Youn Jung Choi

Dr. Youn Jung Choi


Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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14 July 2021 in Plants
Verified
Journal Article
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YKYun-Im Kang
Yun-Im Kang
YCYoun Jung Choi
Youn Jung Choi
YLYoung Ran Lee
Young Ran Lee
KSKyung Hye Seo
Kyung Hye Seo
JSJung-Nam Suh
Jung-Nam Suh
HLHye-Rim Lee
Hye-Rim Lee
Salt stress is a major constraint of crop productivity because it reduces yield and limits the expansion of agriculture. This study investigated salt tolerance in 26 cultivars of cut lilies (Lilium hybrids) by examining the effect of salt stress on the growth and morphological characteristics of flowers and leaves and their physiological properties (chlorophyll a fluorescence). Salt stress significantly affected the growth and development of cut lilies. Canonical discriminant analysis indicates that the middle leaf width, number of flowers, first flower diameter, petal width, and chlorophyll a fluorescence were correlated with salt stress, whereas plant height, the middle leaf length, days to flowering, and sepal width were less affected by the stress. The cultivars examined were divided into three groups: Group 1 included the salt-sensitive cultivars, which failed to develop normal flowers; Group 2 included cultivars sensitive to salt stress but tolerant to osmotic stress; and Group 3 was the salt-tolerant group, which developed commercially valuable flowers. In conclusion, the cultivars contained a variable range of cut flower characteristics and growth traits that can be employed for lily breeding programs and as material for molecular mechanisms and signaling networks under salt stress.

17 November 2020 in Plants
Verified
Journal Article
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ASAparna Srinivasan
Aparna Srinivasan
ASAhn Myung Suk
Ahn Myung Suk
GJGyeong Suk Jo
Gyeong Suk Jo
JSJung Nam Suh
Jung Nam Suh
KSKyung Hye Seo
Kyung Hye Seo
YCYoun Jung Choi
Youn Jung Choi
Scent is one of the most important economic traits in Freesia hybrida. “Shiny Gold”, a popular cultivar in South Korea, is widely cultivated for its scent. The relative scent intensity of “Shiny Gold” was approximately 16% higher in full-bloomed flower when compared to the yellow bud stage, while tissue-specifically, tepals showed higher intensity in electronic-nose (e-nose) analysis. E-nose analysis also showed that the scent intensity of “Shiny Gold” was higher and lower than “10C3-424” and “10C3-894”, respectively, and was similar to “Yvonne”. These results correlated to those of the olfactory tests. In total, 19 volatile compounds, including linalool, β-ocimene, D-limonene, trans-β-ionone were detected in gas chromatography–mass spectrometry analysis. Among these, linalool was the major volatile compound, accounting for 38.7% in “Shiny Gold”. Linalool synthase and TPS gene expression corresponded to the scent intensity of the four cultivars, with the lowest expression in the “10C3-424”. TPS 2, TPS 3, TPS 5, TPS 6 and TPS 8 were highly expressed in both bud and flower in “Shiny Gold”, while the expression of TPS 4 was lower, relative to other TPS genes in both the flowering stages. These results may aid in enhancing scent composition in Freesia cultivars using marker-assisted selection.

13 January 2025 in Genes
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Journal Article
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MMManjulatha Mekapogu
Manjulatha Mekapogu
SLSo-Hyeon Lim
So-Hyeon Lim
YCYoun Jung Choi
Youn Jung Choi
SLSu Young Lee
Su Young Lee
JJJae A Jung
Jae A Jung
Background/Objectives: Chrysanthemum (Chrysanthemum morifolium), a key ornamental and medicinal plant, presents challenges in cultivar identification due to high phenotypic similarity and environmental influences. This study assessed the genetic diversity and discrimination of 126 spray-type chrysanthemum cultivars. Methods: About twenty-three simple sequence repeat (SSR) markers were screened for the discrimination of 126 cultivars, among which six SSR markers showed polymorphic fragments. Results: Results showed high polymorphism across six markers, with an average of 3.8 alleles per locus and a mean polymorphism information content (PIC) of 0.52, indicating strong discriminatory efficiency. The average observed heterozygosity (Ho) was 0.72, reflecting significant genetic diversity within the cultivars. Cluster analysis using the unweighted pair group method with arithmetic mean (UPGMA) grouped the cultivars into seven clusters, correlating well with the PCA. Bayesian population structure analysis suggested two primary genetic subpopulations. Conclusions: These findings confirm SSR markers as an effective tool for the genetic characterization and precise discrimination of spray type chrysanthemum cultivars, offering significant applications in breeding, cultivar registration, and germplasm conservation. The SSR marker-based approach thus provides a reliable and efficient strategy to enhance the management and commercialization of diverse chrysanthemum germplasm collections.

3 June 2025 in Euphytica
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Journal Article
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KLKa Youn Lee
Ka Youn Lee
YKYae Jin Kim
Yae Jin Kim
Chang-Ho AhnChang-Ho Ahn
Chang-Ho Ahn
KDKyoung Ran Do
Kyoung Ran Do
YCYoun Jung Choi
Youn Jung Choi
SLSu Young Lee
Su Young Lee
Rose (Rosa hybrida) is an ornamental crop cultivated worldwide for its economic significance. However, rose prickles pose the risk of injury to workers and can negatively affect flower quality. Consequently, there has been a long-standing demand for the development of new rose varieties with small, delicate, and fewer prickles. Searching for the genes involved in prickle formation is required for rapid and efficient breeding. In this study, we identified myeloblastosis (MYB) group transcription factors that are anticipated to be involved in the formation and color change of rose prickles through RNA sequencing. In addition, we aimed to estimate the influence of selected transcription factors on the physiological characteristics of roses and suggest possibilities. Three types of stems of the rose ‘Pink Beauty’ (prickless stems (PL), stems with small prickles (SP), and stems with large prickles (BP)) generated a total of 71,830,230 raw reads. The average number of trimmed reads was 71,200,618, indicating a high quality. Through differentially expression gene (DEG) analysis, we selected DEGs that were upregulated and downregulated in SP and BP compared to those in PL, focusing on the MYB group. Finally, we compared and analyzed the expression levels of seven DEGs (MYB5, WER, ETC3, MYB4, MYB8, MYB6, and MYB14). In particular, MYB5 and WER are expected to play important roles in the regulation of trichome formation, whereas ETC3, MYB4, and MYB8 are anticipated to have an essential influence on prickle development. Additionally, MYB6 and MYB14 are likely to be involved in pigment biosynthesis and regulation of color changes in rose prickles. This study suggests that transcription factors play an important role in the development of rose prickles and contributes to the understanding of the functions of related genes. Data from this study will serve as a foundation for future research on the formation and development mechanisms of prickles.

14 June 2024 in Plants
Verified
Journal Article
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JBJinjoo Bae
Jinjoo Bae
JSJae-Young Song
Jae-Young Song
YLYoung-Yi Lee
Young-Yi Lee
YLYe-Ji Lee
Ye-Ji Lee
YCYoun Jung Choi
Youn Jung Choi
JHJi-Won Han
Ji-Won Han
Cryopreservation is a promising method for the long-term preservation of plant germplasm, especially for vegetatively propagated species like freesias. In this study, we investigate streamlining the cryopreservation process for ‘Sunny Gold’ Freesia, starting from effective in vitro initiation and proliferation using various plant growth regulator combinations. We also assess the impact of subculture on regrowth rates after cryopreservation. The shoot tips were successfully initiated in vitro after sterilization. The shoots were multiplied an average of three times in media containing N6-benzyladenine and kinetin. The regrowth rates of non-cryopreserved shoot tips excised from different subculture cycles did not differ significantly, with rates of 44% observed for plants from more than five subcultures and 47% for those from three subcultures. However, only the shoot tips excised from cultures subjected to three subculture cycles were able to recover after cryopreservation, with a regrowth rate of 31%. Our findings lay the groundwork for the development of an efficient cryopreservation protocol for freesias in the future.

16 October 2025 in Plants
Verified
Journal Article
Open access
PDF file
KLKa Youn Lee
Ka Youn Lee
SLSu Young Lee
Su Young Lee
YKYae Jin Kim
Yae Jin Kim
YCYoun Jung Choi
Youn Jung Choi
SLSo Hyeon Lim
So Hyeon Lim
YKYun-Im Kang
Yun-Im Kang
Roses (Rosa hybrida) are among the most highly valued ornamental plants worldwide, with flower color serving as a major determinant of consumer preference and commercial success. However, the absence of the flavonoid 3′,5′-hydroxylase (F3′5′H) gene limits delphinidin biosynthesis, making it difficult to achieve blue or purple pigmentation. Vacuolar sodium/proton antiporters (NHX) regulate vacuolar pH and are also implicated in color stability. In this study, we introduced Viola tricolor F3′5′H (VtF3′5′H) and Rosa hybrida NHX (RhNHX) into the rose cultivar ‘Red Farm’ using Agrobacterium-mediated transformation. The non-native VtF3′5′H gene was detected in transgenic plants but not in the wild type, while RhNHX expression was relatively higher in transgenic plants. Petal anthocyanin content was significantly increased in T1–T4 compared to the wild type, and petal pH was also higher than that of the wild type. Growth and floral traits were also altered. Transgenic plants exhibited shorter stems, reduced stem diameter, more lateral branches, fewer prickles, and more than threefold higher petal numbers. Expression analysis showed reduced GA20-oxidase (GA20ox1) and GA3-oxidase (GA3ox) levels and increased GA2-oxidase (GA2ox) and GA2-oxidase6 (GA2ox6), particularly in stems, suggesting enhanced gibberellin (GA) inactivation. Overexpression of VtF3′5′H and RhNHX led to simultaneous changes in floral pigmentation and plant morphology. These findings indicate that both genes play functional roles in color development and growth regulation in roses.