Suyeon Kim

Dr. Suyeon Kim


Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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10 January 2017 in Parasites & Vectors
Verified
Journal Article
Open access
PDF file
YNYoontae Noh
Yoontae Noh
YLYeong Seon Lee
Yeong Seon Lee
HKHeung-Chul Kim
Heung-Chul Kim
SCSung-Tae Chong
Sung-Tae Chong
TKTerry Allen Klein
Terry Allen Klein
SKSuyeon Kim
Suyeon Kim
Rickettsiae constitute a group of arthropod-borne, Gram-negative, obligate intracellular bacteria that are the causative agents of diseases ranging from mild to life threatening that impact on medical and veterinary health worldwide. A total of 6,484 ticks were collected by tick drag from June-October 2013 in the southwestern provinces of the Republic of Korea (ROK) (Jeollanam, n = 3,995; Jeollabuk, n = 680; Chungcheongnam, n = 1,478; and Chungcheongbuk, n = 331). Ticks were sorted into 311 pools according to species, collection site, and stage of development. DNA preparations of tick pools were assayed for rickettsiae by 17 kDa antigen gene and ompA nested PCR (nPCR) assays and the resulting amplicons sequenced to determine the identity and prevalence of spotted fever group rickettsiae (SFGR). Haemaphysalis longicornis (4,471; 52 adults, 123 nymphs and 4,296 larvae) were the most commonly collected ticks, followed by Haemaphysalis flava (1,582; 28 adults, 263 nymphs and 1,291 larvae), and Ixodes nipponensis (431; 25 adults, 5 nymphs and 401 larvae). The minimum field infection rate/100 ticks (assuming 1 positive tick/pool) was 0.93% for the 17 kDa antigen gene and 0.82% for the ompA nPCR assays. The partial 17 kDa antigen and ompA gene sequences from positive pools of H. longicornis were similar to: Rickettsia sp. HI550 (99.4–100%), Rickettsia sp. FUJ98 (99.3–100%), Rickettsia sp. HIR/D91 (99.3–100%), and R. japonica (99.7%). One sequence of the partial 17 kDa antigen gene for H. flava was similar to Rickettsia sp. 17kd-005 (99.7%), while seven sequences of the 17 kDa antigen gene obtained from I. nipponensis ticks were similar to R. monacensis IrR/Munich (98.7–100%) and Rickettsia sp. IRS3 (98.9%). SFG rickettsiae were detected in three species of ixodid ticks collected in the southwestern provinces of the ROK during 2013. A number of rickettsiae have been recently reported from ticks in Korea, some of which were identified as medically important. Results from this study and previous reports demonstrate the need to conduct longitudinal investigations to identify tick-borne rickettsiae and better understand their geographical distributions and potential impact on medical and veterinary health, in addition to risk communication and development of rickettsial disease prevention strategies.

28 October 2015 in Scientific Reports
Verified
Journal Article
Open access
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JHJae Wook Hyeon
Jae Wook Hyeon
SKSuyeon Kim
Suyeon Kim
JLJeongmin Lee
Jeongmin Lee
JPJun Sun Park
Jun Sun Park
KHKyu Jam Hwang
Kyu Jam Hwang
YJYoung Ran Ju
Young Ran Ju
The 14-3-3 protein has been used as a biomarker for the diagnosis of sporadic Creutzfeldt-Jakob disease (sCJD). However, weakly positive 14-3-3 leads to false positive results and an incorrect diagnosis. We attempted to use quantitative data for tau protein to provide an accurate diagnosis based on weak 14-3-3 protein. Sixty-two patients with sCJD, including pathologically confirmed, clinically definite and probable cases and 89 non-CJD patients were investigated based on a Korean population. Among them, 20 sCJD and 14 non-CJD showed weakly positive 14-3-3. The total tau (t-tau) and phosphorylated tau (p-tau) protein levels were measured by ELISA and the p-tau to t-tau ratio (p/t ratio) was calculated. The combined use of the 14-3-3 protein assay, t-tau levels and p/t ratio improved the specificity of diagnosis compared with the use of the 14-3-3 protein assay alone (47% for 14-3-3 alone; 85.94% for 14-3-3 combined with t-tau; 90.62% for 14-3-3 combined with the p/t ratio). In addition, 18 of 20 sCJD and 12 of 14 non-CJD who were weakly positive for 14-3-3 were positive for the p/t ratio and negative for the p/t ratio, respectively. When used in combination with the 14-3-3 protein, the tau protein is useful as a biomarker for the precise diagnosis of sCJD.

22 August 2014 in BMC Medical Genomics
Verified
Journal Article
Open access
PDF file
SLSol Moe Lee
Sol Moe Lee
MCMyungguen Chung
Myungguen Chung
KHKyu Jam Hwang
Kyu Jam Hwang
YJYoung Ran Ju
Young Ran Ju
JHJae Wook Hyeon
Jae Wook Hyeon
SKSuyeon Kim
Suyeon Kim
Human prion diseases are caused by abnormal accumulation of misfolded prion protein in the brain tissue. Inherited prion diseases, including familial Creutzfeldt-Jakob disease (fCJD), are associated with mutations of the prion protein gene (PRNP). The glutamate (E)-to-lysine (K) substitution at codon 200 (E200K) in PRNP is the most common pathogenic mutation causing fCJD, but the E200K pathogenic mutation alone is regarded insufficient to cause prion diseases; thus, additional unidentified factors are proposed to explain the penetrance of E200K-dependent fCJD. Here, exome differences and biological network analysis between fCJD patients with E200K and healthy individuals, including a non-CJD individual with E200K, were analysed to gain new insights into possible mechanisms for CJD in individuals carrying E200K.

24 June 2016 in PLOS ONE
Verified
Journal Article
Open access
PDF file
SLSol Moe Lee
Sol Moe Lee
MCMyungguen Chung
Myungguen Chung
JHJae Wook Hyeon
Jae Wook Hyeon
SJSeok Won Jeong
Seok Won Jeong
YJYoung Ran Ju
Young Ran Ju
SKSuyeon Kim
Suyeon Kim
Inherited prion diseases (IPDs), including genetic Creutzfeldt-Jakob disease (gCJD), account for 10–15% of cases of prion diseases and are associated with several pathogenic mutations, including P102L, V180I, and E200K, in the prion protein gene (PRNP). The valine to isoleucine substitution at codon 180 (V180I) of PRNP is the most common pathogenic mutation causing gCJD in East Asian patients. In this study, we conducted follow-up analyses to identify candidate factors and their associations with disease onset. Whole-genome sequencing (WGS) data of five gCJD patients with V180I mutation and 145 healthy individuals were used to identify genomic differences. A total of 18,648,850 candidate variants were observed in only the patient group, 29 of them were validated as variants. Four of these validated variants were nonsense mutations, six were observed in genes directly or indirectly related to neurodegenerative disorders (NDs), such as LPA, LRRK2, and FGF20. More than half of validated variants were categorized in Gene Ontology (GO) terms of binding and/or catalytic activity. Moreover, we found differential genome variants in gCJD patients with V180I mutation, including one uniquely surviving 10 years after diagnosis of the disease. Elucidation of the relationships between gCJD and Alzheimer’s disease or Parkinson’s disease at the genomic level will facilitate further advances in our understanding of the specific mechanisms mediating the pathogenesis of NDs and gold standard therapies for NDs.

1 January 2019 in Prion
Verified
Journal Article
Open access
SLSol Moe Lee
Sol Moe Lee
SKSung Soon Kim
Sung Soon Kim
HKHeebal Kim
Heebal Kim
SKSuyeon Kim
Suyeon Kim
(2019). THERPA v2: an update of a small molecule database related to prion protein regulation and prion disease progression. Prion: Vol. 13, No. 1, pp. 197-198.

1 February 2016 in Journal of Virological Methods
Verified
Journal Article
Closed access
JPJun-Sun Park
Jun-Sun Park
JUJihye Um
Jihye Um
YCYoung-Ki Choi
Young-Ki Choi
YLYeong Seon Lee
Yeong Seon Lee
YJYoung Ran Ju
Young Ran Ju
SKSuyeon Kim
Suyeon Kim