Matic Kisovec

Dr. Matic Kisovec

National Institute of Chemistry, Ljubljana, Slovenia
orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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12 May 2016 in Nature Communications
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Journal Article
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MPMarjetka Podobnik
Marjetka Podobnik
PSPeter Savory
Peter Savory
NRNejc Rojko
Nejc Rojko
MKMatic Kisovec
Matic Kisovec
NWNeil Wood
Neil Wood
GAGregor Anderluh
Gregor Anderluh
The invertebrate cytolysin lysenin is a member of the aerolysin family of pore-forming toxins that includes many representatives from pathogenic bacteria. Here we report the crystal structure of the lysenin pore and provide insights into its assembly mechanism. The lysenin pore is assembled from nine monomers via dramatic reorganization of almost half of the monomeric subunit structure leading to a β-barrel pore ∼10 nm long and 1.6–2.5 nm wide. The lysenin pore is devoid of additional luminal compartments as commonly found in other toxin pores. Mutagenic analysis and atomic force microscopy imaging, together with these structural insights, suggest a mechanism for pore assembly for lysenin. These insights are relevant to the understanding of pore formation by other aerolysin-like pore-forming toxins, which often represent crucial virulence factors in bacteria.

8 April 2015 in Scientific Reports
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Journal Article
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MPMarjetka Podobnik
Marjetka Podobnik
MMMarta Marchioretto
Marta Marchioretto
MZManuela Zanetti
Manuela Zanetti
ABAndrej Bavdek
Andrej Bavdek
MKMatic Kisovec
Matic Kisovec
GAGregor Anderluh
Gregor Anderluh
Pore formation of cellular membranes is an ancient mechanism of bacterial pathogenesis that allows efficient damaging of target cells. Several mechanisms have been described, however, relatively little is known about the assembly and properties of pores. Listeriolysin O (LLO) is a pH-regulated cholesterol-dependent cytolysin from the intracellular pathogen Listeria monocytogenes, which forms transmembrane β-barrel pores. Here we report that the assembly of LLO pores is rapid and efficient irrespective of pH. While pore diameters at the membrane surface are comparable at either pH 5.5 or 7.4, the distribution of pore conductances is significantly pH-dependent. This is directed by the unique residue H311, which is also important for the conformational stability of the LLO monomer and the rate of pore formation. The functional pores exhibit variations in height profiles and can reconfigure significantly by merging to other full pores or arcs. Our results indicate significant plasticity of large β-barrel pores, controlled by environmental cues like pH.

19 June 2017 in Philosophical Transactions of the Royal Society B: Biological Sciences
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Journal Article
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MPMarjetka Podobnik
Marjetka Podobnik
MKMatic Kisovec
Matic Kisovec
GAGregor Anderluh
Gregor Anderluh
Aerolysin-like pore-forming proteins are an important family of proteins able to efficiently damage membranes of target cells by forming transmembrane pores. They are characterized by a unique domain organization and mechanism of action that involves extensive conformational rearrangements. Although structures of soluble forms of many different members of this family are well understood, the structures of pores and their mechanism of assembly have been described only recently. The pores are characterized by well-defined β-barrels, which are devoid of any vestibular regions commonly found in other protein pores. Many members of this family are bacterial toxins; therefore, structural details of their transmembrane pores, as well as the mechanism of pore formation, are an important base for future drug design. Stability of pores and other properties, such as specificity for some cell surface molecules, make this family of proteins a useful set of molecular tools for molecular recognition and sensing in cell biology. This article is part of the themed issue ‘Membrane pores: from structure and assembly, to medicine and technology’.

6 May 2014
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GAGregor Anderluh
Gregor Anderluh
MKMatic Kisovec
Matic Kisovec
Nada KraševecNada Kraševec
Nada Kraševec
RGRobert J. C. Gilbert
Robert J. C. Gilbert

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KTKaja Troha
Kaja Troha
Domen VozelDomen Vozel
Domen Vozel
MAMatevž Arko
Matevž Arko
AZApolonija Bedina Zavec
Apolonija Bedina Zavec
DDDrago Dolinar
Drago Dolinar
Veronika Kralj-IglicVeronika Kralj-Iglic
Veronika Kralj-Iglic
The preparation of autologous platelet and extracellular vesicle-rich plasma (PVRP) has been explored in many medical fields with the aim to benefit from its healing potential. In parallel, efforts are being invested to understand the function and dynamics of PVRP that is complex in its composition and interactions. Some clinical evidence reveals beneficial effects of PVRP, while some report that there were no effects. To optimize the preparation methods, functions and mechanisms of PVRP, its constituents should be better understood. With the intention to promote further studies of autologous therapeutic PVRP, we performed a review on some topics regarding PVRP composition, harvesting, assessment and preservation, and also on clinical experience following PVRP application in humans and animals. Besides the acknowledged actions of platelets, leukocytes and different molecules, we focus on extracellular vesicles that were found abundant in PVRP.

17 October 2019 in Journal of Nanobiotechnology
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IPIsmael Plaza-Ga
Ismael Plaza-Ga
VMVanesa Manzaneda-González
Vanesa Manzaneda-González
MKMatic Kisovec
Matic Kisovec
VAVictor G. Almendro-Vedia
Victor G. Almendro-Vedia
Mónica Muñoz ÚbedaMónica Muñoz Úbeda
Mónica Muñoz Úbeda
IMIván López Montero
Iván López Montero
Background: A major bottleneck in drug delivery is the breakdown and degradation of the delivery system through the endosomal/lysosomal network of the host cell, hampering the correct delivery of the drug of interest. In nature, the bacterial pathogenListeria monocytogeneshas developed a strategy to secrete Listeriolysin O (LLO) toxin as a tool to escape the eukaryotic lysosomal system upon infection, allowing it to grow and proliferate unharmed inside the host cell.Results: As a “proof of concept”, we present here the use of purified His-LLO H311A mutant protein and its conjugation on the surface of gold nanoparticles to promote the lysosomal escape of 40 nm-sized nanoparticles in mouse embryonic fibroblasts. Surface immobilization of LLO was achieved after specific functionalization of the nanoparticles with nitrile acetic acid, enabling the specific binding of histidine-tagged proteins.Conclusions: Endosomal acidification leads to release of the LLO protein from the nanoparticle surface and its self-assembly into a 300 Å pore that perforates the endosomal/lysosomal membrane, enabling the escape of nanoparticles.