Akihiro Kawamoto

Dr. Akihiro Kawamoto

orcid

Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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14 October 2020 in Nature Communications
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DVDavid Vizarraga
David Vizarraga
AKAkihiro Kawamoto
Akihiro Kawamoto
UMU. Matsumoto
U. Matsumoto
RIRamiro Illanes
Ramiro Illanes
RPRosa Pérez-Luque
Rosa Pérez-Luque
DADavid Aparicio
David Aparicio
Mycoplasma pneumoniae is a bacterial human pathogen that causes primary atypical pneumonia. M. pneumoniae motility and infectivity are mediated by the immunodominant proteins P1 and P40/P90, which form a transmembrane adhesion complex. Here we report the structure of P1, determined by X-ray crystallography and cryo-electron microscopy, and the X-ray structure of P40/P90. Contrary to what had been suggested, the binding site for sialic acid was found in P40/P90 and not in P1. Genetic and clinical variability concentrates on the N-terminal domain surfaces of P1 and P40/P90. Polyclonal antibodies generated against the mostly conserved C-terminal domain of P1 inhibited adhesion of M. pneumoniae, and serology assays with sera from infected patients were positive when tested against this C-terminal domain. P40/P90 also showed strong reactivity against human infected sera. The architectural elements determined for P1 and P40/P90 open new possibilities in vaccine development against M. pneumoniae infections.

9 July 2021 in Nature Communications
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AKAkihiro Kawamoto
Akihiro Kawamoto
TMTomoko Miyata
Tomoko Miyata
FMFumiaki Makino
Fumiaki Makino
MKMiki Kinoshita
Miki Kinoshita
Tohru MinaminoTohru Minamino
Tohru Minamino
Keiichi NambaKeiichi Namba
Keiichi Namba
The bacterial flagellar MS ring is a transmembrane complex acting as the core of the flagellar motor and template for flagellar assembly. The C ring attached to the MS ring is involved in torque generation and rotation switch, and a large symmetry mismatch between these two rings has been a long puzzle, especially with respect to their role in motor function. Here, using cryoEM structural analysis of the flagellar basal body and the MS ring formed by full-length FliF from Salmonella enterica, we show that the native MS ring is formed by 34 FliF subunits with no symmetry variation. Symmetry analysis of the C ring shows a variation with a peak at 34-fold, suggesting flexibility in C ring assembly. Finally, our data also indicate that FliF subunits assume two different conformations, contributing differentially to the inner and middle parts of the M ring and thus resulting in 23- and 11-fold subsymmetries in the inner and middle M ring, respectively. The internal core of the M ring, formed by 23 subunits, forms a hole of the right size to accommodate the protein export gate.

4 May 2018 in Science Advances
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HTHajime Tahara
Hajime Tahara
KTKyosuke Takabe
Kyosuke Takabe
YSYuya Sasaki
Yuya Sasaki
KKKie Kasuga
Kie Kasuga
AKAkihiro Kawamoto
Akihiro Kawamoto
Shuichi NakamuraShuichi Nakamura
Shuichi Nakamura
Rotation of a helical cell body and mobility of cell-surface adhesins result in surface motility of the spirochete Leptospira .

8 March 2021 in Communications Biology
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Orkun Mehmet ÇoruhOrkun Mehmet Çoruh
Orkun Mehmet Çoruh
AFAnna Frank
Anna Frank
HTHideaki Tanaka
Hideaki Tanaka
AKAkihiro Kawamoto
Akihiro Kawamoto
EEEithar El-Mohsnawy
Eithar El-Mohsnawy
GKGENJI KURISU
GENJI KURISU
A high-resolution structure of trimeric cyanobacterial Photosystem I (PSI) from Thermosynechococcus elongatus was reported as the first atomic model of PSI almost 20 years ago. However, the monomeric PSI structure has not yet been reported despite long-standing interest in its structure and extensive spectroscopic characterization of the loss of red chlorophylls upon monomerization. Here, we describe the structure of monomeric PSI from Thermosynechococcus elongatus BP-1. Comparison with the trimer structure gave detailed insights into monomerization-induced changes in both the central trimerization domain and the peripheral regions of the complex. Monomerization-induced loss of red chlorophylls is assigned to a cluster of chlorophylls adjacent to PsaX. Based on our findings, we propose a role of PsaX in the stabilization of red chlorophylls and that lipids of the surrounding membrane present a major source of thermal energy for uphill excitation energy transfer from red chlorophylls to P700.

12 September 2022 in Communications Biology
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JLJiannan Li
Jiannan Li
NHNoriyuki Hamaoka
Noriyuki Hamaoka
FMFumiaki Makino
Fumiaki Makino
AKAkihiro Kawamoto
Akihiro Kawamoto
YLYuxi Lin
Yuxi Lin
GKGENJI KURISU
GENJI KURISU
Photosystem I (PSI) is a light driven electron pump transferring electrons from Cytochrome c6 (Cyt c6) to Ferredoxin (Fd). An understanding of this electron transfer process is hampered by a paucity of structural detail concerning PSI:Fd interface and the possible binding sites of Cyt c6. Here we describe the high resolution cryo-EM structure of Thermosynechococcus elongatus BP-1 PSI in complex with Fd and a loosely bound Cyt c6. Side chain interactions at the PSI:Fd interface including bridging water molecules are visualized in detail. The structure explains the properties of mutants of PsaE and PsaC that affect kinetics of Fd binding and suggests a molecular switch for the dissociation of Fd upon reduction. Calorimetry-based thermodynamic analyses confirms a single binding site for Fd and demonstrates that PSI:Fd complexation is purely driven by entropy. A possible reaction cycle for the efficient transfer of electrons from Cyt c6 to Fd via PSI is proposed.

31 August 2021 in mBio
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TTTakuma Toyonaga
Takuma Toyonaga
TKTakayuki Kato
Takayuki Kato
AKAkihiro Kawamoto
Akihiro Kawamoto
NKNoriyuki Kodera
Noriyuki Kodera
THTasuku Hamaguchi
Tasuku Hamaguchi
Makoto MiyataMakoto Miyata
Makoto Miyata
F 1 F o -ATPase, a rotary ATPase, is widespread in the membranes of mitochondria, chloroplasts, and bacteria and converts ATP energy with a proton motive force across the membrane by its physical rotation. Homologous protein complexes play roles in ion and protein transport. Mycoplasma mobile , a pathogenic bacterium, was recently suggested to have a special motility system evolutionarily derived from F 1 -ATPase.