Satellite and airborne optical sensors are increasingly used by scientists, and policy makers, and managers for studying and managing forests, agriculture crops, and urban areas. Their data acquired with given instrumental specifications (spectral resolution, viewing direction, sensor field-of-view, etc.) and for a specific experimental configuration (surface and atmosphere conditions, sun direction, etc.) are commonly translated into qualitative and quantitative Earth surface parameters. However, atmosphere properties and Earth surface 3D architecture often confound their interpretation. Radiative transfer models capable of simulating the Earth and atmosphere complexity are, therefore, ideal tools for linking remotely sensed data to the surface parameters. Still, many existing models are oversimplifying the Earth-atmosphere system interactions and their parameterization of sensor specifications is often neglected or poorly considered. The Discrete Anisotropic Radiative Transfer (DART) model is one of the most comprehensive physically based 3D models simulating the Earth-atmosphere radiation interaction from visible to thermal infrared wavelengths. It has been developed since 1992. It models optical signals at the entrance of imaging radiometers and laser scanners on board of satellites and airplanes, as well as the 3D radiative budget, of urban and natural landscapes for any experimental configuration and instrumental specification. It is freely distributed for research and teaching activities. This paper presents DART physical bases and its latest functionality for simulating imaging spectroscopy of natural and urban landscapes with atmosphere, including the perspective projection of airborne acquisitions and LIght Detection And Ranging (LIDAR) waveform and photon counting signals.

The correction of atmospheric effects is one of the preliminary steps required to make quantitative use of time series of high resolution images from optical remote sensing satellites. An accurate atmospheric correction requires good knowledge of the aerosol optical thickness (AOT) and of the aerosol type. As a first step, this study compares the performances of two kinds of AOT estimation methods applied to FormoSat-2 and LandSat time series of images: a multi-spectral method that assumes a constant relationship between surface reflectance measurements and a multi-temporal method that assumes that the surface reflectances are stable with time. In a second step, these methods are combined to obtain more accurate and robust estimates. The estimated AOTs are compared to in situ measurements on several sites of the AERONET (Aerosol Robotic Network). The methods, based on either spectral or temporal criteria, provide accuracies better than 0.07 in most cases, but show degraded accuracies in some special cases, such as the absence of vegetation for the spectral method or a very quick variation of landscape for the temporal method. The combination of both methods in a new spectro-temporal method increases the robustness of the results in all cases.

Supervised classification systems used for land cover mapping require accurate reference databases. These reference data come generally from different sources such as field measurements, thematic maps, or aerial photographs. Due to misregistration, update delay, or land cover complexity, they may contain class label noise, i.e., a wrong label assignment. This study aims at evaluating the impact of mislabeled training data on classification performances for land cover mapping. Particularly, it addresses the random and systematic label noise problem for the classification of high resolution satellite image time series. Experiments are carried out on synthetic and real datasets with two traditional classifiers: Support Vector Machines (SVM) and Random Forests (RF). A synthetic dataset has been designed for this study, simulating vegetation profiles over one year. The real dataset is composed of Landsat-8 and SPOT-4 images acquired during one year in the south of France. The results show that both classifiers are little influenced for low random noise levels up to 25%–30%, but their performances drop down for higher noise levels. Different classification configurations are tested by increasing the number of classes, using different input feature vectors, and changing the number of training instances. Algorithm complexities are also analyzed. The RF classifier achieves high robustness to random and systematic label noise for all the tested configurations; whereas the SVM classifier is more sensitive to the kernel choice and to the input feature vectors. Finally, this work reveals that the cross-validation procedure is impacted by the presence of class label noise.

Flavescence dorée is a grapevine disease affecting European vineyards which has severe economic consequences and containing its spread is therefore considered as a major challenge for viticulture. Flavescence dorée is subject to mandatory pest control including removal of the infected vines and, in this context, automatic detection of Flavescence dorée symptomatic vines by unmanned aerial vehicle (UAV) remote sensing could constitute a key diagnosis instrument for growers. The objective of this paper is to evaluate the feasibility of discriminating the Flavescence dorée symptoms in red and white cultivars from healthy vine vegetation using UAV multispectral imagery. Exhaustive ground truth data and UAV multispectral imagery (visible and near-infrared domain) have been acquired in September 2015 over four selected vineyards in Southwest France. Spectral signatures of healthy and symptomatic plants were studied with a set of 20 variables computed from the UAV images (spectral bands, vegetation indices and biophysical parameters) using univariate and multivariate classification approaches. Best results were achieved with red cultivars (both using univariate and multivariate approaches). For white cultivars, results were not satisfactory either for the univariate or the multivariate. Nevertheless, external accuracy assessment show that despite problems of Flavescence dorée and healthy pixel misclassification, an operational Flavescence dorée mapping technique using UAV-based imagery can still be proposed.

The exploitation of new high revisit frequency satellite observations is an important opportunity for agricultural applications. The Sentinel-2 for Agriculture project S2Agri (http://www.esa-sen2agri.org/SitePages/Home.aspx) is designed to develop, demonstrate and facilitate the Sentinel-2 time series contribution to the satellite EO component of agriculture monitoring for many agricultural systems across the globe. In the framework of this project, this article studies the construction of a dynamic cropland mask. This mask consists of a binary “annual-cropland/no-annual-cropland” map produced several times during the season to serve as a mask for monitoring crop growing conditions over the growing season. The construction of the mask relies on two classical pattern recognition techniques: feature extraction and classification. One pixel- and two object-based strategies are proposed and compared. A set of 12 test sites are used to benchmark the methods and algorithms with regard to the diversity of the agro-ecological context, landscape patterns, agricultural practices and actual satellite observation conditions. The classification results yield promising accuracies of around 90% at the end of the agricultural season. Efforts will be made to transition this research into operational products once Sentinel-2 data become available.

Among grapevine diseases affecting European vineyards, Flavescence dorée (FD) and Grapevine Trunk Diseases (GTD) are considered the most relevant challenges for viticulture because of the damage they cause to vineyards. Unmanned Aerial Vehicle (UAV) multispectral imagery could be a powerful tool for the automatic detection of symptomatic vines. However, one major difficulty is to discriminate different kinds of diseases leading to similar leaves discoloration as it is the case with FD and GTD for red vine cultivars. The objective of this paper is to evaluate the potentiality of UAV multispectral imagery to separate: symptomatic vines including FD and GTD (Esca and black dead arm) from asymptomatic vines (Case 1) and FD vines from GTD ones (Case 2). The study sites are localized in the Gaillac and Minervois wine production regions (south of France). A set of seven vineyards covering five different red cultivars was studied. Field work was carried out between August and September 2016. In total, 218 asymptomatic vines, 502 FD vines and 199 GTD vines were located with a centimetric precision GPS. UAV multispectral images were acquired with a MicaSense RedEdge^® sensor and were processed to ultimately obtain surface reflectance mosaics at 0.10 m ground spatial resolution. In this study, the potentiality of 24 variables (5 spectral bands, 15 vegetation indices and 4 biophysical parameters) are tested. The vegetation indices are selected for their potentiality to detect abnormal vegetation behavior in relation to stress or diseases. Among the biophysical parameters selected, three are directly linked to the leaf pigments content (chlorophyll, carotenoid and anthocyanin). The first step consisted in evaluating the performance of the 24 variables to separate symptomatic vine vegetation (FD or/and GTD) from asymptomatic vine vegetation using the performance indicators from the Receiver Operator Characteristic (ROC) Curve method (i.e., Area Under Curve or AUC, sensibility and specificity). The second step consisted in mapping the symptomatic vines (FD and/or GTD) at the scale of the field using the optimal threshold resulting from the ROC curve. Ultimately, the error between the level of infection predicted by the selected variables (proportion of symptomatic pixels by vine) and observed in the field (proportion of symptomatic leaves by vine) is calculated. The same methodology is applied to the three levels of analysis: by vineyard, by cultivar (Gamay, Fer Servadou) and by berry color (all red cultivars). At the vineyard and cultivar levels, the best variables selected varies. The AUC of the best vegetation indices and biophysical parameters varies from 0.84 to 0.95 for Case 1 and 0.74 to 0.90 for Case 2. At the berry color level, no variable is efficient in discriminating FD vines from GTD ones (Case 2). For Case 1, the best vegetation indices and biophysical parameter are Red Green Index (RGI)/ Green-Red Vegetation Index (GRVI) (based on the green and red spectral bands) and Car (linked to carotenoid content). These variables are more effective in mapping vines with a level of infection greater than 50%. However, at the scale of the field, we observe misclassified pixels linked to the presence of mixed pixels (shade, bare soil, inter-row vegetation and vine vegetation) and other factors of abnormal coloration (e.g., apoplectic vines).