Ziming Wu

Ziming Wu


Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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24 November 2022 in Frontiers in Plant Science
Verified
Journal Article
Open access
ARAdnan Rasheed
Adnan Rasheed
HLHuijie Li
Huijie Li
MTMajid M. Tahir
Majid M. Tahir
AMAthar Mahmood
Athar Mahmood
MNMuhammad Nawaz
Muhammad Nawaz
ZWZiming Wu
Ziming Wu
Drought stress (DS) is a serious challenge for sustaining global crop production and food security. Nanoparticles (NPs) have emerged as an excellent tool to enhance crop production under current rapid climate change and increasing drought intensity. DS negatively affects plant growth, physiological and metabolic processes, and disturbs cellular membranes, nutrient and water uptake, photosynthetic apparatus, and antioxidant activities. The application of NPs protects the membranes, maintains water relationship, and enhances nutrient and water uptake, leading to an appreciable increase in plant growth under DS. NPs protect the photosynthetic apparatus and improve photosynthetic efficiency, accumulation of osmolytes, hormones, and phenolics, antioxidant activities, and gene expression, thus providing better resistance to plants against DS. In this review, we discuss the role of different metal-based NPs to mitigate DS in plants. We also highlighted various research gaps that should be filled in future research studies. This detailed review will be an excellent source of information for future researchers to adopt nanotechnology as an eco-friendly technique to improve drought tolerance.

Verified
Journal Article
Open access
PDF file
ARAdnan Rasheed
Adnan Rasheed
RGRafaqat Ali Gill
Rafaqat Ali Gill
Muhammad Umair HassanMuhammad Umair Hassan
Muhammad Umair Hassan
AMAthar Mahmood
Athar Mahmood
Sameer QariSameer Qari
Sameer Qari
ZWZiming Wu
Ziming Wu
Genome editing (GE) has revolutionized the biological sciences by creating a novel approach for manipulating the genomes of living organisms. Many tools have been developed in recent years to enable the editing of complex genomes. Therefore, a reliable and rapid approach for increasing yield and tolerance to various environmental stresses is necessary to sustain agricultural crop production for global food security. This critical review elaborates the GE tools used for crop improvement. These tools include mega-nucleases (MNs), such as zinc-finger nucleases (ZFNs), and transcriptional activator-like effector nucleases (TALENs), and clustered regularly interspaced short palindromic repeats (CRISPR). Specifically, this review addresses the latest advancements in the role of CRISPR/Cas9 for genome manipulation for major crop improvement, including yield and quality development of biotic stress- and abiotic stress-tolerant crops. Implementation of this technique will lead to the production of non-transgene crops with preferred characteristics that can result in enhanced yield capacity under various environmental stresses. The CRISPR/Cas9 technique can be combined with current and potential breeding methods (e.g., speed breeding and omics-assisted breeding) to enhance agricultural productivity to ensure food security. We have also discussed the challenges and limitations of CRISPR/Cas9. This information will be useful to plant breeders and researchers in the thorough investigation of the use of CRISPR/Cas9 to boost crops by targeting the gene of interest.

4 January 2023 in Frontiers in Genetics
Verified
Journal Article
Open access
ARAdnan Rasheed
Adnan Rasheed
MIMuhammad Ilyas
Muhammad Ilyas
TKTaj Naseeb Khan
Taj Naseeb Khan
AMAthar Mahmood
Athar Mahmood
URUsama Riaz
Usama Riaz
SQSameer H. Qari
Sameer H. Qari
Tomato is one of the most significant vegetable crops, which provides several important dietary components. Pakistan has a significant low tomato yield compared to other countries because of low genetic diversity and the absence of improved cultivars. The present study aimed to investigate the genetic variability, heritability, and genetic advance for yield and yield-related traits in tomato. For this purpose, eight tomato parents and their 15 crosses or hybrids were evaluated to study the relevant traits. Significant variation was observed for all studied traits. Higher values of the genotypic coefficient of variability (GCV) and phenotypic coefficient of variability (PCV) were recorded for yield per plant (YP) (kg) (37.62% and 37.79%), as well as the number of fruits per cluster (NFRC) (31.52% and 31.71%), number of flowers per cluster (24.63 and 24.67), and single fruit weight (g) (23.49 and 23.53), which indicated that the selection for these traits would be fruitful. Higher heritability (h2) estimates were observed for the number of flowers per cluster (NFC) (0.99%), single fruit weight (SFW) (g) (0.99%), and yield per plant (YP) (kg) (0.99%). Single fruit weight (SFW) (g) exhibited higher values for all components of variability. High genetic advance as a % of the mean (GAM) coupled with higher heritability (h2) was noted for the yield per plant (YP) (kg) (52.58%) and the number of fruits per cluster (NFRC) (43.91). NFRC and SFW (g) had a highly significant correlation with YP (kg), while FSPC had a significant positive association with YP (kg), and these traits can be selected to enhance YP (kg). Among the 15 hybrids, Nagina × Continental, Pakit × Continental, and Roma × BSX-935 were selected as high-yielding hybrids for further evaluation and analysis. These findings revealed that the best performing hybrids could be used to enhance seed production and to develop high-yielding varieties. The parents could be further tested to develop hybrids suitable for changing climatic conditions. The selection of YP (kg), SFW (g), NFC, and NFRC would be ideal for selecting the best hybrids.

12 December 2022 in Frontiers in Plant Science
Verified
Journal Article
Open access
SFsheng fang
sheng fang
HYHuiyi Yang
Huiyi Yang
GWGuangwei Wei
Guangwei Wei
TSTinghai Shen
Tinghai Shen
ZWZehua Wan
Zehua Wan
ZWZiming Wu
Ziming Wu
Potassium (K) is known for alleviating the negative effects of abiotic stresses on plants. To explore the functions of K in controlling reactive oxygen species (ROS), antioxidant activities, and osmoregulation in sesame under drought stress, a pot experiment was conducted with three K levels (0, 60, and 120 kg ha–1, recorded as K0, K1, and K2, respectively) and exposed to well-watered (WW, 75% ± 5% soil relative water content) and drought-stressed (DS, 50% ± 5% soil relative water content) conditions. The results showed that DS stimulated the production of ROS such as increased hydrogen peroxide (H2O2), leading to lipid peroxidation as characterized by higher malondialdehyde (MDA) and, consequently, resulting in the decline in relative water content (RWC) and photosynthetic pigments as compared with WW plants. These adverse effects were exacerbated when drought stress was prolonged. Concurrently, K application alleviated the magnitude of decline in the RWC, chlorophyll a, and chlorophyll b, and plants applied with K exhibited superior growth, with the optimal mitigation observed under K2 treatment. Additionally, DS plants treated with K exhibited lower lipid peroxidation, higher antioxidant activities, and increased osmotic solute accumulation in comparison with plants under K deficiency, which suggested that exogenous K application mitigated the oxidative damages and this was more prominent under K2 treatment. Noteworthily, proline and soluble protein, respectively, dominated in the osmotic regulation at 3 and 6 days of drought stress according to the analysis of the quantitative comparison among different osmotically active solutes. Based on the correlation of the aforementioned traits and the analysis of variance on the interaction effects of drought stress and potassium, we propose that superoxide dismutase (SOD), glutathione reductase (GR), and MDA could be critical indicators in balancing ROS detoxification and reproduction. In summary, our studies suggest that optimized K application keeps a balance between the production of antioxidants and ROS and simultaneously affects osmoregulation to alleviate the damage from drought stress.

28 July 2022 in Frontiers in Plant Science
Verified
Journal Article
Open access
ARAdnan Rasheed
Adnan Rasheed
HLHuijie Li
Huijie Li
MNMuhammad Nawaz
Muhammad Nawaz
AMAthar Mahmood
Athar Mahmood
MHMuhammad Umair Hassan
Muhammad Umair Hassan
ZWZiming Wu
Ziming Wu
Improvement of salinity tolerance in rice can minimize the stress-induced yield losses. Rice (Oryza sativa) is one of Asia’s most widely consumed crops, native to the subtropical regions, and is generally associated with sensitivity to salinity stress episodes. Salt-tolerant rice genotypes have been developed using conventional breeding methods; however, the success ratio is limited because of the complex nature of the trait and the high cost of development. The narrow genetic base of rice limited the success of conventional breeding methods. Hence, it is critical to launch the molecular tools for screening rice novel germplasm for salt-tolerant genes. In this regard, the latest molecular techniques like quantitative trait loci (QTL) mapping, genetic engineering (GE), transcription factors (TFs) analysis, and clustered regularly interspaced short palindromic repeats (CRISPR) are reliable for incorporating the salt tolerance in rice at the molecular level. Large-scale use of these potent genetic approaches leads to identifying and editing several genes/alleles, and QTL/genes are accountable for holding the genetic mechanism of salinity tolerance in rice. Continuous breeding practices resulted in a huge decline in rice genetic diversity, which is a great worry for global food security. However, molecular breeding tools are the only way to conserve genetic diversity by exploring wild germplasm for desired genes in salt tolerance breeding programs. In this review, we have compiled the logical evidences of successful applications of potent molecular tools for boosting salinity tolerance in rice, their limitations, and future prospects. This well-organized information would assist future researchers in understanding the genetic improvement of salinity tolerance in rice.

24 May 2022 in BMC Plant Biology
Verified
Journal Article
Open access
PDF file
RSRuqi Su
Ruqi Su
Senouwa Segla Koffi DossouSenouwa Segla Koffi Dossou
Senouwa Segla Koffi Dossou
KDKomivi Dossa
Komivi Dossa
RZRong Zhou
Rong Zhou
ALAili Liu
Aili Liu
Jun YouJun You
Jun You
Background: The adverse effects of climate change on crop production are constraining breeders to develop high-quality environmentally stable varieties. Hence, efforts are being made to identify key genes that could be targeted for enhancing crop tolerance to environmental stresses. ERF transcription factors play an important role in various abiotic stresses in plants. However, the roles of the ERF family in abiotic stresses tolerance are still largely unknown in sesame, the “queen” of oilseed crops. Results: In total, 114 sesame ERF genes (SiERFs) were identified and characterized. 96.49% of the SiERFs were distributed unevenly on the 16 linkage groups of the sesame genome. The phylogenetic analysis with the Arabidopsis ERFs (AtERFs) subdivided SiERF subfamily proteins into 11 subgroups (Groups I to X; and VI-L). Genes in the same subgroup exhibited similar structure and conserved motifs. Evolutionary analysis showed that the expansion of ERF genes in sesame was mainly induced by whole-genome duplication events. Moreover, cis-acting elements analysis showed that SiERFs are mostly involved in environmental responses. Gene expression profiles analysis revealed that 59 and 26 SiERFs are highly stimulated under drought and waterlogging stress, respectively. In addition, qRT-PCR analyses indicated that most of SiERFs are also significantly up-regulated under osmotic, submerge, ABA, and ACC stresses. Among them, SiERF23 and SiERF54 were the most induced by both the abiotic stresses, suggesting their potential for targeted improvement of sesame response to multiple abiotic stresses. Conclusion: This study provides a comprehensive understanding of the structure, classification, evolution, and abiotic stresses response of ERF genes in sesame. Moreover, it offers valuable gene resources for functional characterization towards enhancing sesame tolerance to multiple abiotic stresses.