shan jin

Dr. shan jin


Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 May 2021 in Genomics
Verified
Journal Article
Closed access
XCXuejin Chen
Xuejin Chen
PWPengjie Wang
Pengjie Wang
MGMengya Gu
Mengya Gu
XLXinying Lin
Xinying Lin
BHBinghao Hou
Binghao Hou
NYNaixing Ye
Naixing Ye

Verified
Journal Article
Open access
PDF file
XCXuejin Chen
Xuejin Chen
PWPengjie Wang
Pengjie Wang
YZYucheng Zheng
Yucheng Zheng
MGMengya Gu
Mengya Gu
XLXinying Lin
Xinying Lin
NYNaixing Ye
Naixing Ye
Purple-leaf tea is a phenotype with unique color because of its high anthocyanin content. The special flavor of purple-leaf tea is highly different from that of green-leaf tea, and its main ingredient is also of economic value. To probe the genetic mechanism of the phenotypic characteristics of tea leaf color, we conducted widely targeted metabolic and transcriptomic profiling. The metabolites in the flavonoid biosynthetic pathway of purple- and green-leaf tea were compared, and results showed that phenolic compounds, including phenolic acids, flavonoids, and tannins, accumulated in purple-leaf tea. The high expression of genes related to flavonoid biosynthesis (e.g., PAL and LAR) exhibits the specific expression of biosynthesis and the accumulation of these metabolites. Our result also shows that two CsUFGTs were positively related to the accumulation of anthocyanin. Moreover, genes encoding transcription factors that regulate flavonoids were identified by coexpression analysis. These results may help to identify the metabolic factors that influence leaf color differentiation and provide reference for future research on leaf color biology and the genetic improvement of tea.

18 February 2020 in Forests
Verified
Journal Article
Open access
PDF file
PWPengjie Wang
Pengjie Wang
YZYucheng Zheng
Yucheng Zheng
YGYongchun Guo
Yongchun Guo
BLBaoshun Liu
Baoshun Liu
SJshan jin
shan jin
NYNaixing Ye
Naixing Ye
Albino tea mutants with specific shoot colors (white or yellow) have received increasing attention from researchers due to their unique phenotypes, beneficial metabolites, and special flavor. In this study, novel natural yellow leaf mutants of the same genetic background of “Rougui” were obtained, and the transcriptome and metabolite profiles of the yellow leaf mutant (YR) and original green cultivar (GR) were investigated. A total of 130 significantly changed metabolites (SCMs) and 55 differentially expressed genes (DEGs) were identified in YR compared to GR. The leaf coloration of YR was primarily affected by pigment metabolism including of chlorophyll, carotenoids, and flavonoids, and the co-expression of three heat shock proteins (HSPs) and four heat shock transcription factors (HSFs) may also regulate leaf coloration by affecting chloroplast biogenesis. Of the 130 SCMs, 103 showed clearly increased abundance in YR, especially nucleotides and amino acids and their derivatives and flavonoids, suggesting that YR may be an ideal albino tea germplasm for planting and breeding. Our results may help to characterize the leaf coloration and metabolic mechanism of albino tea germplasm.

24 May 2022 in Foods
Verified
Journal Article
Open access
PDF file
LZLin Zeng
Lin Zeng
YFYanqing Fu
Yanqing Fu
JHJinshui Huang
Jinshui Huang
JWJianren Wang
Jianren Wang
SJshan jin
shan jin
Yongquan XuYongquan Xu
Yongquan Xu
Tieguanyin (TGY) is one kind of oolong tea that is widely appreciated for its aroma and taste. To study the difference of volatile compounds among different types of TGY and other oolong teas, solid-phase microextraction–gas chromatography–mass spectrometry and chemometrics analysis were conducted in this experiment. Based on variable importance in projection > 1 and aroma character impact > 1, the contents of heptanal (1.60–2.79 μg/L), (E,E)-2,4-heptadienal (34.15–70.68 μg/L), (E)-2-octenal (1.57–2.94 μg/L), indole (48.44–122.21 μg/L), and (E)-nerolidol (32.64–96.63 μg/L) in TGY were higher than in other varieties. With the increase in tea fermentation, the total content of volatile compounds decreased slightly, mainly losing floral compounds. Heavily fermented tea contained a higher content of monoterpenoids, whereas low-fermentation tea contained higher contents of sesquiterpenes and indole, which could well distinguish the degree of TGY fermentation. Besides, the volatiles analysis of different grades of TGY showed that the special-grade tea contained more aroma compounds, mainly alcohols (28%). (E,E)-2,4-Heptadienal, (E)-2-octenal, benzeneacetaldehyde, and (E)-nerolidol were the key volatile compounds to distinguish different grades of TGY. The results obtained in this study could help enrich the theoretical basis of aroma substances in TGY.

17 December 2021 in Journal of the Science of Food and Agriculture
Verified
Journal Article
Closed access
PDF file
XCXuejin Chen
Xuejin Chen
PWPengjie Wang
Pengjie Wang
MWMingxiu Wei
Mingxiu Wei
XLXinying Lin
Xinying Lin
MGMengya Gu
Mengya Gu
NYNaixing Ye
Naixing Ye

Verified
Journal Article
Open access
PDF file
PWPengjie Wang
Pengjie Wang
DCDi Chen
Di Chen
YZYucheng Zheng
Yucheng Zheng
SJshan jin
shan jin
JYJiangfan Yang
Jiangfan Yang
NYNaixing Ye
Naixing Ye
The SQUAMOSA promoter binding protein (SBP)-box gene family is a plant-specific transcription factor family. This family plays a crucial role in plant growth and development. In this study, 20 SBP-box genes were identified in the tea plant genome and classified into six groups. The genes in each group shared similar exon-intron structures and motif positions. Expression pattern analyses in five different tissues demonstrated that expression in the buds and leaves was higher than that in other tissues. The cis-elements and expression patterns of the CsSBP genes suggested that the CsSBP genes play active roles in abiotic stress responses; these responses may depend on the abscisic acid (ABA), gibberellic acid (GA), and methyl jasmonate (MeJA) signaling pathways. Our work provides a comprehensive understanding of the CsSBP family and will aid in genetically improving tea plants.