Panthera tigris is a top predator that maintains the integrity of forest ecosystems and is an integral part of biodiversity. No more than 400 Amur tigers (P. t. altaica) are left in the wild, whereas the South China tiger (P. t. amoyensis) is thought to be extinct in the wild, and molecular biology has been widely used in conservation and management. In this study, the genetic information of Amur tigers and South China tigers was studied by whole-genome sequencing (WGS). A total of 647 Gb of high-quality clean data was obtained. There were 6.3 million high-quality single-nucleotide polymorphisms (SNPs), among which most (66.3%) were located in intergenic regions, with an average of 31.72% located in coding sequences. There were 1.73 million insertion-deletions (InDels), among which there were 2438 InDels (0.10%) in the coding region, and 270 thousand copy number variations (CNVs). Significant genetic differences were found between the Amur tiger and the South China tiger based on a principal component analysis and phylogenetic tree. The linkage disequilibrium analysis showed that the linkage disequilibrium attenuation distance of the South China tiger and the Amur tiger was almost the same, whereas the r² of the South China tiger was 0.6, and the r² of the Amur tiger was 0.4. We identified functional genes and regulatory pathways related to reproduction, disease, predation, and metabolism and characterized functional genes related to survival in the wild, such as smell, vision, muscle, and predatory ability. The data also provide new evidence for the adaptation of Amur tigers to cold environments. PRKG1 is involved in temperature regulation in a cold climate. FOXO1 and TPM4 regulate body temperature to keep it constant. Our results can provide genetic support for precise interspecies conservation and management planning in the future.

Livestock herding is a vital practice in Balochistan, contributing to the economy and culture. The livestock sector is significant in Balochistan, providing 20% of the national stock. Large predators and their prey species, including livestock, have coexisted in these mountainous landscapes for centuries. The aim of the present research is to investigate the impacts of livestock depredation by large predators on livelihoods and predator conservation in two districts of Balochistan, Pakistan. A human–carnivore conflict survey was conducted from July to September 2019, collecting data from 311 residents in a selected study area. Large predators in the study area preyed on a total of 876 livestock during a one-year period, including 560 goats, 292 sheep, 19 cows, and 5 donkeys. The gray wolf is the leading predator, responsible for 66.3% of livestock depredation, followed by the caracal (24.3%), Asiatic jackal (8.9%), and striped hyena (0.6%). The total economic loss was USD 78,694. Overall, 80% of respondents had a negative perception of wolves compared to 24.4% for caracals. Only 20.6% of respondents knew about the importance of conserving carnivores. Livestock depredation by carnivores in the study area created a negative perception of these animals among people. There is a lack of awareness about the importance of conserving carnivore species and their role in the ecosystem. This lack of understanding has ultimately led to detrimental effects on predator populations. It is imperative to raise awareness among people about the ecological significance of carnivores through community meetings, seminars in educational institutions, and providing basic education to herders about effective livestock guarding practices.

Climate change is becoming an important driver of biodiversity loss by altering the habitat, distribution and interspecific relationships of species. Japanese yew (Taxus cuspidata) is a first class protected plant in China, which has important ecological significance and occupies a certain position in the feeding habit of wapiti (Cervus elaphus) and Siberian roe deer (Capreolus pygargus). Due to human and animal damage, the number of Japanese yew has gradually decreased. Therefore, understanding the potential distribution of Japanese yew and the suitable areas for deer to browse on it under climate change will help to further protect these three species in Northeast China, especially migrate to more suitable areas in different scenarios in the future. From July 2021 to July 2024, we collected the information of species distribution and the variables associated with the species’ ecological limits in Muling National Nature Reserve to cross-reflect the current and future distribution and feeding area of the two species to assess each other’s impacts with Maximum entropy model (MaxEnt). The results showed that under the SSP2-4.5 and SSP5-8.5 scenarios, feeding pressure, driest quarter precipitation (BIO17) and seasonal temperature variation coefficient (BIO4) were the main variables affecting the distribution of Japanese yew, and the driest quarter precipitation (BIO17) and annual precipitation (BIO12) were the main variables affecting wapiti and Siberian roe deer foraging them. Under SSP2-4.5 and SSP5-8.5 scenarios, the suitable area of Japanese yew and the feeding area of the two species of deer gradually decreased from 2041 to 2100. Compared with wapiti, Siberian roe deer has a greater impact on the distribution range of Japanese yew, and the suitable feeding area is wider. It is expected that the potential centroid of Japanese yew, wapiti and Siberian roe deer will migrate to higher latitudes in the future. These findings provide a scientific basis for the reserve to develop relevant measures and plans and effectively protect the three species.

The Helan Mountains, situated in the heart of the desert, act as a dividing line between China’s arid and semi-arid zones. Often referred to as a “desert oasis”, they create an ecological island with a uniquely distinctive geographical location, making this area a focal point of contemporary research. Ungulates play a critical role in this ecosystem. The Alashan wapiti (Cervus canadensis alashanicus), an isolated population of China’s smallest wapiti (Cervus canadensis) subspecies, is found exclusively within the Helan Mountains Nature Reserve. The conservation of this isolated population is fraught with challenges, particularly during winter, the harshest season for northern ungulates. Winter habitats are crucial for ensuring population stability. Therefore, we used certain methods, such as factor screening and model parameter optimization to assess habitat suitability using multi-scale species distribution models. The optimized results show that suitable habitats overlap with areas of high vegetation coverage in the Helan Mountains, covering just 588.32 km², which is less than a quarter of the reserve’s total area. The bare land area and winter NDVI are the two primary factors influencing habitat suitability, with other factors having minimal impact, underscoring the critical importance of food resources for the Alashan wapiti. The limited availability of these resources poses significant conservation challenges. Our findings provide a more precise foundation for targeted habitat protection and restoration efforts. We recommend enhancing the protection and restoration of food resources, effectively conserving vegetated areas, and preventing desertification.

This study focuses on the Siberian roe deer population in the Greater Khingan Mountains, Northeast China. The cold temperate forest ecosystem in this area is distinctive. The Siberian roe deer is a crucial ecological indicator species, and its living conditions hold significant importance for ecological balance. From the winter of 2019 to 2022, 269 fecal samples of Siberian roe deer were collected from four protected areas in the northern part of the Greater Khingan Mountains, Heilongjiang Province. These samples were comprehensively analyzed using mitochondrial DNA and microsatellite markers, combined with conservation genetics evaluation methods. The results revealed that 244 individuals were identified in the fecal samples. The results of a Cyt b genetic analysis of the samples indicated that the haplotype and nucleotide diversity were 88.1% and 20.3%, respectively. The evaluation of 14 pairs of microsatellite loci showed that the average number of alleles was 11.2, and the average expected and observed heterozygosity were 0.672 and 0.506, respectively. Therefore, the overall genetic diversity level is high, but some populations of Siberian roe deer are at risk. AMOVA analysis and STRUCTURE Bayesian clustering confirmed the existence of obvious genetic differentiation among the populations. Historical studies have shown that the HZ and SH populations underwent the earliest diffusion events, and the BJC and SL populations also exhibited related signs (HZ: Huzhong Nature Reserve in the Greater Khingan Mountains; SH: Shuanghe National Nature Reserve in Heilongjiang Province; BJC: Heilongjiang Beijicun National Nature Reserve; SL: Songling District in Heilongjiang Province). Mismatch distribution and neutral tests indicated no expansion events or bottleneck effects in the population, and the inbreeding coefficient was positive, suggesting the possibility of inbreeding. The development potential of the population in the future varies among the various local populations. This study supports the biodiversity of Siberian roe deer at the genetic level to save the population and provides important scientific basis and reference for the protection and management of Siberian roe deer.