Christoph Linse

Mr. Christoph Linse

Universität zu Lübeck
orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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11 January 2021 in Sensors
Verified
Journal Article
Open access
PDF file
Hammam AlshazlyHammam Alshazly
Hammam Alshazly
CLChristoph Linse
Christoph Linse
EBErhardt Barth
Erhardt Barth
Thomas MartinetzThomas Martinetz
Thomas Martinetz
This paper explores how well deep learning models trained on chest CT images can diagnose COVID-19 infected people in a fast and automated process. To this end, we adopted advanced deep network architectures and proposed a transfer learning strategy using custom-sized input tailored for each deep architecture to achieve the best performance. We conducted extensive sets of experiments on two CT image datasets, namely, the SARS-CoV-2 CT-scan and the COVID19-CT. The results show superior performances for our models compared with previous studies. Our best models achieved average accuracy, precision, sensitivity, specificity, and F1-score values of 99.4%, 99.6%, 99.8%, 99.6%, and 99.4% on the SARS-CoV-2 dataset, and 92.9%, 91.3%, 93.7%, 92.2%, and 92.5% on the COVID19-CT dataset, respectively. For better interpretability of the results, we applied visualization techniques to provide visual explanations for the models’ predictions. Feature visualizations of the learned features show well-separated clusters representing CT images of COVID-19 and non-COVID-19 cases. Moreover, the visualizations indicate that our models are not only capable of identifying COVID-19 cases but also provide accurate localization of the COVID-19-associated regions, as indicated by well-trained radiologists.

24 September 2019 in Sensors
Verified
Journal Article
Open access
PDF file
Hammam AlshazlyHammam Alshazly
Hammam Alshazly
CLChristoph Linse
Christoph Linse
EBErhardt Barth
Erhardt Barth
Thomas MartinetzThomas Martinetz
Thomas Martinetz
The recognition performance of visual recognition systems is highly dependent on extracting and representing the discriminative characteristics of image data. Convolutional neural networks (CNNs) have shown unprecedented success in a variety of visual recognition tasks due to their capability to provide in-depth representations exploiting visual image features of appearance, color, and texture. This paper presents a novel system for ear recognition based on ensembles of deep CNN-based models and more specifically the Visual Geometry Group (VGG)-like network architectures for extracting discriminative deep features from ear images. We began by training different networks of increasing depth on ear images with random weight initialization. Then, we examined pretrained models as feature extractors as well as fine-tuning them on ear images. After that, we built ensembles of the best models to further improve the recognition performance. We evaluated the proposed ensembles through identification experiments using ear images acquired under controlled and uncontrolled conditions from mathematical analysis of images (AMI), AMI cropped (AMIC) (introduced here), and West Pomeranian University of Technology (WPUT) ear datasets. The experimental results indicate that our ensembles of models yield the best performance with significant improvements over the recently published results. Moreover, we provide visual explanations of the learned features by highlighting the relevant image regions utilized by the models for making decisions or predictions.

8 December 2019 in Symmetry
Verified
Journal Article
Open access
PDF file
Hammam AlshazlyHammam Alshazly
Hammam Alshazly
CLChristoph Linse
Christoph Linse
EBErhardt Barth
Erhardt Barth
Thomas MartinetzThomas Martinetz
Thomas Martinetz
Ear recognition is an active research area in the biometrics community with the ultimate goal to recognize individuals effectively from ear images. Traditional ear recognition methods based on handcrafted features and conventional machine learning classifiers were the prominent techniques during the last two decades. Arguably, feature extraction is the crucial phase for the success of these methods due to the difficulty in designing robust features to cope with the variations in the given images. Currently, ear recognition research is shifting towards features extracted by Convolutional Neural Networks (CNNs), which have the ability to learn more specific features robust to the wide image variations and achieving state-of-the-art recognition performance. This paper presents and compares ear recognition models built with handcrafted and CNN features. First, we experiment with seven top performing handcrafted descriptors to extract the discriminating ear image features and then train Support Vector Machines (SVMs) on the extracted features to learn a suitable model. Second, we introduce four CNN based models using a variant of the AlexNet architecture. The experimental results on three ear datasets show the superior performance of the CNN based models by 22%. To further substantiate the comparison, we perform visualization of the handcrafted and CNN features using the t-distributed Stochastic Neighboring Embedding (t-SNE) visualization technique and the characteristics of features are discussed. Moreover, we conduct experiments to investigate the symmetry of the left and right ears and the obtained results on two datasets indicate the existence of a high degree of symmetry between the ears, while a fair degree of asymmetry also exists.

14 September 2020 in IEEE Access
Verified
Journal Article
Open access
Hammam AlshazlyHammam Alshazly
Hammam Alshazly
CLChristoph Linse
Christoph Linse
EBErhardt Barth
Erhardt Barth
Thomas MartinetzThomas Martinetz
Thomas Martinetz
This paper employs state-of-the-art Deep Convolutional Neural Networks (CNNs), namely AlexNet, VGGNet, Inception, ResNet and ResNeXt in a first experimental study of ear recognition on the unconstrained EarVN1.0 dataset. As the dataset size is still insufficient to train deep CNNs from scratch, we utilize transfer learning and propose different domain adaptation strategies. The experiments show that our networks, which are fine-tuned using custom-sized inputs determined specifically for each CNN architecture, obtain state-of-the-art recognition performance where a single ResNeXt101 model achieves a rank-1 recognition accuracy of 93.45%. Moreover, we achieve the best rank-1 recognition accuracy of 95.85% using an ensemble of fine-tuned ResNeXt101 models. In order to explain the performance differences between models and make our results more interpretable, we employ the t-SNE algorithm to explore and visualize the learned features. Feature visualizations show well-separated clusters representing ear images of the different subjects. This indicates that discriminative and ear-specific features are learned when applying our proposed learning strategies.

31 August 2021 in IEEE Access
Verified
Journal Article
Open access
Hammam AlshazlyHammam Alshazly
Hammam Alshazly
CLChristoph Linse
Christoph Linse
EBErhardt Barth
Erhardt Barth
SISahar Ahmed Idris
Sahar Ahmed Idris
Thomas MartinetzThomas Martinetz
Thomas Martinetz
This paper presents ear recognition models constructed with Deep Residual Networks (ResNet) of various depths. Due to relatively limited amounts of ear images we propose three different transfer learning strategies to address the ear recognition problem. This is done either through utilizing the ResNet architectures as feature extractors or through employing end-to-end system designs. First, we use pretrained models trained on specific visual recognition tasks, inititalize the network weights and train the fully-connected layer on the ear recognition task. Second, we fine-tune entire pretrained models on the training part of each ear dataset. Third, we utilize the output of the penultimate layer of the fine-tuned ResNet models as feature extractors to feed SVM classifiers. Finally, we build ensembles of networks with various depths to enhance the overall system performance. Extensive experiments are conducted to evaluate the obtained models using ear images acquired under constrained and unconstrained imaging conditions from the AMI, AMIC, WPUT and AWE ear databases. The best performance is obtained by averaging ensembles of fine-tuned networks achieving recognition accuracy of 99.64%, 98.57%, 81.89%, and 67.25% on the AMI, AMIC, WPUT, and AWE databases, respectively. In order to facilitate the interpretation of the obtained results and explain the performance differences on each ear dataset we apply the powerful Guided Grad-CAM technique, which provides visual explanations to unravel the black-box nature of deep models. The provided visualizations highlight the most relevant and discriminative ear regions exploited by the models to differentiate between individuals. Based on our analysis of the localization maps and visualizations we argue that our models make correct prediction when considering the geometrical structure of the ear shape as a discriminative region even with a mild degree of head rotations and the presence of hair occlusion and accessories. However, severe head movements and low contrast images have a negative impact of the recognition performance.

18 August 2022 in Neural Computing and Applications
Verified
Journal Article
Open access
PDF file
CLChristoph Linse
Christoph Linse
Hammam AlshazlyHammam Alshazly
Hammam Alshazly
Thomas MartinetzThomas Martinetz
Thomas Martinetz
Within the last decade Deep Learning has become a tool for solving challenging problems like image recognition. Still, Convolutional Neural Networks (CNNs) are considered black-boxes, which are difficult to understand by humans. Hence, there is an urge to visualize CNN architectures, their internal processes and what they actually learn. Previously, virtual realityhas been successfully applied to display small CNNs in immersive 3D environments. In this work, we address the problem how to feasibly render large-scale CNNs, thereby enabling the visualization of popular architectures with ten thousands of feature maps and branches in the computational graph in 3D. Our software ”DeepVisionVR” enables the user to freely walk through the layered network, pick up and place images, move/scale layers for better readability, perform feature visualization and export the results. We also provide a novel Pytorch module to dynamically link PyTorch with Unity, which gives developers and researchers a convenient interface to visualize their own architectures. The visualization is directly created from the PyTorch class that defines the Pytorch model used for training and testing. This approach allows full access to the network’s internals and direct control over what exactly is visualized. In a use-case study, we apply the module to analyze models with different generalization abilities in order to understand how networks memorize images. We train two recent architectures, CovidResNet and CovidDenseNet on the Caltech101 and the SARS-CoV-2 datasets and find that bad generalization is driven by high-frequency features and the susceptibility to specific pixel arrangements, leading to implications for the practical application of CNNs. The code is available on Github https://github.com/Criscraft/DeepVisionVR.