IRENE LIPARULO

Dr. IRENE LIPARULO

Nutritional Sciences and Toxicology, University of California, Berkeley, Berkeley, California, USA
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Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 April 2021 in Brain
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EBElena Bonora
Elena Bonora
Sanjiban ChakrabartySanjiban Chakrabarty
Sanjiban Chakrabarty
GKGeorgios Kellaris
Georgios Kellaris
MTMakiko Tsutsumi
Makiko Tsutsumi
FBFrancesca Bianco
Francesca Bianco
Roberto De GiorgioRoberto De Giorgio
Roberto De Giorgio
Abnormal gut motility is a feature of several mitochondrial encephalomyopathies, and mutations in genes such as TYMP and POLG, have been linked to these rare diseases. The human genome encodes three DNA ligases, of which only one, ligase III (LIG3), has a mitochondrial splice variant and is crucial for mitochondrial health. We investigated the effect of reduced LIG3 activity and resulting mitochondrial dysfunction in seven patients from three independent families, who showed the common occurrence of gut dysmotility and neurological manifestations reminiscent of mitochondrial neurogastrointestinal encephalomyopathy. DNA from these patients was subjected to whole exome sequencing. In all patients, compound heterozygous variants in a new disease gene, LIG3, were identified. All variants were predicted to have a damaging effect on the protein. The LIG3 gene encodes the only mitochondrial DNA (mtDNA) ligase and therefore plays a pivotal role in mtDNA repair and replication. In vitro assays in patient-derived cells showed a decrease in LIG3 protein levels and ligase activity. We demonstrated that the LIG3 gene defects affect mtDNA maintenance, leading to mtDNA depletion without the accumulation of multiple deletions as observed in other mitochondrial disorders. This mitochondrial dysfunction is likely to cause the phenotypes observed in these patients. The most prominent and consistent clinical signs were severe gut dysmotility and neurological abnormalities, including leukoencephalopathy, epilepsy, migraine, stroke-like episodes, and neurogenic bladder. A decrease in the number of myenteric neurons, and increased fibrosis and elastin levels were the most prominent changes in the gut. Cytochrome c oxidase (COX) deficient fibres in skeletal muscle were also observed. Disruption of lig3 in zebrafish reproduced the brain alterations and impaired gut transit in vivo. In conclusion, we identified variants in the LIG3 gene that result in a mitochondrial disease characterized by predominant gut dysmotility, encephalopathy, and neuromuscular abnormalities.

7 June 2021 in Antioxidants
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NRNicola Rizzardi
Nicola Rizzardi
ILIRENE LIPARULO
IRENE LIPARULO
GAGiorgia Antonelli
Giorgia Antonelli
FOFrancesca Orsini
Francesca Orsini
ARAntonella Riva
Antonella Riva
RFRomana Fato
Romana Fato
Coenzyme Q10 (CoQ10) is a lipid-soluble molecule with a dual role: it transfers electrons in the mitochondrial transport chain by promoting the transmembrane potential exploited by the ATPase to synthesize ATP and, in its reduced form, is a membrane antioxidant. Since the high CoQ10 hydrophobicity hinders its bioavailability, several formulations have been developed to facilitate its cellular uptake. In this work, we studied the bioenergetic and antioxidant effects in I407 and H9c2 cells of a CoQ10 phytosome formulation (UBIQSOME®, UBQ). We investigated the cellular and mitochondrial content of CoQ10 and its redox state after incubation with UBQ. We studied different bioenergetic parameters, such as oxygen consumption, ATP content and mitochondrial potential. Moreover, we evaluated the effects of CoQ10 incubation on oxidative stress, membrane lipid peroxidation and ferroptosis and highlighted the connection between the intracellular concentration of CoQ10 and its antioxidant potency. Finally, we focused on the cellular mechanism that regulates UBQ internalization. We showed that the cell lines used in this work share the same uptake mechanism for UBQ, although the intestinal cell line was less efficient. Given the limitations of an in vitro model, the latter result supports that intestinal absorption is a critical step for the oral administration of Coenzyme Q10 formulations.

8 September 2025 in The EMBO Journal
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Open access
Amanda L GunawanAmanda L Gunawan
Amanda L Gunawan
ILIRENE LIPARULO
IRENE LIPARULO
ASAndreas Stahl
Andreas Stahl
A variety of stressors, including environmental insults, pathological conditions, and transition states, constantly challenge cells that, in turn, activate adaptive responses to maintain homeostasis. Mitochondria have pivotal roles in orchestrating these responses that influence not only cellular energy production but also broader physiological processes. Mitochondria contribute to stress adaptation through mechanisms including induction of the mitochondrial unfolded protein response (UPR mt ) and the integrated stress response (ISR). These responses are essential for managing mitochondrial proteostasis and restoring cellular function, with each being tailored to specific stressors and cellular milieus. While excessive stress can lead to maladaptive responses, mitohormesis refers to the beneficial effects of low-level mitochondrial stress. Initially studied in invertebrates and cell cultures, recent research has expanded to mammalian models of mitohormesis. In this literature review, we describe the current landscape of mammalian mitohormesis research and identify mechanistic patterns that result in local, systemic, or interorgan mitohormesis. These investigations reveal the potential for targeting mitohormesis for therapeutic benefit and can transform the treatment of diseases commonly associated with mitochondrial stress in humans.

5 March 2025 in Nature
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LCLaetitia Coassolo
Laetitia Coassolo
NDNiels B. Danneskiold-Samsøe
Niels B. Danneskiold-Samsøe
QNQuennie Nguyen
Quennie Nguyen
AWAmanda Wiggenhorn
Amanda Wiggenhorn
MZMeng Zhao
Meng Zhao
KSKatrin J. Svensson
Katrin J. Svensson

8 September 2020 in The FEBS Journal
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ILIRENE LIPARULO
IRENE LIPARULO
christian bergaminichristian bergamini
christian bergamini
MBMarco Bortolus
Marco Bortolus
NCNatalia Calonghi
Natalia Calonghi
GGGiuseppe Gasparre
Giuseppe Gasparre
RFRomana Fato
Romana Fato
Coenzyme Q10 (CoQ, ubiquinone) is a redox‐active lipid endogenously synthesized by the cells. The final stage of CoQ biosynthesis is performed at the mitochondrial level by the ‘complex Q’, where coq2 is responsible for the prenylation of the benzoquinone ring of the molecule. We report that the competitive coq2 inhibitor 4‐nitrobenzoate (4‐NB) decreased the cellular CoQ content and caused severe impairment of mitochondrial function in the T67 human glioma cell line. In parallel with the reduction in CoQ biosynthesis, the cholesterol level increased, leading to significant perturbation of the plasma membrane physicochemical properties. We show that 4‐NB treatment did not significantly affect the cell viability, because of an adaptive metabolic rewiring toward glycolysis. Hypoxia‐inducible factor 1α (HIF‐1α) stabilization was detected in 4‐NB‐treated cells, possibly due to the contribution of both reduction in intracellular oxygen tension and ROS overproduction. Exogenous CoQ supplementation partially recovered cholesterol content, HIF‐1α degradation, and ROS production, whereas only weakly improved the bioenergetic impairment induced by the CoQ depletion. Our data provide new insights on the effect of CoQ depletion and contribute to shed light on the pathogenic mechanisms of ubiquinone deficiency syndrome.

1 November 2019 in European Journal of Medicinal Chemistry
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Journal Article
Closed access
CLCaroline Lanthier
Caroline Lanthier
HPHugo Payan
Hugo Payan
ILIRENE LIPARULO
IRENE LIPARULO
BHBérénice Hatat
Bérénice Hatat
CLCédric Lecoutey
Cédric Lecoutey
CRChristophe Rochais
Christophe Rochais