a first validation of the forest stand unit delineation is provided, indicating the high potential of ALS data for separating stand units.

The detection of individual trees in a larch plantation could improve the management efficiency and production prediction. This study introduced a two-stage individual tree crown (ITC) segmentation method for airborne light detection and ranging (LiDAR) point clouds, focusing on larch plantation forests with different stem densities. The two-stage segmentation method consists of the region growing and morphology segmentation, which combines advantages of the region growing characteristics and the detailed morphology structures of tree crowns. The framework comprises five steps: (1) determination of the initial dominant segments using a region growing algorithm, (2) identification of segments to be redefined based on the 2D hull convex area of each segment, (3) establishment and selection of profiles based on the tree structures, (4) determination of the number of trees using the correlation coefficient of residuals between Gaussian fitting and the tree canopy shape described in each profile, and (5) k-means segmentation to obtain the point cloud of a single tree. The accuracy was evaluated in terms of correct matching, recall, precision, and F-score in eight plots with different stem densities. Results showed that the proposed method significantly increased ITC detections compared with that of using only the region growing algorithm, where the correct matching rate increased from 73.5% to 86.1%, and the recall value increased from 0.78 to 0.89.

Deadwood mapping is of high relevance for studies on forest biodiversity, forest disturbance, and dynamics. As deadwood predominantly occurs in forests characterized by a high structural complexity and rugged terrain, the use of remote sensing offers numerous advantages over terrestrial inventory. However, deadwood misclassifications can occur in the presence of bare ground, displaying a similar spectral signature. In this study, we tested the potential to detect standing deadwood (h > 5 m) using orthophotos (0.5 m resolution) and digital surface models (DSM) (1 m resolution), both derived from stereo aerial image matching (0.2 m resolution and 60%/30% overlap (end/side lap)). Models were calibrated in a 600 ha mountain forest area that was rich in deadwood in various stages of decay. We employed random forest (RF) classification, followed by two approaches for addressing the deadwood-bare ground misclassification issue: (1) post-processing, with a mean neighborhood filter for “deadwood”-pixels and filtering out isolated pixels and (2) a “deadwood-uncertainty” filter, quantifying the probability of a “deadwood”-pixel to be correctly classified as a function of the environmental and spectral conditions in its neighborhood. RF model validation based on data partitioning delivered high user’s (UA) and producer’s (PA) accuracies (both > 0.9). Independent validation, however, revealed a high commission error for deadwood, mainly in areas with bare ground (UA = 0.60, PA = 0.87). Post-processing (1) and the application of the uncertainty filter (2) improved the distinction between deadwood and bare ground and led to a more balanced relation between UA and PA (UA of 0.69 and 0.74, PA of 0.79 and 0.80, under (1) and (2), respectively). Deadwood-pixels showed 90% location agreement with manually delineated reference to deadwood objects. With both alternative solutions, deadwood mapping achieved reliable results and the highest accuracies were obtained with deadwood-uncertainty filter. Since the information on surface heights was crucial for correct classification, enhancing DSM quality could substantially improve the results.