Vadim Ushakov

Dr. Vadim Ushakov


Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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25 October 2016 in Frontiers in Human Neuroscience
Verified
Journal Article
Open access
VUVadim Ushakov
Vadim Ushakov
MSMaksim G. Sharaev
Maksim G. Sharaev
SKSergey I. Kartashov
Sergey I. Kartashov
VZViktoria V. Zavyalova
Viktoria V. Zavyalova
VVVitaliy M. Verkhlyutov
Vitaliy M. Verkhlyutov
BVBoris M. Velichkovsky
Boris M. Velichkovsky
The purpose of this paper was to study causal relationships between left and right hippocampal regions (LHIP and RHIP, respectively) within the default mode network (DMN) as represented by its key structures: the medial prefrontal cortex (MPFC), posterior cingulate cortex (PCC) and the inferior parietal cortex of left (LIPC) and right (RIPC) hemispheres. Furthermore, we were interested in testing the stability of the connectivity patterns when adding or deleting regions of interest. The functional magnetic resonance imaging (fMRI) data from a group of 30 healthy right-handed subjects in the resting state were collected and a connectivity analysis was performed. To model the effective connectivity, we used the spectral Dynamic Causal Modeling (DCM). Three DCM analyses were completed. Two of them modeled interaction between five nodes that included four DMN key structures in addition to either LHIP or RHIP. The last DCM analysis modeled interactions between four nodes whereby one of the main DMN structures, PCC, was excluded from the analysis. The results of all DCM analyses indicated a high level of stability in the computational method: those parts of the winning models that included the key DMN structures demonstrated causal relations known from recent research. However, we discovered new results as well. First of all, we found a pronounced asymmetry in LHIP and RHIP connections. LHIP demonstrated a high involvement of DMN activity with preponderant information outflow to all other DMN regions. Causal interactions of LHIP were bidirectional only in the case of LIPC. On the contrary, RHIP was primarily affected by inputs from LIPC, RIPC and LHIP without influencing these or other DMN key structures. For the first time, an inhibitory link was found from MPFC to LIPC, which may indicate the subjects’ effort to maintain a resting state. Functional connectivity data echoed these results, though they also showed links not reflected in the patterns of effective connectivity. We suggest that such lateralized architecture of hippocampal connections may be related to lateralization phenomena in verbal and spatial domains documented in human neurophysiology, neuropsychology and neurolinguistics.

8 July 2020 in Schizophrenia Bulletin
Verified
Journal Article
Open access
PDF file
MAMarie Arsalidou
Marie Arsalidou
ZYZachary Yaple
Zachary Yaple
TJTomas Jurcik
Tomas Jurcik
VUVadim Ushakov
Vadim Ushakov
Deficits in cognitive function are a major characteristic of schizophrenia. Many functional magnetic resonance imaging (fMRI) studies examine brain correlates of cognitive function in adults with schizophrenia, showing altered implication of associative areas such as the prefrontal cortex and temporal cortex. fMRI studies also examine brain representation of cognitive function in adolescents with early onset schizophrenia and those at risk of the disorder, yet results are often inconsistent. We compile and analyze data from eligible fMRI studies using quantitative meta-analyses to reveal concordant brain activity associated with adolescent relatives of patients with schizophrenia and those with early onset schizophrenia. Results show similar functional hubs of brain activity (eg, precuneus) yet in opposite hemispheres and clusters in ventrolateral rather than dorsolateral prefrontal cortices. Other areas of altered implication include the middle temporal gyrus, insula, and cerebellum. We discuss the findings in reference to the protracted maturation of the prefrontal cortex and possible effects due to the medication status of the two groups.

15 December 2022 in PLOS ONE
Verified
Journal Article
Open access
PDF file
VKVictor Karpychev
Victor Karpychev
TBTatyana Bolgina
Tatyana Bolgina
SMSvetlana Malyutina
Svetlana Malyutina
VZVictoria Zinchenko
Victoria Zinchenko
VUVadim Ushakov
Vadim Ushakov
ODOlga Dragoy
Olga Dragoy
Language lateralization is the most intriguing trait of functional asymmetry for cognitive functions. Nowadays, ontogenetic determinants of this trait are largely unknown, but there are efforts to find its anatomical correlates. In particular, a white matter interhemispheric connection–the corpus callosum–has been proposed as such. In the present study, we aimed to find the association between the degree of language lateralization and metrics of the callosal sub-regions. We applied a sentence completion fMRI task to measure the degree of language lateralization in a group of healthy participants balanced for handedness. We obtained the volumes and microstructural properties of callosal sub-regions with two tractography techniques,diffusion tensor imaging (DTI)andconstrained spherical deconvolution (CSD). The analysis of DTI-based metrics did not reveal any significant associations with language lateralization. In contrast, CSD-based analysis revealed that the volumes of a callosal sub-region terminating in the core posterior language-related areas predict a stronger degree of language lateralization. This finding supports the specific inhibitory model implemented through the callosal fibers projecting into the core posterior language-related areas in the degree of language lateralization, with no relevant contribution of other callosal sub-regions.

4 October 2020 in Cells
Verified
Journal Article
Open access
PDF file
Artem NedoluzhkoArtem Nedoluzhko
Artem Nedoluzhko
NGNatalia Gruzdeva
Natalia Gruzdeva
FSFedor Sharko
Fedor Sharko
SRSergey Rastorguev
Sergey Rastorguev
NZNatalia Zakharova
Natalia Zakharova
VUVadim Ushakov
Vadim Ushakov
Circular RNAs (circRNAs) are endogenous, single-stranded, most frequently non-coding RNA (ncRNA) molecules that play a significant role in gene expression regulation. Circular RNAs can affect microRNA functionality, interact with RNA-binding proteins (RBPs), translate proteins by themselves, and directly or indirectly modulate gene expression during different cellular processes. The affected expression of circRNAs, as well as their targets, can trigger a cascade of events in the genetic regulatory network causing pathological conditions. Recent studies have shown that altered circular RNA expression patterns could be used as biomarkers in psychiatric diseases, including schizophrenia (SZ); moreover, circular RNAs together with other cell molecules could provide new insight into mechanisms of this disorder. In this review, we focus on the role of circular RNAs in the pathogenesis of SZ and analyze their biomarker and therapeutic potential in this disorder.

18 April 2021
Verified
Book Chapter
Closed access
PDF file
VDVladimir Dorokhov
Vladimir Dorokhov
OTOlga N. Tkachenko
Olga N. Tkachenko
VUVadim Ushakov
Vadim Ushakov
ACAlexsander M. Chernorizov
Alexsander M. Chernorizov

1 January 2018 in Procedia Computer Science
Verified
Journal Article
Open access
MSMaksim Sharaev
Maksim Sharaev
VOVyacheslav Orlov
Vyacheslav Orlov
VUVadim Ushakov
Vadim Ushakov
Boris M. VelichkovskyBoris M. Velichkovsky
Boris M. Velichkovsky
The performance of the human brain depends on how effectively its distinct regions communicate, especially the regions which are more strongly connected to each other than to other regions, or so called “rich-clubs”. The aim of the current work is to find a connectivity pattern between the three brain rich-club regions without any a priori assumptions on the underlying network architecture. Rich-clubs for the analysis were previously identified with structural MRI. Functional magnetic resonance imaging (fMRI) data from 25 healthy subjects (1000 time points from each one) was acquired and Transfer Entropy (TE) between fMRI time-series from rich-clubs was calculated. The significant results at the group level were obtained by testing against the surrogate data generated on a novel approach. We found stable causal interactions between rostral Anterior Cingulate Cortex L and Dorsal Anterior Cingulate Cortex L, dorsal Anterior Cingulate Cortex L and Paracentral Lobule R but not vice versa. Our work provides an approach to causal analysis of experimental data and demonstrates the applicability to real fMRI study.