Veronika Subjakova

Dr. Veronika Subjakova

Comenius University

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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21 January 2021 in Polymers
Verified
Journal Article
Open access
PDF file
VSVeronika Subjakova
Veronika Subjakova
VOVeronika Oravczová
Veronika Oravczová
Tibor HianikTibor Hianik
Tibor Hianik
Polymer nanoparticles and nano/micromotors are novel nanostructures that are of increased interest especially in the diagnosis and therapy of cancer. These structures are modified by antibodies or nucleic acid aptamers and can recognize the cancer markers at the membrane of the cancer cells or in the intracellular side. They can serve as a cargo for targeted transport of drugs or nucleic acids in chemo- immuno- or gene therapy. The various mechanisms, such as enzyme, ultrasound, magnetic, electrical, or light, served as a driving force for nano/micromotors, allowing their transport into the cells. This review is focused on the recent achievements in the development of polymer nanoparticles and nano/micromotors modified by antibodies and nucleic acid aptamers. The methods of preparation of polymer nanoparticles, their structure and properties are provided together with those for synthesis and the application of nano/micromotors. The various mechanisms of the driving of nano/micromotors such as chemical, light, ultrasound, electric and magnetic fields are explained. The targeting drug delivery is based on the modification of nanostructures by receptors such as nucleic acid aptamers and antibodies. Special focus is therefore on the method of selection aptamers for recognition cancer markers as well as on the comparison of the properties of nucleic acid aptamers and antibodies. The methods of immobilization of aptamers at the nanoparticles and nano/micromotors are provided. Examples of applications of polymer nanoparticles and nano/micromotors in targeted delivery and in controlled drug release are presented. The future perspectives of biomimetic nanostructures in personalized nanomedicine are also discussed.

6 August 2023 in Chemosensors
Verified
Journal Article
Open access
PDF file
LBLeda Bousiakou
Leda Bousiakou
OAOmar Al-Dossary
Omar Al-Dossary
Anastasios EconomouAnastasios Economou
Anastasios Economou
VSVeronika Subjakova
Veronika Subjakova
Tibor HianikTibor Hianik
Tibor Hianik
Aptamers are synthetic single-stranded oligonucleotides that exhibit selective binding properties to specific targets, thereby providing a powerful basis for the development of selective and sensitive (bio)chemical assays. Electrochemical biosensors utilizing aptamers as biological recognition elements, namely aptasensors, are at the forefront of current research. They exploit the combination of the unique properties of aptamers with the advantages of electrochemical detection with the view to fabricate inexpensive and portable analytical platforms for rapid detection in point-of-care (POC) applications or for on-site monitoring. The immobilization of aptamers on suitable substrates is of paramount importance in order to preserve their functionality and optimize the sensors’ sensitivity. This work describes different immobilization strategies for aptamers on the surface of semiconductor-based working electrodes, including metal oxides, conductive polymers, and carbon allotropes. These are presented as platforms with tunable band gaps and various surface morphologies for the preparation of low cost, highly versatile aptasensor devices in analytical chemistry. A survey of the current literature is provided, discussing each analytical method. Future trends are outlined which envisage aptamer-based biosensing using semiconductors.

9 February 2023 in Biosensors
Verified
Journal Article
Open access
PDF file
MTMarek Tatarko
Marek Tatarko
SSSandro Spagnolo
Sandro Spagnolo
MCMartin Csiba
Martin Csiba
VSVeronika Subjakova
Veronika Subjakova
Tibor HianikTibor Hianik
Tibor Hianik
We analyzed the possibility of the detection of cytochrome c (cyt c) being physically adsorbed on lipid films or covalently bounded to 11-mercapto-1-undecanoic acid (MUA) chemisorbed on the gold layer using quartz crystal microbalance with dissipation monitoring (QCM-D). The negatively charged lipid film composed of a mixture of zwitterionic DMPC and negatively charged DMPG phospholipids at a molar ratio of 1:1 allowed the formation of a stable cyt c layer. Addition of DNA aptamers specific to cyt c, however, resulted in removal of cyt c from the surface. The interaction of cyt c with the lipid film and its removal by DNA aptamers were accompanied by changes in viscoelastic properties evaluated using the Kelvin–Voigt model. Cyt c covalently bound to MUA also provided a stable protein layer already at its relatively low concentrations (0.5 μM). A decrease in the resonant frequency following the addition of gold nanowires (AuNWs) modified by DNA aptamers was observed. The interaction of aptamers with cyt c on the surface can be a combination of specific and non-specific interactions due to electrostatic forces between negatively charged DNA aptamers and positively charged cyt c.

12 November 2021 in Biomedicines
Verified
Journal Article
Open access
PDF file
ŠŠŠimon Šutý
Šimon Šutý
VOVeronika Oravczova
Veronika Oravczova
ZGZuzana Garaiova
Zuzana Garaiova
VSVeronika Subjakova
Veronika Subjakova
Maksim IonovMaksim Ionov
Maksim Ionov
IWIveta Waczulíková
Iveta Waczulíková
Dendrons are branched synthetic polymers suitable for preparation of nanosized drug delivery systems. Their interactions with biological systems are mainly predetermined by their chemical structure, terminal groups, surface charge, and the number of branched layers (generation). Any new compound intended to be used, alone or in combination, for medical purposes in humans must be compatible with blood. This study combined results from in vitro experiments on human blood and from laboratory experiments designed to assess the effect of amphiphilic phosphorous dendrons on blood components and model membranes, and to examine the presence and nature of interactions leading to a potential safety concern. The changes in hematological and coagulation parameters upon the addition of dendrons in the concentration range of 2–10 µM were monitored. We found that only the combination of higher concentration and higher generation of the dendron affected the selected clinically relevant parameters: it significantly decreased platelet count and plateletcrit, shortened thrombin time, and increased activated partial thromboplastin time. At the same time, occasional small-sized platelet clumps in blood films under the light microscope were observed. We further investigated aggregation propensity of the positively charged dendrons in model conditions using zwitterionic and negatively charged liposomes. The observed changes in size and zeta potential indicated the electrostatic nature of the interaction. Overall, we proved that the low-generation amphiphilic phosphorous dendrons were compatible with blood within the studied concentration range. However, interactions between high-generation dendrons at bulk concentrations above 10 µM and platelets and/or clotting factors cannot be excluded.

15 June 2023 in Preprints.org
Verified
Preprint
Open access
PDF file
LBLeda Bousiakou
Leda Bousiakou
OAOmar Al-Dossary
Omar Al-Dossary
AEAnastasios Economou
Anastasios Economou
VSVeronika Subjakova
Veronika Subjakova
Tibor HianikTibor Hianik
Tibor Hianik
Aptamers are synthetic single stranded oligonucleotides that exhibit selective binding properties to specific targets, thereby providing as powerful basis for the development of selective and sensitive (bio)chemical assays, such as biosensors. Electrochemical biosensors, utilizing aptamers as biological recognition elements, namely aptasensors, are at the forefront of current research. They exploit the combination of the unique properties of aptamers with the advantages of electrochemical detection with the view to fabricate inexpensive and portable analytical platforms for rapid detection in point-of-care (POC) applications or on-site monitoring. The immobilization of aptamers on suitable substrates is of paramount importance with the aim to retain their functionality and optimize the sensors’ sensitivity. This work describes different immobilization strategies for aptamers on the surface of semiconductor-based working electrodes, including metal oxides, conductive polymers and carbon allotropes. These are presented as platforms with tunable band gaps and different surface morphologies for the preparation of low cost, highly versatile aptasensor devices in analytical chemistry. A survey of the current literature is provided, discussing each analytical method. Future trends envisage for aptamer-based biosensing using semiconductors are also outlined.

12 June 2023 in Engineering Proceedings
Verified
Conference Paper
Open access
PDF file
MTMarek Tatarko
Marek Tatarko
SSSandro Spagnolo
Sandro Spagnolo
MCMartin Csiba
Martin Csiba
VSVeronika Subjakova
Veronika Subjakova
Tibor HianikTibor Hianik
Tibor Hianik
Cytochrome c (cyt c) is an important indicator of cell apoptosis and can, therefore, be used for the diagnosis of cancer. We performed a comparative analysis of cyt c detection on the surface of lipid films or a monolayer of 11-mercaptoundecanoic acid (MUA) with immobilized specific or nonspecific DNA aptamers. A quartz crystal microbalance with dissipation monitoring (QCM-D) in a multiharmonic mode was used to study the interaction of cyt c with various surfaces. For this purpose, changes in the resonant frequency, Δf, and dissipation, ΔD, were determined. The strongest interaction of cyt c was observed with sensors based on specific DNA aptamers that were accompanied by a decrease in frequency and an increase in dissipation. The limit of detection (LOD) for this aptasensor was established as 2.89 ± 0.12 nM. The interaction of cyt c with supported lipid films also resulted in a decrease in resonant frequency, but significant changes occurred only in the µM concentration range of cyt c. Changes in dissipation were much lower in comparison with aptamer-based surfaces, which suggests a weaker contribution of cyt c adsorption to the viscosity.