Johannes Hagemann

Dr. Johannes Hagemann

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Research Focus & Metrics

Academic Career Length

37Years (1990-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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14 April 2020 in Journal of Synchrotron Radiation
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Journal Article
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LLLeon M. Lohse
Leon M. Lohse
ARAnna-Lena Robisch
Anna-Lena Robisch
MTMareike Töpperwien
Mareike Töpperwien
SMSimon Maretzke
Simon Maretzke
MKMartin Krenkel
Martin Krenkel
TSTim Salditt
Tim Salditt
Propagation-based phase-contrast X-ray imaging is by now a well established imaging technique, which – as a full-field technique – is particularly useful for tomography applications. Since it can be implemented with synchrotron radiation and at laboratory micro-focus sources, it covers a wide range of applications. A limiting factor in its development has been the phase-retrieval step, which was often performed using methods with a limited regime of applicability, typically based on linearization. In this work, a much larger set of algorithms, which covers a wide range of cases (experimental parameters, objects and constraints), is compiled into a single toolbox – the HoloTomoToolbox – which is made publicly available. Importantly, the unified structure of the implemented phase-retrieval functions facilitates their use and performance test on different experimental data.

8 June 2021 in Nature Communications
Verified
Journal Article
Open access
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MVM. Vassholz
M. Vassholz
HHH. P. Hoeppe
H. P. Hoeppe
JHJohannes Hagemann
Johannes Hagemann
JRJ. M. Rosselló
J. M. Rosselló
MOM. Osterhoff
M. Osterhoff
TST. Salditt
T. Salditt
Cavitation bubbles can be seeded from a plasma following optical breakdown, by focusing an intense laser in water. The fast dynamics are associated with extreme states of gas and liquid, especially in the nascent state. This offers a unique setting to probe water and water vapor far-from equilibrium. However, current optical techniques cannot quantify these early states due to contrast and resolution limitations. X-ray holography with single X-ray free-electron laser pulses has now enabled a quasi-instantaneous high resolution structural probe with contrast proportional to the electron density of the object. In this work, we demonstrate cone-beam holographic flash imaging of laser-induced cavitation bubbles in water with nanofocused X-ray free-electron laser pulses. We quantify the spatial and temporal pressure distribution of the shockwave surrounding the expanding cavitation bubble at time delays shortly after seeding and compare the results to numerical simulations.

1 January 2021 in Journal of Synchrotron Radiation
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Journal Article
Open access
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JHJohannes Hagemann
Johannes Hagemann
MVMalte Vassholz
Malte Vassholz
HHHannes Hoeppe
Hannes Hoeppe
MOMarkus Osterhoff
Markus Osterhoff
JRJuan M. Rosselló
Juan M. Rosselló
TSTim Salditt
Tim Salditt
X-ray free-electron lasers (XFELs) have opened up unprecedented opportunities for time-resolved nano-scale imaging with X-rays. Near-field propagation-based imaging, and in particular near-field holography (NFH) in its high-resolution implementation in cone-beam geometry, can offer full-field views of a specimen's dynamics captured by single XFEL pulses. To exploit this capability, for example in optical-pump/X-ray-probe imaging schemes, the stochastic nature of the self-amplified spontaneous emission pulses, i.e. the dynamics of the beam itself, presents a major challenge. In this work, a concept is presented to address the fluctuating illumination wavefronts by sampling the configuration space of SASE pulses before an actual recording, followed by a principal component analysis. This scheme is implemented at the MID (Materials Imaging and Dynamics) instrument of the European XFEL and time-resolved NFH is performed using aberration-corrected nano-focusing compound refractive lenses. Specifically, the dynamics of a micro-fluidic water-jet, which is commonly used as sample delivery system at XFELs, is imaged. The jet exhibits rich dynamics of droplet formation in the break-up regime. Moreover, pump–probe imaging is demonstrated using an infrared pulsed laser to induce cavitation and explosion of the jet.

9 March 2022 in Optica
Verified
Journal Article
Closed access
FWFelix Wittwer
Felix Wittwer
JHJohannes Hagemann
Johannes Hagemann
DBDennis Brückner
Dennis Brückner
SFSilja Flenner
Silja Flenner
CSChristian G. Schroer
Christian G. Schroer
The interaction of an object with a coherent probe often encodes its properties in a complex-valued function, which is then detected in an intensity-only measurement. Phase retrieval methods commonly infer this complex-valued function from the intensity. However, the decoding of the object from the complex-valued function often involves some ambiguity in the phase, e.g., when the phase shift in the object exceeds 2 π . Here, we present a phase retrieval framework to directly recover the amplitude and phase of the object. This refractive framework is straightforward to integrate into existing algorithms. As examples, we introduce refractive algorithms for ptychography and near-field holography and demonstrate this method using measured data.

6 May 2014 in Optics Express
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Journal Article
Open access
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JHJohannes Hagemann
Johannes Hagemann
ARA.-L. Robisch
A.-L. Robisch
DLD. R. Luke
D. R. Luke
CHC. Homann
C. Homann
THT. Hohage
T. Hohage
TST. Salditt
T. Salditt
We illustrate the errors inherent in the conventional empty beam correction of full field X-ray propagation imaging, i.e. the division of intensities in the detection plane measured with an object in the beam by the intensity pattern measured without the object, i.e. the empty beam intensity pattern. The error of this conventional approximation is controlled by the ratio of the source size to the smallest feature in the object, as is shown by numerical simulation. In a second step, we investigate how to overcome the flawed empty beam division by simultaneous reconstruction of the probing wavefront (probe) and of the object, based on measurements in several detection planes (multi-projection approach). The algorithmic scheme is demonstrated numerically and experimentally, using the defocus wavefront of the hard X-ray nanoprobe setup at the European Synchrotron Radiation Facility (ESRF).

30 November 2020 in Optics Express
Verified
Journal Article
Open access
SFSilja Flenner
Silja Flenner
AKAdam Kubec
Adam Kubec
CDChristian David
Christian David
MSMalte Storm
Malte Storm
CSClemens F. Schaber
Clemens F. Schaber
JHJohannes Hagemann
Johannes Hagemann
X-ray phase contrast nanotomography enables imaging of a wide range of samples with high spatial resolution in 3D. Near-field holography, as one of the major phase contrast techniques, is often implemented using X-ray optics such as Kirkpatrick-Baez mirrors, waveguides and compound refractive lenses. However, these optics are often tailor-made for a specific beamline and challenging to implement and align. Here, we present a near-field holography setup based on Fresnel zone plates which is fast and easy to align and provides a smooth illumination and flat field. The imaging quality of different types of Fresnel zone plates is compared in terms of the flat-field quality, the achievable resolution and exposure efficiency i.e. the photons arriving at the detector. Overall, this setup is capable of imaging different types of samples at high spatial resolution of below 100 nm in 3D with access to the quantitative phase information.